Sinocyclocheilus rhinocerous: 107750321
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Entry
107750321 CDS
T04916
Symbol
ncbp1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03013
Nucleocytoplasmic transport
srx03015
mRNA surveillance pathway
srx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107750321 (ncbp1)
09122 Translation
03013 Nucleocytoplasmic transport
107750321 (ncbp1)
03015 mRNA surveillance pathway
107750321 (ncbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107750321 (ncbp1)
03041 Spliceosome [BR:
srx03041
]
107750321 (ncbp1)
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
107750321 (ncbp1)
Spliceosome [BR:
srx03041
]
Common components
Common spliceosomal components
Cap binding complex
107750321 (ncbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
AAA_11
GBP_C
Vfa1
FapA
MG280
PIN_8
tRNA_bind_2
EMC3_TMCO1
AAA_13
Motif
Other DBs
NCBI-GeneID:
107750321
NCBI-ProteinID:
XP_016421145
UniProt:
A0A673J8Z6
LinkDB
All DBs
Position
Unknown
AA seq
797 aa
AA seq
DB search
MSRRRHSDESDAGSQPHKRRRTSEPIEIEDRLESLICRVGEKSTSSLESNLEGLAGVLEA
DLPNYKSKILRILCAVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKETLKSN
LYSEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDIPQVRSDWYVYVVLSSLPW
IGKELYEKKDVEMDRLLNQIEGYLKRRQKTHVPMLQVWTAEKPHPQEEYLDCLWAQVQKL
KKDRWQERHILRPYIAFDSVLCEALQHNLPPFTPPAHSDDAVYPMPHVVFRMFDYTDAPE
GPVMPGSHSVERFVIEENLHCIIKSHWRERKTCAAQLLSYPGKNKIPLNYHIVEVIFGEL
FQLPSPPHIDVMYTALLIELCKLQPGSLPQVLAQATEMMYMRLDTMNTTCIDRLINWFSH
HLSNFQFRWSWDDWADCLTQDIEKPKPKFVKEVLDKCMRLSYHQRIVDIVPPSFSALIPA
DPVCSYKYGEEADSSLPGLAMATTVGNAIKNRASNEEILIVLKDVPNPNQDDDDDGGDGF
NPLKIEVFLQTLLHLAAKSSSHSFSALAKFHEVLKTLTDSDEGKLHILRVLYEFWRNHPQ
MISVLVDKLVRTQIVDCAAVANWIFSPEMAHDFTRFYVWEILHSTIRKMNKHVQKIQKEL
DEAKVKLEKQHNKKQRDSGDEEDMEKNSEDEEGQLEEQIERLQEKVESAQSEQKNLFLVI
FQRFIMLLTEHLVRCETSGVDINTTWYKNCIERLQQIFLMHHVIIQQYMGTLENLLFTAE
LDHHILAVYQQFCALQL
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggcgaaggcacagcgatgagagtgatgccggctcccagcctcacaaacggagg
aggacgtctgaacccattgagattgaagaccgcttggagtcgctgatatgtcgagtggga
gagaagagtacgtcctccttagagagcaatttggaaggtcttgctggtgtcctggaggcg
gatcttcctaattataaaagcaaaatcctgcgcatcttatgtgctgttgcaaggctttta
ccagagaagttaacggtgtacacaacactagtgggacttctcaacgctcgcaactacaac
tttggaggagagtttgtggaggccatgatccgacaacttaaggagacactaaaatcaaac
ctttactctgaggccgtttacttggtgcgctttctcagtgacctggtgaactgtcatgtc
atcgcggctccatccatggttgctatgtttgagaactttgtcagtgttacgcaggaagaa
gacataccacaggtgcggtctgactggtatgtgtacgttgtgctgtccagtctgccttgg
attggcaaggagctgtatgagaagaaggatgtggaaatggatcgcttgctcaaccaaatt
gagggatatttaaagcggcgtcagaagactcatgttcctatgctgcaggtgtggaccgca
gaaaagccccacccacaggaagagtatctggactgtctctgggctcaggtgcagaagctg
aagaaagaccgctggcaggagcgtcacatcctgcggccttatattgcatttgacagcgtg
ctgtgtgaagccctgcagcacaacctgccccctttcacacctccagcccactctgatgac
gctgtctaccccatgccccacgtcgtcttccgcatgttcgactacactgatgccccagag
gggcctgtgatgcctggaagtcattcagttgagcgctttgtgattgaggagaacctgcac
tgcataatcaagtctcactggagggagagaaagacctgtgctgcccaattgctcagctac
cctggaaaaaacaagattccccttaactaccatattgtggaggtgatatttggtgagtta
ttccagctgccgagtcctcctcacattgatgtcatgtacactgcgttactcattgagctc
tgcaaactgcaaccgggctctttaccacaagttcttgctcaagccacagaaatgatgtat
atgaggctggacacaatgaacacaacctgcatagaccggctcatcaactggttctcccat
catctgagtaacttccagttcagatggagctgggatgactgggctgactgcttgactcaa
gatattgaaaagcctaaacccaagttcgttaaagaggttttggataagtgtatgaggttg
tcgtatcatcagcggatagtggacattgttcctccgagtttctctgccctgatcccggct
gaccctgtgtgcagctataaatatggagaggaggctgacagttcattaccaggattagct
atggcaactacagtgggtaacgctatcaaaaaccgggcatctaatgaggagattcttatt
gttctaaaagatgtccctaatccaaaccaggatgatgatgatgacgggggcgatggcttc
aaccctctaaagattgaagtgttcctgcagacgctgctccatttggctgcgaagtcttcc
agtcattccttcagtgccctggccaagttccatgaggttctgaagacccttacagacagc
gatgaggggaaactgcacatcctcagggttctgtatgagttctggaggaaccatcctcag
atgatctcagtgttggtggacaagctggtacggacccagattgtggactgtgcagctgtg
gccaactggatattttctcccgaaatggctcatgatttcaccaggttttatgtgtgggag
attctacattccaccatccggaagatgaacaaacacgtgcagaagattcagaaagagttg
gatgaggcaaaagtaaagctggagaagcaacacaacaaaaagcagcgggacagcggtgat
gaagaggacatggagaagaacagtgaggatgaggagggtcagttggaggaacagatcgag
aggctgcaggagaaagtagagtcggcccagagcgaacagaagaaccttttccttgttata
ttccagcgcttcattatgttactgacagagcacctggttcgctgtgaaacgagcggcgta
gacatcaacaccacctggtacaagaactgcatcgagaggctacagcagatcttcctcatg
catcatgtgatcatccagcagtatatgggcacccttgagaacctgctgtttactgctgag
ctcgaccatcatatcctggctgtttaccagcagttctgtgcccttcagctctga
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integrated database retrieval system
