Sinocyclocheilus rhinocerous: 107750039
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Entry
107750039 CDS
T04916
Name
(RefSeq) protocadherin-7-like isoform X1
KO
K16498
protocadherin delta 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
107750039
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
srx01009
]
107750039
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
srx04515
]
107750039
Protein phosphatases and associated proteins [BR:
srx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107750039
Cell adhesion molecules [BR:
srx04515
]
Cadherins
Protocadherins
107750039
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
107750039
NCBI-ProteinID:
XP_016420777
LinkDB
All DBs
Position
Unknown
AA seq
1330 aa
AA seq
DB search
MGSRSVGAVHSARCYLVLILQLLTQLPRANSVLRYRVAEEGQDDVHIGNVASDLGLSTSG
IGTGDVTFALESGSEYFKIDNVTGELTTGSKRIDREKLPQCQMIFDENECFLNFEVSVIG
PLQSWVDLFDGRIVVTDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDHRDFGRNGI
DRYELIQDSRDGGSSSRRPANGPTNGNGGDRRRVSETGTSPASRSSVFELQVADTPEGQK
QPQLIVKGPLDREARDSYELVLRVRDGGNPPRSSQALLRVSITDINDNSPRFERAVYEAE
MAENAPPGTPVLQVRATDRDVGVNGQVEYVFGAATESVRRLLRLDEASGWLSVLHRIDRE
EVSQLRFTITARDRGQPPRTDRTTVVLNVRDENDNVPIVEIRKIGRILVRDGAAMVPENV
LVDTPVALVQVSDRDQGENGAVTCTVVGDVPFTLKPAGETALAPPPATDDAFERNKKKYF
LHTSALLDYEATREYSVTIVAVDSGSPSLSSNSSLLVRVVDINDHAPTFAQSLVEVHFAE
NNAPGERVVTVVASDADSGKNAEIAYSLDPSVNGAFYIDADNGDIRATGALDREQREHYE
FRVIARDKGTPSLQGSATVVVQVTDRNDNGPKFVQEVFTFYVKENLLTNSPVGMVTVTDA
DEGENAELSLFVEHDEEEGGEEGKEGKQEVFSIENNTGTIFSSASFDRERRSAYSFRVRA
VDGGEPPRSATATISLFVTDENDNAPSITSPANESYTLLPPASGARTVVRTVTASDGDTG
SNADLRYALVGGNPFRLFEIGSSSGVITLAEPLERRHRGLHRLVVRVNDSGMPSLCATAL
VHVFINESLANATLVDTQVARSLAVPLYMDIAGDPDSERALGKQRLSVAIGVLAGAAAVI
LVILLVVTARQCGAQGKNGYEAGKKEPEEDFFSPQPPPLQAQGTQNERGRKPRRDKHHNG
TAKSERSLYSGIMTVNGCRRGGGDEEEEDEEASSASERIAARYCAAANGDTSSPRLGSRH
HQSSPDLARHYKSSSPLPAVHLQPNSPPVEGKKHQAVQELPPTNTFTGNGNSNADAMSLS
SDQCSDYGCQTVKYSKQPLRRVTFSVVSQTPDQCCYDSGVEDSETPSSKSSSGPGLGSLP
LPEDGYERTTPEGSVGEEEHVENDPRQLPDVALTGKCTQECDEFGHSDTCWMPVQLSPRR
RMEPPQLSTFASPGDNNNNTEDDSDREEDGDGGTDKSSGGSEEVRDSLANGDPLGTLSRR
DPNRNMGDHNRNLLNRKMTSASYDTFSSAGFGRRPDEEDSHPPEVIPLTRTGGDYKTTSC
LTLSRREVYL
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atggggagcaggagcgttggcgcagtgcactccgcgcgctgctacctcgtgcttatcctg
cagctgctgactcagctcccgcgcgccaattcagtgctgcgctaccgcgtggcggaagag
gggcaggacgatgtgcacatcgggaacgtggcttcagacctggggctgtccacctctggg
attgggactggtgatgtcactttcgctttggaatctggctctgaatacttcaaaattgac
aacgtcactggagagcttactacaggcagcaagaggattgacagagagaagctgccgcag
tgtcagatgatatttgacgagaacgagtgctttttgaactttgaagtgtcagtcataggt
cccctgcagagttgggtggatctgtttgatggccgtattgtagtcacagacatcaatgac
aacaccccctcttttccttcaccagtactcacactatctgttgaggagaatcggccaatc
ggcacactctatctccttcccacagccacagaccaccgtgattttggccgcaatggcatt
gatcgctatgagcttatccaggacagtagagatggggggtcatcttcacggcgacctgcg
aacggaccgacaaatgggaatggtggtgaccgaaggagagtgtcagaaacagggacaagt
cctgccagcaggagcagcgtgtttgaactacaagtggccgacacacctgaaggacagaaa
cagcctcagctgatcgtgaaagggcctctggaccgcgaagcacgggattcttatgaactg
gtgctacgggttcgtgatggcggcaacccgccccgctcctcacaagctctgttgcgcgtg
tccatcacagacatcaatgacaacagtccacgttttgaaagagccgtgtatgaagcagaa
atggcagaaaatgccccacctggcacacctgtcctgcaggtgcgggccacagaccgtgac
