Sinocyclocheilus rhinocerous: 107753661
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Entry
107753661 CDS
T04916
Name
(RefSeq) LOW QUALITY PROTEIN: rootletin-like
KO
K16469
rootletin
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
srx03037
]
107753661
Cilium and associated proteins [BR:
srx03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
107753661
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
ATG16
ERM_helical
Motif
Other DBs
NCBI-GeneID:
107753661
NCBI-ProteinID:
XP_016425355
LinkDB
All DBs
Position
Unknown
AA seq
1956 aa
AA seq
DB search
MSCEGDQGLEAVIQKLEETLLNPDSGGEEKIFTLWGDEEESNITTVPARIREIITRNLAD
TPTGESSEVEENRLPKDLPSQMCADRDQLLSRQAALTSRLEQMLLQQSGDSDQQSVYGTE
QGWLREEGRSYRLKLQAFQESQHRQAQLVQKLQAKLLQYKKRCGNLEQQVLEKTSESENL
RLSLQSHLDSSAHRLQRFEQEHSMDVQSKLALLEDEQKRCSGLSQVNALLREQLEQANEA
NRALTESLQKAREEAEQRDTRLRRELEMNTSRNGHEQARVRSLWRQAAFLRSSFTQLRAF
ADRSLSDMRTECVVAGRRLQTACVNLEASMSQPCTPASSGVSALESQLRDKLKEAMQLQA
RFDAEKVELSSRILELGEMVKQLRAQNIEKASNLTALRSSLDRMEINRSEDRTEKDALRS
EISSLQQLLHNINQVVSGEISSDLSKDEHPSVSAGSISSSQRDGIVIAVQRALLQQQTQI
QELQARLEAFQEQVATLQDQLHVGEDETRSLEQRIRELQQENQLLERSEEDNTRDAQRYR
NSLGIVNSEKGELERQLSALQQQLECTQAEQEALRSSSLDVQRQRDLLRQQREDLERQLA
RERSESERGRHTLEQLEMRHSDVRKELVTLKEALSQLNLQKEVLEDEKSSLAQALSRAEA
QNAEQELALTKLQSEDAGLQDSLAKMGALSEGLAKDKVELNRLLLQVEAEKAELGERKRD
TELERAAAREELAQLQQELLDLTAEKRALEASHIHLQESRVTQDAENNVLQREKSSALEQ
HAQVSKQKQALKEQLNTCRREMELSAASLKKTCKERDELARDKANLTVQLTSEQRKSKAL
AQDLAALRAERESLESGLLDRQELASMLEADRARLEGENASLQQANETMTSELSNVHSEL
EQQMSRALQEKQALELKLAQVERNAQQTLITTQQSHQEQLHTERKHKERMRAELCSQREQ
AESQLRAECEELRMQSRRVQQQLQEELAKLQQHCTESLLQAESHKQQVLSEKEAEKAPLT
ERIITLERDIETAALEKDRMRRDFLRKQEQDKDTVLGLQAELQDLRSHFEESLSSREVSE
RSLNDQIRELSLQRQESQQEVERLRRELSEVEESRDSGRKELIEAHRELRECLQDRDAQR
REGMELKRALGDVVREKEAIQASNHELRTAVKRAEFENNSLKRVGEEKDQRLAVLEECKS
SLQQEVLKLRTNMRELEKSRLQARRELQELRRQVKTLEGQCTQQGQELSDMQIRLTQEEH
REEEMRKETFTLRQRVLESDAGREAALKEAAGLQRRVAELEEVQRQEKELQQQQDANLQE
SQVKQREEVARLEGALQEAQAQLRELGLKVSLAEARAQGLEEQLGQNDAIRRDLEHRLNV
LSSTLRRTLGSRRGRRSPAPGECRRSPSPWRTRSPVKGEPMSDEPGISGLLVCSVSPSRG
EDGELDLDSVHMLLRNFQQELRDTQRERDEAQAQVHSLSKQVESLQASQERGNTRIQMLK
QSIRELEEGKHELAKHLEGTQASLALRDEAFQHGELQNRIMSEELARMKNSQQITEAEAK
ALKEKLERSQASEESLEAERRRMKETCEAAEARAARLELARRGLEGELQRAHLRATETES
EVSSLQERLNNLHRELGDSEERAALLKVEGERLATALAHTELQESQLREQLQSMAASLTE
SNAATGAAEEQAAQLQRALTASEHDRKMLQERLDKTREALTNSRKQNHGLSERXLQRSQE
ESELRVSELDKQTRGLQEAVRQRQQAKQEVQESYALLHGEKDQLQEQVATLQTTAHRLQG
EKAELERTLLRLEKDRSSLKRILEKVEKNRQRKEAEVLHAEREREQQEQKIRNLEQDLSE
TQAEIHMLQSQISILEQTHSQRLLEVTARHRQELDLETERMRDSQQQAERALEAREKAHH
QRVHCLEEQVCTLKEQLEQEMKRRQAYMKQMLRLGL
