KEGG   Sinocyclocheilus rhinocerous: 107753054
Entry
107753054         CDS       T04916                                 
Name
(RefSeq) WD repeat-containing protein 48-like isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:srx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    107753054
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:srx03400]
    107753054
DNA repair and recombination proteins [BR:srx03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     107753054
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_DCAF12 ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_Vps41 WD_LRWD1 Beta-prop_IP5PC_F WD40_RFWD3 Beta-prop_HPS5 WDR54 Beta-prop_NUP159_NUP214 RAWUL Nucleoporin_N WD40_like Tfb2_C
Other DBs
NCBI-GeneID: 107753054
NCBI-ProteinID: XP_016424647
LinkDB
Position
Unknown
AA seq 680 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVK
ALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMGT
VIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLGQ
QRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRSPDIRVLICEEKAPVLKME
LDRSADPHSAIWVSTAKSTVNKWSLKGIHNFRASGDYDNDCSAPLTPLCTQTEQLIKGGA
SIIQCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKMEFDEENKKRFKMVYVPNWFS
VDLKTGMLTITLDESDCFAAWVSAKDAGFTSPDGSDPKLNLGGLLLQALLEYWPRTHTNP
TDEETELNHGSVNGEHESRIQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESM
LLNETVPQWVIDITVDYLTEKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKV
MEHVYEKIINLDSESQTGGSAAEKPSEQKEEEDMAVLAEEKIELLCQDQVLDPNMDLRTV
KHFIWKSGGDLTLHYRQKST
NT seq 2043 nt   +upstreamnt  +downstreamnt
atggcgacgcatcacaggcagaatgcagcggggcgcaggaaagtgcaggtgtcatacgtg
atcagagacgaggtggagaaatataatcgtaatggagtcaacgcacttcagctggatccg
gctctgaaccggctcttcaccgccgggagagactccatcatcaggatatggagcgttaac
cagcacaaggatccgtacattgcatcgatggagcatcacacagactgggtcaatgacatc
gtcctctgctgcaacgggaaaacactgatatcagcgtcgtcagacaccacggtgaaggtc
tggaacgcacacaagggcttctgcatgtccacactgcgaacgcacaaggactatgttaaa
gcattggcatatgctaaagacaaagagctggtggcttctgcaggactggacagacagatc
tttctctgggatgtgaacacactgaccgcactgaccgcgtccaataacaccgttactacg
tcttctctcagtgggaacaaggactccatctacagtctggccatgaatcagatggggacg
gttatagtgtcaggatccactgaaaaggttctgagagtgtgggacccgcgaacctgtgcc
aaactgatgaaactgaaaggacacacagataacgtcaaatccctgctgctcaacagagac
gggactcagtgtctctcagggagctcagacgggacgatccggctctggtctctgggtcag
cagaggtgtatcgccacgtaccgcgttcacgacgagggcgtctgggcgctgcaggtcaac
gaggccttcacgcacgtttactccggaggccgcgaccggaagatatactgcacagacctg
cgcagtcctgacatccgtgtgctgatctgcgaggagaaggctcctgtgctgaagatggag
ctggaccgctcggctgatccgcattcggccatctgggtttccaccgcgaagtccacggtt
aataagtggtctctgaagggtatccataatttccgagcgtctggtgattatgacaatgac
tgcagcgctccgctgacgccgctgtgcacgcagacagagcagctgatcaaaggtggcgcc
agtataattcagtgccacattctgaacgacaaacgacacattctgaccaaagacaccaac
aataacgtggcgtactgggatgtgctgaaggcctgtaaagtcgaagacttgggcaagatg
gagtttgacgaagagaacaagaaaaggttcaagatggtttatgtgccgaactggttttcg
gtggatctgaagacagggatgttgacgataacgctggacgagagcgactgctttgcagcc
tgggtttctgctaaagacgctggattcaccagccctgacggatccgaccctaaactgaat
ctgggcgggctgctgctgcaggctctgctggagtactggcctcgcactcacaccaacccc
acggacgaggagaccgaactcaatcatgggagcgtgaacggtgagcacgagagccggata
cagaagggaaacggatatttccaggtgccgccgcacactccggtgattttcggtgaagcg
ggaggaaggacgttattcaggctgctgtgtcgagactccggtggagaaactgagtccatg
ttactcaacgagacggtcccgcagtgggtcatcgacatcacagtggactatctcacagaa
aaaaacatgcccaaattcaacaaaatcccgttctacctccagccccattcgtcctctgga
gcaaagacgttaaagaaggatcgtttgtcggccagtgatatgttacaggtgaggaaggtg
atggaacacgtgtatgaaaagatcatcaacctggacagcgagtcgcagacaggcggttcg
gccgcagagaaacccagcgaacagaaagaggaggaggacatggcagtgctagcggaggag
aagattgagctgctctgccaagaccaggttctggatcccaacatggacctgcgaacggtg
aagcacttcatctggaagagcggcggcgacctgacgctccactaccggcagaaatccacg
tga

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