Sinocyclocheilus rhinocerous: 107751334
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Entry
107751334 CDS
T04916
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx02010
ABC transporters
srx04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107751334
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107751334
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srx02000
]
107751334
Transporters [BR:
srx02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
107751334
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
107751334
NCBI-ProteinID:
XP_016422506
LinkDB
All DBs
Position
Unknown
AA seq
2491 aa
AA seq
DB search
MPSAGTLPWIQGIVCNANNPCFRHPTPGESPGVVGNFNDSIISRLFSDAKKILLYSQNDK
SLDGFKELISAVKVMQNNTSGFKLKDFLRENETLSTFLQQNASFSHNYVQNVLEADVNLE
KVLIKGFGVHLRDMCSTTTLEDFVSIPDERVARFTQDLICSSPNSWLDQAERHFKSNLDF
LKPIRSDIRTNATDVGLVAKATDNLLESLGSLAVELASMRSWSDLRNEILFLTENATDSP
SLMYQAVSRIVCGHPEGGGLKIKSLNWYEDSNFQALFGSHNDSDDEPVSVYDNTTTPYCN
NLMKNMEASPISRMIWRALKPLLMGKILYTPHSPATQKIIHEVNKTFQELGILRDLGGMW
EEARPKVWNFMENSEEMDLMRTLLRNNATASFFSAQLAGTQWSVEDVTRFLSKHSEDTCP
HGTAFTWRDVFNEMDQAIMSISRFMECVNLDKLEPVSTEEKLVNESISLLDNRKFWAGIV
FLDMQSNSSELPPHVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFTYLQ
DVVEHSIIRAVTGTKEKTGVYIQQMPYPCYVDDIFLRIMSRSMPLFMTLAWMYSVAIIIK
GVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLISAGLLVLLLKMGNLLPYSDPGV
VFLFLGSFAVVTIMQCFLISTAFARANLAAACGGIIYFTLYLPYVLCVAWQDYVGFTAKV
IASLLSPVAFGFGCEYFALFEEQGVGIQWNNLFSSPMEEDNYNLTTCLILMYFDAFLYGV
MTWYIEAVFPGQYGIPRPWYFPFTKSYWFGERNTNNTRAVTGTKEKTGVYIQQMPYPCYV
DDIFLRIMSRSMPLFMTLAWMYSVAIIIKGVVYEKEARLKETMRIMGLDNGILWFSWFIS
SLIPLLISAGLLVLLLKMGNLLPYSDPGVVFLFLGSFAVVTIMQCFLISTAFARANLAAA
CGGIIYFTLYLPYVLCVAWQDYVGFTAKVIASLLSPVAFGFGCEYFALFEEQGVGIQWNN
LFSSPMEEDNYNLTTCLILMYFDAFLYGVMTWYIEAVFPGQYGIPRPWYFPFTKSYWFGE
RNTNNTAVHGKKGNAGAVCIEEEPTHLELGVYIKNLVKVYRHGKKLAVDGLTLGFYEGQI
TSFLGHNGAGKTTTMSILTGLFPPTSGTAYIMGKDIRSELSSIRQSLGVCPQHNVLFSML
TVEEHIWFYARLKGLSEEEVKAETEQILTDTGLPQKRKSRTSQLSGGMQRKLSVALAFVG
GSKVVILDEPTAGVDPYARRGIWDLLLKYRAGRTIILSTHHMDEADILGDRIAIISHGKL
CCVGSSLFLKTQLGTGYYLTLVKKNTEPSLSSCRNSSSTVSFVKKDDNASESSSDAGLGS
DQESEAATAIGTTWPESPVVPVDVALISSLILKHVPAARMVEDLGHEITYVLPYESAKDG
AFVELFHDMDDRLADLCISSYGVSDTTLEEIFLKVAEDSGVDTEIISDGTLPVRRHRQHS
FGADHQSCLKPLTEDENFDCNDSDGDPESKETDYLSVSNGKGSFQVKGWSLKRQQFVALL
WKRLLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLALNPWMYEEQFTFISD
DAPHDISTQKLLNALLDDPSFGTRCMEGEPIPDAPCTMGDEEWSTPEVAESVMDIFTSTN
WTMDNPSPACECSCNGKKKMLPECPAGAGGLPPPQIKISETETLQNLTGRNISDYLVKTY
AQIIGKSLKNKIWVNEFRYGGFSLGARSTQVLPPAEEIDDAISRVREIFQLGKDSGSAAD
RFLKSLSAFINGLDTKNNVKIWFNNKGWHGIGAFLNVMNNGILRASLPPGKDARQFGITT
FNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVNKAKHMQFIS
GVQPFLYWLANFLWDMCNYVVPATLVIVIFVCFQQKAYVSATNLPVLALLLLLYGWSITP
