Sinocyclocheilus rhinocerous: 107750517
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Entry
107750517 CDS
T04916
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1-like isoform X1
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
srx04040
]
107750517
Ion channels [BR:
srx04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107750517
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
LSDAT_prok
Ion_trans
YVC1_C
Glutaredoxin2_C
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
107750517
NCBI-ProteinID:
XP_016421415
LinkDB
All DBs
Position
Unknown
AA seq
1649 aa
AA seq
DB search
MDNRGFGGKKGKEGSFKHASIKRTSSGSRKFQRAWIERSFLKRECIHIFPSKEPSKCCCG
QLVNQHVAILLGSTNKSAEEGQGVQTEPPQEKWSVAKHTQATPTDAYGIIEFQGGGHVNK
AMYIRVSYDTKPDNLLHLMVKDWQLELPTLLISVHGGLQNFDLQPKLKQVFGKGLIKAAV
TTGAWIFTGGVSTGVIRHVGDALKDHSSKSRGKVCAIGIAPWGIVENKEDLIGRDVTRPY
QTMSNPLSKLSVLNNSHSHFILADNGTHGKYGAEVRLRRQLEKHISLQKINTRLGHGVPL
VCLILEGGPNVISIVLESLREEPPVPVVVCDGSGRASDIISFAHKYSEEDGLVNDSVRDQ
LLVTIQKTFNYNRNQAQQIYLMVMECMKKRELITVFRTASEGQQDIEMAILTALLKGTNA
SAPDQLSLALAWNRVDIARSQIFINGQHWPPAGSLPTSSTSQQDKPKSPITTRASKRKPA
RPKKGKGAKSKPEPPEETDPRKLELLNWVNSLEQAMMDALVLDRVDFVKLLIENGVNIHH
FLTIPRLEELYNTKLGPTNTLHFVVRDVKKGNLPPDYQITLIDIGLVLEYLMGGAYRCHY
TRKSFRTLYNNLYGLKRPKALKLLGMEDDDPRPKGKKKMKKRKEEEIDIDVDDPEVSRFQ
YPFHELMVWAVLMKRQKMALFLWQRGEEAMAKALVACKLYKAMAHESSRSELVDDISQDL
DNNSKEFGQLAYELLDQSYKHDEQVAMKLLTYELKNWSNSTCLKLAVAAKHRDFIAHTCS
QMLLTDMWMGCLRVGKSNGLKVILGIIFPPTILLLDFRTGDDLSYQNSKDKEELKDKEDD
NKSGKDGTMSMDGVSKKGDEEDGKKKQKRVPVGKKIYSFYNAPFTKFWFNTTAYLVYLML
YNYIILVKMERWPSLQEWIVISYIITLGIEKVRQILMSEPGKLKQKINVWLEEYWNITDL
AAITMFLMGLLLRLQNEPYMGYGRVIYCVDIIFWYIRVLDIFGVNKYLGPYVMMIGKMMI
DMLYFVVIMLVVLMSFGVSRQAILHPDEEPTWRLVRNIFYMPYWMIYGEVFADSIDLYAM
EINPPCGENMYDEDGKKLPPCIPGAWLTPAIMACYLLVANILLVNLLIAVFNNTFFEVKS
ISNQVWKFQRYQLIMTFHDRPVLPPPLIIFSHIYIVLKRLCCRCRKKREGELDERDRGLK
LTLSLEELKSLYEFEEQCVEEYFREKEDEAQSSNDERIRITSQRVENMSMRLEEVNEREH
SMKASLQTVDLRLAQLEEFSGRMMHALERLAGIDRCELVRARSGSSMAVDQSSLLRRGSI
NSADGYSLYRWHLDAEDRGEEMSGDRKGHAERRGSIGSSDLLLNPHQGSCYGPTLDVVPL
RQRTRSSSSVDILISPCESQDRVQISQSPKLTSIQHPKDPQALLEAGIEIAVSHPLERAQ
SLRQYPTEAQSNSLSYENRSQSGTLYVSMAQSRLCSPGNMWASEPHGLQDQASRSPTLGR
WPPRFDDKVHPSPFGLSPKTSLEKLIQREAQDEEGSSKESKWTKTQQGESEEKKKDEDQS
EANSESTKTEGGEEKREELTDSDHLYVAEDRMYPSLRSKSLNTNPRKAKAVGSILAKPRA
ASSVKDLAGAFEVNTNDYRPSRERTGTQT
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atggataacaggggctttggagggaaaaagggcaaagaggggtcttttaagcatgcatct
attaaacgcacatcctctggctctcggaagtttcagagggcatggattgaaaggtcattt