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atgagttgtgaaggggatcaaggactggaagccgtgattcagaagctggaggagacgctg
cttaacccagatagcggtggagaggagaagattttcactctgtggggagatgaggaggag
tccaacattacaacagttcctgcccgcatccgtgagatcatcaccagaaacctggctgat
acgcccacaggcgagagcagcgaggtggaggagaaccggctgccgaaggatctgccttct
cagatgtgcgcagacagagaccagctgcttagcaggcaggctgctctcactagccggctg
gagcagatgctgttgcagcagtcaggagattcagaccagcagagtgtgtatggcacagag
cagggttggctaagagaggaaggacgatcttataggctgaagctccaggcctttcaagag
agccaacacagacaggctcagctggtgcagaaactacaggcaaagttgctccagtataag
aagagatgtggaaatctagagcagcaggtgttggagaaaacctcagagtcagagaatctg
aggctctcgctccagtcacacctagactcttcagcacaccggctccagcgctttgagcag
gaacacagtatggatgtccaaagtaaacttgcactgctagaggatgagcagaaacggtgt
tctggtttgagccaggtcaatgcgctactccgggaacaactcgaacaagccaacgaagcc
aatcgggccctgacggaaagcctgcagaaggcacgagaggaggcagagcagagggacacg
cgactcaggagggaacttgagatgaatacctcccgaaacggccacgagcaagcccgtgtg
cgatctctgtggcgccaggccgccttcctgcgaagctctttcacccagctgcgggccttt
gctgacaggagtctatccgacatgcgaaccgagtgtgtggtggctggccgacgtcttcaa
acggcctgtgtgaatttggaggctagcatgagccagccttgtacccctgctagcagcgga
gtatctgcactggagagtcaactaagagataagctgaaagaggctatgcagctgcaggcc
cgctttgacgcagagaaagtagagcttagctctaggatcctggaattgggtgaaatggtg
aaacagctcagagcacagaacattgagaaggcaagcaatctgacagcactgcggagcagc
ttggacaggatggaaataaatcggtccgaagaccgaaccgagaaggatgccttacgcagc
gagatcagcagtctgcaacagttactgcacaacattaatcaggtggttagtggagagatt
tcctcagatttatcaaaagatgagcacccatctgtttctgcaggatctatttcctcttct
caacgagacggtattgtgatagctgtgcagagagccctcttacagcagcagacacaaatt
caggagctgcaggcacgtctggaagctttccaagagcaggttgccaccttgcaagatcag
ctgcatgtgggggaagatgaaaccagaagcctggaacaaagaatccgggaactgcagcaa
gagaatcaacttctggagagatctgaggaggacaacactagagatgcccaaagataccgc
aactcgctgggcatagtaaacagtgaaaaaggagagcttgagaggcagctctcggccctg
cagcagcagctggaatgcacacaagcagagcaggaagctttgagaagctcatctctggat
gttcagaggcagagagacctcctcaggcagcagagggaggacctggagaggcagttggct
cgagaacgctctgaatccgagaggggacgacacactctggagcagctggagatgagacac
tcggatgtgcgtaaagagctggtcacactaaaagaagctctgagtcagctgaatttacag
aaagaggttttggaggatgaaaagagcagtcttgcacaggctctctctagggcggaggcc
cagaatgctgagcaggaactggcgctcactaaactacaaagtgaagatgcagggctacag
gactccctggctaagatgggagccctgagtgagggattggctaaagataaggtcgaattg
aaccgtcttctcttacaggtcgaggctgaaaaggcagagcttggcgaacgcaaacgggac
acagagctagagcgagcggcagccagagaagagctagctcaacttcagcaggagctgtta
gaccttacggcagagaagcgtgctctggaggcctcacacattcaccttcaagagagccga
gtgacccaggatgcagagaacaacgtcctacagagggagaaaagttcagccctggagcaa
cacgcccaggtcagtaagcagaagcaagccctgaaggaacagttgaacacatgtcgtaga
gaaatggagctgagtgctgcctcgctaaagaagacttgcaaagagagagatgaactggca
agagacaaagccaatctcacagtgcagctcacctcagagcaacgtaaatccaaggccctg