LMYPASFLFKIPSTAYVVLTSVNILIGINGSVSTFVMELFGNNEIGGINDILKNVLLIFP
HFCLGRGLIDMVKNQAMADALERFGENRFRSPLEWDMVGKNLFAMAVEGVVFFIITVLIQ
YRFFFEPKSLSAKLSPIGEEDEDVARERQRIMSGAGQGDILELRQLTKVYKRKQKPAVDR
LCVGIPPGECFGLLGVNGAGKTSTFKMLTGDCVVTKGEAFLAGKSILREIDEVHQNMGYC
PQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIRKLGLVKYVDKKAGSYSGGNMR
KLSTAISLIGAPPVVFLDEPTTGMDPKARRALWNCIHSVIKEGRSVLLTSHSMEECEALC
TRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGPDPDLQPVMKFIESELPGSTLKEK
HRNMLQYQLPSSLTSLAHIFSILAKNKEFLRIEDYTVSQTTLDQVFVNFAKDQSDDHSES
SIRRKETAINMALLSPLSIKENTEKPIESFV
NT seq
7476 nt
NT seq
+upstream
nt +downstream
nt
atgccctcagcaggcaccctgccctggatccagggcattgtctgcaatgccaacaatcca
tgcttccgacacccaacccctggggaatctccaggagtcgttgggaactttaatgattct
ataatctcacgtctgttttctgatgccaagaaaatcttactgtacagtcaaaatgacaag
agcttagacggattcaaggagcttatcagtgcagtaaaagtcatgcaaaataacacatct
ggtttcaaactgaaggacttcctgcgtgaaaatgaaaccctttccacgttcctccaacaa
aacgcctccttttcccataattatgtacagaatgtgctggaagctgatgtgaatcttgaa
aaggtgctgatcaaaggttttggcgtccatctgagagacatgtgcagcaccaccacactt
gaggattttgtgagcatcccagacgaaagggtggcgagattcacccaggacctcatctgc
agctctcccaatagctggctagaccaggccgagagacacttcaagtccaacttggatttc
ctcaaacctattaggtcagacataaggactaatgccactgatgtcggtctagttgccaaa
gccacagacaaccttctggagagcctgggatcactggctgtggagctggccagtatgagg
agctggagtgacctgcgaaacgaaatcttgtttctgacagaaaacgccaccgactcaccg
agtctgatgtaccaggctgtgtcccgaatcgtgtgtggacatccagaaggcggtggcctc
aagatcaaatccctcaactggtacgaggacagcaacttccaggcactgttcggcagccac
aacgacagtgatgacgaaccggtttcagtctatgacaacaccaccactccgtactgtaac
aacttgatgaagaacatggaagccagtcccatctctcgaatgatctggagagcattgaaa
cctctcctgatggggaagatcctctacacgccacacagccctgcaacacagaagatcatt
catgaggtcaacaagacatttcaggagctcggaattctacgagatttaggaggaatgtgg
gaagaagccagaccgaaggtttggaatttcatggagaacagtgaagaaatggatctgatg
cggacgcttcttcgaaacaatgccactgctagttttttcagtgcccagttggctgggact
cagtggagcgtggaggatgttacaagattcttgtctaagcactccgaggacacgtgtccc
catggaacggcatttacgtggcgggacgtcttcaatgagatggaccaggccattatgagc
atatcccgtttcatggagtgtgtaaacctggataaacttgaacctgtgagcacagaggag
aaactggtgaacgagtccataagtctcctggataacagaaagttttgggcaggaattgtg
tttctggacatgcagtccaacagctctgaacttcccccacacgtcaattacaagatccgc
atggacattgacaatgtggagcgcacaaacaagattaaagatgggtattgggatcctggt
cccagggctgatccgtttgaggatttgcggtatatttggggaggatttacttaccttcag
gatgtagttgaacacagcatcatcagagcagttactgggaccaaagagaagactggtgtt
tacatccaacagatgccttatccatgttacgtagatgatattttccttcgcattatgagc
cgttccatgccacttttcatgactctggcctggatgtactcagtggccatcatcatcaaa
ggtgtcgtctatgagaaggaggcccggctcaaggagaccatgaggattatgggattggac
aatggaatcctgtggttcagctggttcattagcagcctcatccctcttctcatcagcgca
ggcctgctggttcttttactcaagatgggtaatctcctgccctatagtgaccctggcgta
gtcttcctcttcctcgggtcattcgccgtggtaaccatcatgcagtgttttctgatcagt
acggcgttcgcacgtgccaacctggcagcggcttgcgggggcattatctacttcaccctc
