Sinocyclocheilus rhinocerous: 107749919
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Entry
107749919 CDS
T04916
Name
(RefSeq) collagen alpha-1(XXIII) chain-like isoform X1
KO
K24355
collagen type XXIII alpha
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
srx00536
]
107749919
Glycosaminoglycan binding proteins [BR:
srx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107749919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
107749919
NCBI-ProteinID:
XP_016420637
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MPKLVKMVSTGDSKDASKSSQSNGHHTSQIFHCLTTLVCFMLSASSVAVCLFMNVKTSHL
ERKIELLEMERLSVIQPAHATLDANATLRDAIEKLVQERFGEGVSKIRTAREVGQECSCP
PGPPGKRGRKGNPGIPGTPGRDGYPGSMGMDGKPGPLGPNGSQGMPGPKGEKGEQGDMGP
RGPPAYAASAGLLSNQILTVKGDQGQAGPPGPPGTPGPRGPPGNTGRDGPQGHPGKPGPP
GKDGNEGQRGPPGMQGMNGVNGIPGPQGPVGQKGDKGAPGTEGKRGTDGSPGMKGEKGDV
GDPGPQGLPGEKGATGFIENADLAVRLKTLQGPPGPPGEQGPKGEMGLPGAPGPEGKQGH
KGERGDAGEPGAAGAKGEKGDIVLSGPSGEAGQKGDKGDCRLEDNLAQIISMPGPPGPPG
PPGPAGYGLPGPKGEPGESVQGEKGDAGERGPPGQRGLQGFPGSNGLIGLPGAKGEKGKP
GEPGLDGFPGLQGEKGDRGDKGEKGERGSIGKKGLKGQKGEQGPPGLDQPCPVDTSGFRE
HGGEARAPSDAPCPLVQYFFSCVCPHHFDVSILVLGVPLSTTMRSDSQDGLA
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaactggttaaaatggtttcaactggggattcaaaagacgcgtcaaagtcatca
cagagcaatggacatcacacatcacaaatatttcattgtttaacaaccctcgtatgtttc
atgttgtcggcgtcttcggtggcagtttgtctgtttatgaacgtcaaaacatctcatctt
gagcgtaaaattgagcttctggagatggagcgactgtctgtgattcaacctgcgcacgcg
acactggatgcgaacgcgactcttcgggatgcgatagagaaacttgtgcaagagagattc
ggagagggagtgtcgaaaattcgcacagctcgagaagtagggcaagagtgctcgtgtcct
ccaggtcctccaggaaaacggggaagaaaaggcaaccctggaattccaggcactccagga
cgagatggctacccgggttcaatgggtatggatggtaaacctggacctctaggtccaaac
ggcagtcagggaatgccgggaccaaaaggagagaagggtgagcagggagacatgggtccc
aggggaccaccggcctacgctgcttctgcaggcctgctcagtaatcagattctcacggtt
aagggtgatcaaggtcaggctgggcccccaggacctccaggaacacctggtcccagaggg
cctccaggaaacacaggcagagatgggccgcagggccacccaggaaaaccaggtcctcct
ggaaaagatggaaatgagggtcaaagagggccacctggcatgcagggtatgaatggtgtc
aatggcatacctggcccacagggccctgtagggcaaaagggggataagggtgctccaggt
actgaggggaagagagggactgatggatcccctggcatgaagggtgaaaagggagatgtt
ggagatccaggaccccagggtttgcctggagagaaaggagctactggcttcatagaaaat
gctgatctggctgttagactaaaaactctacaggggcctccaggccctccaggagagcaa
gggccaaaaggagaaatgggcttacctggagcaccaggacctgaaggaaagcagggccat
aagggagagagaggtgatgcaggagagcctggagcagcaggagcaaaaggggaaaagggg
gacattgtgctatcagggccttcaggggaagcagggcaaaagggagataaaggagactgt
aggcttgaggacaatctggcccagattatttctatgcctggcccaccagggccaccagga
ccccctgggcctgccggatatggattgcctggacccaagggagagcctggtgagtcagtt
caaggagaaaagggcgacgctggagagagaggtccacctgggcagcggggtcttcaaggc
tttccggggtctaatggcttgataggcctgccaggtgcaaaaggtgaaaagggaaaacca
ggtgaaccaggtttagatggtttcccagggcttcaaggagaaaagggggacagaggagac
aaaggggagaagggtgagagaggctcaataggaaaaaaaggtctgaaaggacagaaggga
gagcaaggacctccagggcttgatcagccttgtcctgtggacaccagtgggtttagagaa
catggtggggaggcaagggctccatcagatgccccctgccctttggtacagtattttttt
tcttgtgtgtgcccacatcatttcgatgtttccatcctggtgcttggggttcccttgtcc
acaaccatgagatctgactctcaggatggcttggcatag
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