ctaaaaagggagtgcattcacatattccccagcaaagagcccagcaagtgttgttgcggt
cagctggtaaaccaacatgtggctattcttcttggctccaccaataagagtgcagaggaa
ggccagggggtgcagaccgagcctccacaagagaaatggtcggttgctaagcacacacaa
gccacgcccactgacgcatacggcatcattgaattccagggaggaggtcatgtgaacaag
gccatgtatatccgtgtgtcctatgataccaagcctgataaccttctgcatctgatggtg
aaagactggcagctggagctgcccaccctgctgatctctgtacatggaggcctgcagaac
ttcgacttgcagcccaaactcaagcaagtgtttggaaagggcctgataaaagcagcagtt
accactggggcctggatcttcactgggggagttagtacaggagtgattcggcatgtggga
gatgcgctgaaagaccactcctccaaatcccgtgggaaggtatgcgccatcggaattgca
ccatggggtattgtggaaaataaagaggatctgatcggacgagacgtgacacgaccctac
caaaccatgtccaaccctctcagcaaactttctgtgcttaacaacagccattcccacttc
attctggctgacaatggcactcacggaaagtatggcgcggaggtccgactgcgcaggcag
ctggagaaacacatctctctgcaaaagatcaacacacgtctgggtcatggggtccctttg
gtgtgtctgattcttgaaggagggccgaatgtaatctccattgtgttggagagtctgcgt
gaggaacctcctgtacctgtggttgtgtgcgacggcagcggccgagcatcggatatcatt
tcattcgctcacaagtactcggaggaggatgggttggttaatgatagtgttagagaccag
cttttagtaaccatacagaagacattcaactacaaccggaatcaggcacagcagatttat
ctcatggtgatggagtgcatgaagaaaagagagctgatcacagtgttccgcacggcctca
gagggtcagcaggatattgagatggccatcttaactgccctgctgaaaggcacaaatgcc
tcagctccagaccagctgagtttagctttggcctggaaccgtgtggatattgctcgcagt
caaatcttcatcaatggacaacactggcctcctgctgggtccctgcccacctcatccacg
agccagcaggataaaccaaagagccctatcaccacccgtgccagcaagcgtaaacctgcc
aggcccaagaagggcaaaggtgccaaatccaaacctgagcctccagaggagacagatcct
agaaaactagagctgcttaactgggttaattctctggaacaggcaatgatggacgcactc
gtgcttgacagagtggattttgtgaagctccttattgaaaatggcgtcaacatccaccat
ttcctgacaatcccgcgactggaagagctctataacacaaaattagggccaaccaacaca
ttgcattttgtggtcagagatgtaaaaaagggaaacctaccgccagattaccagatcact
ctgattgacattggcttggttctggagtacctcatgggaggagcgtatcggtgtcactat
actaggaaaagtttccgcacactctataataacctctatggactgaagagacccaaagct
ttgaaactcctgggtatggaggacgatgacccaagacctaaaggcaaaaagaagatgaag
aagaggaaagaggaagaaatcgatatcgacgttgatgacccagaggtcagtcgattccag
taccccttccatgagctgatggtgtgggctgttctcatgaagcgccagaagatggcgctg
tttctctggcagaggggagaagaggccatggccaaagctctggtggcatgtaaactctat
aaagcgatggcgcacgaatcctcacggagcgaactagtggacgacatctcgcaggatctg
gacaataattccaaggaatttggtcagttagcgtatgagctgctagatcagtcttacaag
catgatgaacaggtggccatgaagcttttgacctatgagctgaagaactggagtaactcc
acctgtctgaaactggctgtagctgccaaacacagagactttatagctcacacctgcagc
caaatgctgctcaccgacatgtggatgggttgcctgcgggtgggcaagagcaatggactc
aaggtaatccttggaatcatctttcctccaaccattcttctcctagacttccgaactgga
gatgatctgtcttaccaaaactccaaagacaaagaagagctcaaagacaaagaggatgat
aacaaatctggcaaggatggcaccatgagcatggacggagtgtcaaagaaaggtgatgag