tacctgccttatgtgctctgtgtggcttggcaagactacgtgggcttcactgccaaagtc
atcgctagcttactgtctccagtggcatttggatttggctgtgagtattttgccctgttt
gaggagcaaggtgtgggcatccaatggaataacctcttctctagccccatggaagaagac
aactacaacctcaccacctgcctcatcctcatgtactttgatgccttcctgtatggggtc
atgacctggtacattgaggcagtgttcccagggcagtatggcattcccaggccatggtac
ttccctttcacgaaatcctactggtttggagagcgcaacacaaacaatactagagcagtt
actgggaccaaagagaagactggtgtttacatccaacagatgccttatccatgttatgta
gatgatattttccttcgcattatgagccgttccatgccacttttcatgactctggcctgg
atgtactcagtggccatcatcatcaaaggtgtcgtctatgagaaggaggcccggctcaag
gagaccatgaggattatgggattggacaatggaatcctgtggttcagctggttcattagc
agcctcatccctcttctcatcagcgcaggcctgctggttcttttactcaagatgggtaat
ctcctgccctatagtgaccctggcgtagtcttcctcttcctcgggtcattcgctgtggta
accatcatgcagtgttttctgatcagtacggcgttcgcacgtgccaacctggcagcggct
tgcgggggcattatctacttcaccctctacctgccttatgtgctctgtgtggcttggcaa
gactacgtgggcttcactgccaaagtcatcgctagcttactgtctccagtggcatttgga
tttggctgtgagtattttgccctgtttgaggagcaaggtgtgggcatccaatggaataac
ctcttctctagccccatggaagaagacaactacaacctcaccacctgcctcatcctcatg
tactttgatgccttcctgtatggggtcatgacctggtacattgaggccgtgttcccaggg
cagtatggcattcccaggccatggtacttccctttcacgaaatcctactggtttggagag
cgcaacacaaacaatactgcagttcatggaaagaagggaaatgctggggctgtctgcatt
gaagaggaacccactcaccttgaattgggagtttacattaagaatcttgtgaaggtctac
cgtcatggcaaaaagctagcagtcgatgggttgacacttggcttctatgaggggcaaata
acttctttcctaggtcacaatggagctggaaaaaccaccaccatgtctatcctaactggc
cttttccctcccacctctggcactgcatatataatgggcaaagatattcgctcagagctc
agttcgatcagacagagcctcggagtgtgtccacaacacaacgtcctctttagcatgctg
acagtagaagagcacatctggttctacgcccgtctgaagggtctgtctgaggaggaagtg
aaggctgagacggagcagattctgactgataccggccttccacagaaacgcaaatccagg
accagccaactgtccggtggtatgcagaggaaactctcggtagcccttgcttttgttgga
gggtcaaaggttgttattctggacgagcccactgctggtgtggacccatacgctcgaaga
ggcatctgggaccttcttctgaagtatcgtgcaggtcggactatcattctttccacccat
catatggatgaagcggatattctgggcgatcgtattgctatcatctcccatggaaagctt
tgttgtgtgggctcttcgctctttcttaagactcaactgggaactggatactatcttacc
ttggtgaagaaaaacacggagccttctctcagttcttgcaggaactcgagcagcactgtg
tcctttgttaagaaagatgacaatgcatctgagagcagttcggatgctggtctaggtagt
gaccaagagagcgaagccgccacagcgattggaactacatggcccgaatctcctgttgtt
cctgttgatgtggccctcatctccagtctaatcctgaagcacgttcccgcggcccgcatg
gtggaagaccttggtcatgagatcacatatgtgttgccatacgagtctgccaaagatggt
gcattcgttgagctcttccatgacatggatgatcgcctcgctgacctttgcatttcaagc
tatggtgtctcagatactacacttgaagagattttccttaaagtggcagaggacagtgga
gttgacacagaaatcatctcagatggaactctgccagtgcgcagacatagacaacactca
tttggtgctgaccaccagagctgcctcaaacccctgactgaagatgaaaactttgactgc
aacgactctgatggtgatccagaatcgaaagagacagactatttgagcgtttccaatggg
aaaggatcatttcaggtgaaaggctggagtttgaagaggcaacagtttgtggctttgttg
tggaagagattgctttatgctcgccgctcaaggaaaggcttcttcgcacagattgttctt
cccgctgtgtttgtatgcatcgctctggtgttcagtcttattgtgccaccattcggaaaa
