KEGG   Sinocyclocheilus rhinocerous: 107751353
Entry
107751353         CDS       T04916                                 
Name
(RefSeq) transcription elongation factor B polypeptide 1 isoform X1
  KO
K03872  elongin-C
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:srx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107751353
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:srx04121]
    107751353
   03400 DNA repair and recombination proteins [BR:srx03400]
    107751353
Ubiquitin system [BR:srx04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     107751353
   Cul5 complex
     107751353
DNA repair and recombination proteins [BR:srx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     107751353
SSDB
Motif
Pfam: Skp1_POZ
Other DBs
NCBI-GeneID: 107751353
NCBI-ProteinID: XP_016422535
UniProt: A0A673JP51
LinkDB
Position
Unknown
AA seq 112 aa
MDGEEKTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEV
NFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC
NT seq 339 nt   +upstreamnt  +downstreamnt
atggatggagaagaaaaaacctatggtggatgtgaagggccagatgccatgtatgtgaaa
ttgatctcctctgatggccatgagtttatcgtgaagagagaacatgctctgacgtctgga
acaatcaaagctatgcttagtggtcctggccagtttgctgagaatgaaacaaatgaggtc
aactttcgagagatcccatctcacgttctttctaaagtgtgcatgtactttacatataaa
gtccgctatactaatagttcaacagagatcccagaatttcctattgccccagagatagcg
ctggagcttctgatggctgcaaacttcttagattgttaa

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