gaagatggtaaaaagaaacagaaacgagtgcctgttgggaagaagatatactctttctat
aacgctccgtttaccaagttctggttcaatacaactgcctacctggtatacctgatgctg
tataattacattatcttggtgaaaatggagcgatggccttcactgcaggaatggatcgtc
atctcctacatcatcactcttggaatagagaaagttagacagatcctgatgtcagagcca
ggaaagctgaaacagaagataaacgtatggcttgaagagtactggaacatcactgacctg
gctgccatcaccatgttcctcatgggactgttactgcgattgcagaatgagccttacatg
ggctacggacgcgtcatctactgtgtagacatcatcttctggtacattcgtgtcctcgac
atttttggagttaacaagtatttgggaccatatgtcatgatgattggtaaaatgatgatt
gacatgctgtactttgtggtgatcatgctggtggttctcatgagtttcggcgtgtcacgt
caggccatcctgcacccggacgaggagccgacatggcgtctggtgaggaatatattctac
atgccctactggatgatctatggagaagtgtttgctgactcgatagacctctatgcgatg
gagattaatccaccctgtggtgaaaacatgtatgatgaagatgggaagaagctccctcca
tgtatacctggggcctggctcacacctgccatcatggcctgttacttattggtagccaac
atcctactggttaacctgcttattgctgtattcaataacacattctttgaagtgaaatcc
atctccaaccaagtatggaagttccaacgctaccagctcatcatgacttttcacgacaga
ccggtgcttcctcctcccctcatcatcttcagccacatatacattgtgttgaagcgcctg
tgctgccgctgcaggaagaaacgggaaggggagctggatgagagagaccgtggactgaag
ttgactctgagtctggaggaactgaagagtctgtatgagtttgaggaacagtgtgtggag
gagtacttcagagagaaggaggacgaggcgcagtcttccaatgatgagcgaatccgaatt
acttcccagagagtcgagaacatgtccatgcgcctagaggaggtgaatgaacgagagcac
tccatgaaagcctccctgcagacagtagacctgcgcttggctcagctagaggagttctcc
ggccgcatgatgcacgcgctggagcggctggctggcatcgaccgctgcgaactggtccgt
gctcgatccggtagctcaatggccgtggaccaatccagcctgcttcgtcgcggcagcatc
aacagcgccgatggctacagtttgtaccgctggcacctggatgccgaggaccgcggtgag
gagatgtcaggggacaggaagggccacgcagagagacgcggcagtattggcagcagtgac
ctccttctaaaccctcatcaaggttcttgctacggacccacactggacgtggtgcccctc
cggcaaaggacacgctccagctccagtgtggacatcctcatctctccttgcgagtcacaa
gacagagtccagatctctcaatccccaaaactcacctccattcaacaccctaaagatcca
caagctctgctagaagctggaatagaaatagcagtttcacatcctctggaaagggcgcag
tccctgaggcagtacccaactgaagctcaaagtaactcactttcgtacgagaacagatcc
caaagtggtactttgtacgtctcgatggcacagtcgaggttgtgcagtccagggaatatg
tgggcttcggagccacacggcctacaggatcaagcaagcagatcgccaacgttaggtcgc
tggcctccacgcttcgatgacaaagttcatccctccccttttggactttcacccaagaca
tctttagagaaattaatacagagagaagcccaagatgaagaaggatcttctaaggagagc
aagtggacaaaaacccaacaaggggaaagtgaggagaagaagaaagacgaagatcagtca
gaggcgaatagcgaaagtaccaaaacagagggaggagaagagaaaagagaggagctgacg
gattcagatcacttgtatgttgcagaggacaggatgtacccctcactcagatctaagagt
ctgaacactaacccacgaaaggcgaaggctgtagggagcatcctggctaaacctcgagca
gccagtagtgtgaaagacctggctggggcctttgaagtgaacaccaatgactacagaccc
tctagagagaggacaggcacacagacatag
DBGET
integrated database retrieval system