tatcccagcctggctcttaatccctggatgtatgaagaacagtttactttcatcagtgat
gatgctccacatgatataagcacacaaaaattactcaacgctttgttagatgatcctagc
tttggaacgcgatgcatggaaggagaaccaattcctgatgctccctgtacaatgggcgat
gaggaatggtctactccagaagtggcagaaagtgtgatggacattttcacatcaacaaac
tggaccatggacaacccatcgcctgcttgcgagtgcagctgtaatggtaaaaagaagatg
ctcccagaatgccctgctggtgcaggtggactgccacctcctcagattaagatcagtgag
actgagaccctccagaacctgacgggacgaaacatctcagactatctagtgaagacctac
gcacagatcattgggaaaagcttaaagaacaagatatgggtgaacgaattcagatatgga
ggattttcattgggtgctagaagcactcaggtacttcctcctgctgaggagattgatgat
gccatctctagagtcagggaaatcttccaactggggaaggactcaggatcagcggccgac
cgtttcttgaaaagcctgtctgccttcatcaatgggctggacactaagaataatgtcaag
atatggttcaataacaagggctggcacggtattggagctttcctcaatgtaatgaacaat
ggtatcttgcgtgccagcttgccgcctggcaaagacgcccgtcagtttggcatcactacg
ttcaaccatccgctcaatctgaccaaggaacagctttctcaagtggccctaatgactacc
tcagtggatgtgctggtttccatctgtgtgatcttcgccatgtcctttgtccccgccagc
ttcgttgtcttcctcattcaggagcgagtgaataaggccaagcacatgcagtttatcagt
ggagttcagccattcctctactggctggccaactttctctgggatatgtgcaattatgtc
gtccctgctactctggtgatcgtgatctttgtgtgctttcaacaaaaagcctacgtctcc
gccaccaacctgcctgttcttgcccttctactgcttctttatggatggtccatcactcct
cttatgtacccggcttcattcctcttcaaaatcccaagcaccgcttacgtggttctcact
agcgtcaacatcctcattgggatcaatggcagcgtgtccacttttgtcatggagttattt
ggaaataatgagattggtggcattaatgacatcctgaagaacgttttgctcatctttcca
catttttgcctgggtcgaggtctcatcgacatggtgaagaatcaggccatggctgacgct
ctggagagatttggtgagaaccgtttccgttctccattggagtgggacatggtgggcaag
aatctttttgctatggctgtggaaggagtggttttcttcatcatcacagtccttatccag
taccgtttcttctttgaacccaagtctttaagtgccaagttgagtccgattggagaggag
gatgaggatgtggccagagagaggcagagaatcatgagtggagctggacagggagacatt
cttgaactccgacaactcactaaggtgtacaagcggaaacagaagcccgctgttgatcgt
ctatgtgttggcattcctccaggagagtgcttcggtctgcttggtgtcaacggagccgga
aagaccagtacttttaaaatgctgaccggagactgtgtggtcaccaaaggagaagcattc
ttggctgggaaaagtatactcagagaaatagatgaagtacatcagaacatgggctactgc
cctcagtttgatgctatcaacgatctgctgacaggacgggaacacctggaattctacgcc
atcctgcgtggtgtacctgaaaaggaagtttgtgaggtggcagagtggggaatccgtaaa
ctgggcctcgtaaagtacgtggacaagaaagcaggaagctacagcggtggcaacatgcgc
aaactctccaccgccatttcactcattggagccccaccagtggtcttcctggacgagccc
accactggaatggaccccaaagcacgacgagcactgtggaactgcatccacagtgtcatc
aaagagggacgctctgtcctacttacctcacacagcatggaagaatgtgaagcgctgtgc
accaggatggccatcatggtgaacggcaggttccgctgtctgggtagcgtccaacacctg
aagaacagatttggagatgggtacaccatcattctgagggttgcagggccagatcctgac
ctgcagccggtgatgaagttcattgagagcgagctgccgggaagcaccctgaaagaaaaa
cacagaaacatgctgcaataccagctcccctcctccctcacctccctcgctcacatcttc
agcatcctcgctaagaacaaagagtttctccggatagaggactacaccgtgtcccagacc
actttggaccaggtatttgttaactttgccaaggaccaaagtgacgaccattcagagagc
tccattcgtcgtaaagagacagcgatcaacatggccctcctgagccctctgtctattaaa
gagaacacggagaagccaatagaaagctttgtgtga
DBGET
integrated database retrieval system
