Sinocyclocheilus rhinocerous: 107752006
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Entry
107752006 CDS
T04916
Name
(RefSeq) regulator of nonsense transcripts 3B-like
KO
K14328
regulator of nonsense transcripts 3
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03013
Nucleocytoplasmic transport
srx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107752006
03015 mRNA surveillance pathway
107752006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107752006
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
107752006
mRNA cycle factors
P-body specific factors
107752006
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
107752006
NCBI-ProteinID:
XP_016423328
UniProt:
A0A673KPQ9
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MSCSQSETPAGVTERQLRKVGQWRDSTHTTDKQQEIYVEHRCRSWQRIMKEDKENTRPRE
KKVEIKCDENEKPEKPNKEKKEALTKIVIRRLPPSLTKEDLVEQLQPLPELDYLEFFSSD
TSLFPHLFARAYLNFKNQDDVVLFSDRFDGYVFIDNRGQEYPAIVEFAPFQKTAKKRSKK
KDAKSGTIEDDADYKNFLEFYNGDEEKFPSNPETLLEEIEAKTKELSAKKTTPLLDFLKN
KQRIREEKKEERRRRELERKRLRDEERRKWREEDRRKRKEAEKFKKGEKASDKDKDQPKD
EQPKIKLLKKTEKADDGDTEKPKEKPKKQDREKQKEDRPPGGGDTKKRQNGEHREEKGGK
SEDSGHKNYRDRDGERDRDRERERRQKEKERIRRQDEERRKRERHDGENAYRKRDEEGKK
DKERVWEKRKNENTGESSVNAHPEKPSKDSKKEDSAKKDRLRNKDRPAIQLYQPGARSRN
RGGGGTGGDGQAAEKRAERESKSTQEKAAE
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgagctgtagccaatcagagacgcctgctggtgttacggagagacaactgcggaaagtt
gggcagtggagagatagcacacatacgactgataaacagcaagaaatatacgtagaacat
cgctgcagaagttggcaaaggatcatgaaggaggacaaggaaaacacgcgtcccagagaa
aagaaagtggaaataaaatgtgatgaaaatgaaaagccagagaagccaaataaagagaag
aaggaggctttgacaaagattgtgatccgacgtctccctccaagtctaactaaagaagat
ttagtggaacaactgcagcctcttccagagctggattacctggagtttttctctagtgat
actagtcttttccctcatctgtttgcaagagcgtatctgaatttcaaaaatcaagatgac
gtagttctcttcagtgaccggtttgatggctatgtcttcattgataatcgaggtcaagaa
tatccagcaattgttgagtttgcaccattccagaaaactgctaagaaaaggagcaagaag
aaggatgccaaaagtggaacaattgaagatgatgctgattacaaaaattttttggagttc
tacaatggtgatgaggaaaaattcccttccaaccctgagacattacttgaggaaatcgag
gccaagacaaaggaacttagtgctaaaaaaacgacaccactcttggacttccttaaaaat
aaacagaggattagagaagaaaagaaagaagagaggagacggagagaactagaacgtaaa
cgcctgcgagatgaagaaaggcgtaagtggagagaggaggacagaagaaaaagaaaagag
gctgagaaatttaaaaaaggagaaaaggcatctgataaggataaggaccaacctaaagat
gaacagccaaaaattaagctcttgaaaaaaacagagaaagcagatgatggtgatactgag
aagccaaaggaaaagcccaagaaacaagaccgagagaaacagaaggaagatcgacctcct
ggaggaggagacacaaagaagcggcagaatggtgaacacagagaggagaaagggggaaag
tcagaggatagtgggcataaaaattacagagatcgtgatggagagcgagaccgggacaga
gagagagagcgaagacagaaagaaaaagaacgtatcagaaggcaggatgaagaacggagg
aaaagggaacgtcatgatggagaaaacgcctacagaaagagagatgaggaggggaagaag
gacaaggagcgtgtttgggagaaaagaaagaatgaaaacactggagagtcctccgttaat
gctcaccctgaaaagccatcaaaggacagcaaaaaagaagacagtgccaaaaaagaccgt
ctgagaaataaggatcggcctgcaattcagctgtaccagcctggggcgaggagccgtaac
cggggtggaggaggaacaggaggagatggacaggcagcggagaagagggctgagcgggag
tccaagagcactcaagagaaagctgctgagtga
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