KEGG   Sinocyclocheilus rhinocerous: 107751331
Entry
107751331         CDS       T04916                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
srx  Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:srx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:srx03041]
    107751331
Spliceosome [BR:srx03041]
 Complex B
  Other components
   Complex B specific factors
    107751331
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_CDC20-Fz WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_WDR75_1st LisH_TPL NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_TEP1_C Ge1_WD40 WDR90_beta-prop_4th Beta-prop_Vps41 WD40_MABP1-WDR62_1st Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_BBS7 Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N Beta-prop_SCAP WD40_RFWD3 Beta-prop_VPS8 Beta-prop_IP5PC_F Beta-prop_WDR75_2nd DUF7165 Beta-prop_NOL10_N zf_topless VPS8_N PA14 PROPPIN LisH TolB_like LisH_PAC1
Other DBs
NCBI-GeneID: 107751331
NCBI-ProteinID: XP_016422499
UniProt: A0A673IDF5
LinkDB
Position
Unknown
AA seq 513 aa
MSIEIESADVIRLIMQYLKENSLQRTLATLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQSLKWQQHQGLLPP
GMTIDLFRGKAAVKDVEDERFPTQLARHIKFGQKSHVECSRFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMSFSRDTEMMATGAQDGKIKVWKIQSGQCLR
RYERAHSKGVTCISFSKDSSQILSASFDQTIRIHGLKSGKSLKEFRGHSSFVNDATLTPD
GHHIISASSDGTVKVWNMKTTECTSTFKSLGTSAGTDITVNNVILLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVHEKDVIGIAHHPHQNLISTYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctattgaaatagagtcagcagacgttattcgtctgatcatgcagtacctgaaggaa
aacagcttgcaacgtactttagcaacgcttcaggaggagacgacagtgtccctcaacacg
gtggacagtattgagagttttgtggcagatatcaacagcggtcactgggacactgtgctt
caggctatacagtctctcaaactccctgacaagaccctcattgatctttacgaacaggtt
gttcttgagctgattgagctccgagagctgggagctgccagatctctgttgaggcagact
gaccctatgatcatgctgaaacaaacccaacctgagcgatacatccaccttgagaacctt
ctagcacgctcttactttgaccccagagaggcctatcctgatggcagcagtaaagagaag
cgtagagcagctatagctcaggctcttgctggtgaggtcagtgtggtaccaccgtcacgt
ctgatggcactgcttggacagtctctgaagtggcagcagcatcagggtcttctgcctccc
ggtatgaccattgatttgttcagaggtaaagcagctgtaaaggatgtagaggatgagcga
ttccccactcagctggccagacacatcaagtttggtcagaagtctcatgtggagtgttca
cgcttctctcctgatggccagtatctggttactggatccgtggatggatttattgaagta
tggaactttactactggaaaaatcagaaaggatctgaagtatcaggctcaggataacttc
atgatgatggatgatgcagtgctttgcatgtctttcagtcgggacacagagatgatggcc
acaggagcccaggatggcaagattaaggtgtggaagatccagagcggtcagtgtctgcgg
cgatatgagcgtgctcacagtaaaggcgtcacctgtatcagcttcagtaaagacagcagt
cagattctctctgcatccttcgatcagaccattaggattcatggattaaaatcaggcaag
tctttaaaggagttcagaggtcattcttcatttgtgaatgatgccacacttactcccgac
ggtcatcacatcattagtgcctcatctgatggaactgtgaaggtctggaacatgaagacc
accgaatgcaccagcacattcaaatctttgggcacgtctgcgggaacagacatcactgtt
aacaatgtgatcctgcttcctaaaaaccctgagcattttgttgtgtgtaaccgatccaac
actgttgtcatcatgaacatgcagggccagattgtgaggagtttcagctctggtaagaga
gaggggggtgattttgtgtgctgtactctgtctccacgtggcgagtggatctactgtgtc
ggcgaggactttgtgctttactgtttcagcacagtcacaggcaaattagagagaaccctg
accgttcatgagaaggatgtcattggtattgctcaccacccacaccagaatttgatctcc
acatacagcgaggatgggctcctcaaactctggaagccgtaa

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