Sinocyclocheilus rhinocerous: 107751343
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Entry
107751343 CDS
T04916
Name
(RefSeq) nuclear cap-binding protein subunit 1-like
KO
K12882
nuclear cap-binding protein subunit 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03013
Nucleocytoplasmic transport
srx03015
mRNA surveillance pathway
srx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107751343
09122 Translation
03013 Nucleocytoplasmic transport
107751343
03015 mRNA surveillance pathway
107751343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107751343
03041 Spliceosome [BR:
srx03041
]
107751343
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
107751343
Spliceosome [BR:
srx03041
]
Common components
Common spliceosomal components
Cap binding complex
107751343
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
AAA_11
FapA
GBP_C
Vfa1
MG280
EMC3_TMCO1
Exonuc_VII_L
tRNA_bind_2
PIN_8
DUF1690
DUF4407
PHM7_cyt
DUF1664
AAA_13
OmpH
Importin_rep_6
Barstar
Motif
Other DBs
NCBI-GeneID:
107751343
NCBI-ProteinID:
XP_016422524
LinkDB
All DBs
Position
Unknown
AA seq
758 aa
AA seq
DB search
MSRRRHSDEGDAGSQPHKRRRTSEPIEIEDRLESLICRVGEKSTSSLESNLEGLAGVLEA
DLPNYKGKILRILCAVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKETLKSN
LYSEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDIPQLPRRQKTHVSMLQVWT
AEKPHPQEEYLDCLWAQVQKLKKDRWQERHILRPYIAFDSVLCEALQHNLPPFTPPAHSD
DAVYPMPHVVFRMFDYTDAPEGPVMPGSHSVERFVIEENLRCIIKSHWRERKTCAAQLLS
YPGKNKIPLNYHIVEVIFGELFQLPSPPHIDVMYTALLIELCKLQPGSLPQVLAQATEMM
YMRLDTMNTTCIDRLINWFSHHLSNFQFRWSWDDWADCLTQDIEKPKPKFVKEVLEKCMR
LSYHQRIVDIVPQSFSALIPANPVCSYKYEEETECPLPGLAMATTVSNAIKNRASNEEIL
IVLKDVPNPNQDDDDDEGDGFNPLKIEVFLQTLLHLAAKSFSHSFSALAKFHEVLKNLTD
SDEGKLHILRVLYEFWRNHPQMTSVLVDKLIRTQIVDCAAVANWIFSPEMAHDFTRFYVW
EILHSTIRKMNKHVQKIQKELDEAKEKLEKQQNKKQRDSGDEEDMEKNSEDEEGQLEEQI
ERLQEKVESAQSEQKNLFLVIFQRFIMLLTEHLVRCETSGVDINTTWYKNCIERLQQIFL
MHYVIIQQYIGTLENLLFTAELDHHILAVYQQFCALQL
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggcgaaggcacagcgatgagggtgatgccggctcccagcctcacaaacgcagg
aggacgtctgaacccattgagattgaagaccgcctggagtcgctgatatgtcgagtggga
gagaagagtacgtcctccttagagagcaatttggagggtcttgctggtgtcctggaggcg
gatcttcctaattataaaggcaaaatcctgcgcatcttatgtgctgttgcaaggcttttg
ccggagaagttgacggtgtacacaacactagtgggacttctcaacgctcgcaactacaac
tttggaggagagtttgtggaggccatgatccgacaacttaaggagacactaaaatcaaac
ctttactctgaggccgtttacttggtgcgctttctcagtgacctggtgaactgtcatgtc
atcgcggctccatccatggttgctatgtttgagaactttgtcagtgttacgcaggaagaa
gacataccacagcttccgcggcgtcagaagactcatgtttccatgctgcaggtgtggact
gcagaaaagccccaccctcaggaagagtatctggactgtctctgggctcaggtgcagaag
ctgaagaaggaccgctggcaggagcgtcacatcctgcggccttatattgcgtttgacagt
gtgctgtgtgaagccctgcagcacaacctgccccctttcacacctccagcccactctgat
gacgctgtctaccctatgccccatgtcgtcttcagaatgttcgactacactgatgcccca
gaggggccagtgatgccaggaagtcattcagttgagcgctttgtgattgaggagaacctg
cgctgcatcatcaagtctcactggagggagaggaagacctgtgctgcccaattgctcagc
taccctggaaaaaacaagattccccttaactaccatattgtggaggtgatatttggtgag
ttattccagctgcccagtcctcctcacattgatgtcatgtacactgcgttactcattgag
ctctgcaaactgcaaccaggctcattaccacaagttctcgctcaagccacagaaatgatg
tatatgaggctggacacaatgaacacaacctgtatagaccggctcatcaactggttctcg
catcatttgagtaacttccagttcagatggagctgggatgactgggctgactgcctgact
caagacattgaaaagcccaaacccaagtttgttaaagaggttttggaaaagtgtatgagg
ttgtcgtaccatcagcggatagtggacattgttcctcagagtttctctgccctgatcccg
gctaaccctgtgtgcagctataaatatgaagaggagactgagtgtccattaccaggatta
gctatggcaactacagtgagtaacgctatcaaaaaccgggcatctaatgaggagattctt
attgttctaaaagatgtccctaatccaaaccaggatgatgatgatgatgagggcgacggc
ttcaaccctctgaagattgaagtgttcctgcagacactgctccatttggctgcaaagtct
ttcagtcattccttcagtgccctggccaagttccatgaggttctgaagaaccttacagac
agtgatgaggggaaactgcacatcctcagggttctgtatgagttctggaggaaccatcct
cagatgacctccgtgttggtggacaagttgatacggacccagatcgtggactgtgcagct
gtggccaactggatattttctcctgaaatggctcatgattttaccaggttttatgtgtgg
gagattctacattcgaccatccggaagatgaacaaacacgtgcagaagatccagaaagag
ttggatgaggcaaaagaaaagctggagaagcaacagaacaaaaagcagcgggacagcggc
gatgaagaggacatggagaagaacagtgaggatgaggagggtcagttggaggaacagatc
gagaggctgcaggagaaagtcgagtcggcccagagcgaacagaagaaccttttccttgtt
atattccagcgcttcattatgttactgacagagcacctggttcgctgtgaaacgagcggc
gtagacatcaacaccacctggtacaagaactgcatcgagaggctacagcagatcttcctc
atgcattatgtaatcatccagcagtatatcggcaccctggagaacctgctattcaccgct
gagctcgaccatcatatcctggctgtttaccagcagttctgcgctcttcagctctga
DBGET
integrated database retrieval system