gtcggcgtgaacgggcaggttgagtatgtgtttggagccgcgacggaatcagtgcggcgc
ctcctgaggttggatgaagcatcaggttggctgagcgttctgcatcgtatagaccgcgag
gaagtttcacagctacgcttcaccatcacagcccgtgaccgtggccaaccacctcgtact
gaccgcactacagttgttctcaacgtcagggatgaaaatgacaatgtaccaatagtagaa
attcgaaaaattggacgaatccttgttcgcgatggtgctgcaatggttccggagaacgtg
ctggtggacactccagtagcattagtgcaggtgtcagaccgcgaccagggagagaatggt
gcggttacctgcactgtggttggagatgtaccattcacactgaaaccggcgggtgagaca
gccctagcacctccaccagccacagacgatgcctttgaacgaaacaaaaagaaatacttt
ctccacacctcagcacttttggattatgaagctactcgtgagtatagtgtcactattgtg
gcagtggactccggtagcccaagcctctcgagtaatagttcccttctggtgcgtgtggtg
gacataaatgaccatgctcccacttttgcccaaagcttagtggaagtgcattttgcagag
aataatgccccaggagaacgagtggtcactgtagtggcgtctgatgcagacagtggcaag
aatgcagagatcgcatactcactggacccatctgttaatggagctttttacattgatgcc
gataacggtgatattcgtgccactggggcactagatagagagcagagggaacactatgaa
tttcgtgtgatagctcgagataaaggcacaccatctctgcagggctctgctactgtcgta
gtccaggttacggacaggaacgacaatggccccaaatttgtccaggaagtcttcacattc
tatgtcaaagagaaccttctcaccaatagccctgtcggcatggtgactgttaccgatgca
gatgaaggtgagaatgcagagttgagtctttttgttgagcatgatgaagaggagggtgga
gaagagggcaaagagggaaagcaagaagttttctccattgaaaataacactggaaccatt
ttttcctctgcatcctttgatcgcgaacgacgtagcgcatactcattccgcgtgcgtgcc
gttgatggtggagaaccgccacggtctgccaccgccaccatctccctgtttgtcactgat
gaaaatgacaacgcgccatccatcacatcacccgctaatgaatcatacaccctcctgcca
cccgctagcggggctcggactgtagtccgcacagtcacagcctccgatggcgacacaggg
tctaatgccgatctccgctacgctctggtaggcggaaacccttttcgtctgtttgagatt
ggctctagtagtggggtcataaccttggcagagcccctagagagaagacacaggggtctg
caccgcttggtggtccgggtcaatgacagtggcatgccttccctttgtgccacagcactg
gtgcatgtcttcatcaatgagagcttggccaatgctacgctggtggatacacaggtggcc
cgcagccttgcagtccccctctatatggatattgcaggtgacccagacagtgagagagct
ttgggtaaacaacgcctgagcgttgccatcggtgtcctggctggtgctgccgccgttatt
ctggtgatccttctggttgtgacagctcgacagtgtggggcacagggtaagaacggctat
gaggctgggaagaaggagccagaagaggactttttcagtccacagcctccccctctacaa
gcccagggcacccaaaatgaacgtgggcgcaaaccacgcagagacaagcatcataacggt
actgccaaatctgagcgttctttatacagtggaattatgacggtgaatggttgcagacgt
gggggaggcgatgaagaagaggaggatgaagaggccagcagtgccagcgagaggattgca
gcacgttattgtgcagcagctaacggagacaccagcagtccaagacttggctcgagacat
caccagtcaagcccagatctggcccgccactacaagtccagctcacctttgcctgcagtg
caccttcagcccaactcaccacccgtggaaggcaagaagcaccaggctgtgcaggaactg
ccccccactaacaccttcactggcaacggcaacagtaatgcagacgccatgtcactcagc
tcagaccaatgctccgattacggctgccaaactgtcaagtacagcaaacagcccctcaga
agagtgacattttctgtggtgagtcagacacctgatcaatgctgctatgatagtggagtg
gaggactctgagacccccagcagcaagagctcctctggacccggactgggatctttaccg
ctgcctgaggacggatatgaaaggacgacaccagaagggagcgtaggcgaggaggagcat
gtggaaaatgaccccaggcagctccctgacgtggctctgacaggaaagtgcacacaagag
tgtgatgagtttggtcactctgacacctgctggatgcccgtgcaactatcaccacggaga
cgcatggaaccaccccaactctccaccttcgcctcgcccggcgataacaacaacaacacg
gaagacgacagcgaccgagaggaagacggagacggaggtacggataagagcagcggagga
agcgaggaggtccgggattcgcttgcaaacggagatccgctcggaacgctcagccgtcgg
gacccgaacaggaacatgggtgatcacaaccgtaatctcctgaaccggaaaatgacctcg
gcatcctacgacacattcagcagcgccggctttggccgccgtccggatgaagaagactca
caccccccagaggtcattccacttacgaggacggggggcgactataagaccacctcgtgc
ctcactctgtctcgcagggaagtgtacctgtga
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