gcccaagacctggccgctctgcgggctgagagagagtctctagagtcaggcctgttggac
aggcaggaactggcctcgatgctagaggctgaccgggctaggctagagggagagaatgct
agtctacagcaggctaacgagactatgacgagtgagctgtctaatgttcacagtgaacta
gagcagcaaatgtcccgggctttgcaggagaaacaggctttagagttgaagcttgctcag
gtcgagagaaacgcacaacaaaccctcattacaacacagcaaagccatcaggaacaactg
catactgagcgaaagcacaaggagcgcatgcgtgcggagttgtgttcacagagggagcag
gcagagtcgcagctgcgggctgagtgcgaggagctgcgcatgcagagtcgcagagttcag
caacagctgcaggaagaactggccaagctgcagcagcactgtacagaatccctgctgcag
gccgaaagccataaacagcaggttctatctgagaaggaggcagagaaggctcctcttact
gagcgcataattaccctcgagcgtgacatagagacagctgcccttgaaaaggatcgtatg
cgtagagacttcctgagaaaacaggagcaggacaaggacacagttttagggttgcaggca
gagcttcaagacctacggtctcatttcgaggagtctctgagttcccgtgaagtttcggag
cgcagcttaaatgaccagatcagagagctttctctgcagaggcaggagtctcagcaagag
gtggagcgtttgagaagggaactgagtgaggtggaggagagcagggactctggccgtaag
gaactgatcgaggcccaccgagagctgagggagtgtttgcaggacagggatgcccagcgg
cgtgagggcatggaactgaagagagctttaggagatgttgtgagagagaaagaggccatc
caggcttccaatcatgaactccgaacagctgtgaagagagccgagtttgaaaacaacagt
ttgaagcgagtgggagaagaaaaggaccagaggctggcagtgttagaagaatgtaaatcc
tccctccagcaggaggtgctgaagctgagaaccaatatgcgtgaacttgagaaatctcgc
ttgcaggcacgcagggaactgcaggaactgcgcagacaggtgaagacattagagggtcag
tgcactcaacaagggcaagagttgagtgacatgcagatcagactgacccaggaagagcat
agagaggaggaaatgagaaaggagacctttactctcagacaaagagtactggaaagtgat
gctggcagagaggcagctctgaaggaggctgcaggcttgcagcggcgtgtagcagaactg
gaagaagtgcagcgccaggagaaagagttgcagcaacaacaggatgccaatcttcaggag
agccaagtgaagcagcgtgaggaggttgctcgcttggagggggcactgcaggaagcccag
gcccagctcagggagcttgggctgaaggtgagtctagcagaggcccgggcccaagggctg
gaagagcagctgggacagaatgacgccatacggagagatcttgagcacaggttgaatgtt
ctcagttctaccctgagacgtacacttggaagcagacgtggaagacgttcgcccgcaccc
ggggaatgcagacggagtccctcaccatggagaactcgatcacctgtgaaaggtgaaccc
atgtcagatgagcctgggataagtggattgctggtgtgttctgtgtccccctcccgcgga
gaagatggagaattggatttggactcagttcacatgttgctacgtaacttccagcaagag
ctcagggacacacagagagagcgggatgaggcccaagcacaggtgcacagtctcagcaag
caggtagaaagcctgcaagccagtcaggaaagaggcaacacacgtatacagatgctgaaa
caatctatcagagagctggaggagggaaagcatgagctggctaagcatttagaggggaca
caagcatcactcgccttacgggatgaggcgtttcagcatggggaattacagaataggatt
atgagtgaagagttggccagaatgaagaacagccaacagataactgaggcagaagccaaa
gcactgaaggagaagctggagcgctcccaggcctctgaggaaagtctggaggctgagcgc
cgccgtatgaaggagacctgtgaggccgcggaagctcgagctgccaggctggaactcgca
cgccgggggttggagggagagctgcagcgtgcccacctccgagcaacagagaccgagtcg
gaggtcagctcactgcaggaacgcctcaacaacctccacagagaactgggagacagtgaa
gagcgtgctgccctcctgaaggttgagggtgagaggttggcaactgccttggcgcacaca
gaactgcaggagagccagttaagggagcaactgcagtccatggctgcatccttgactgag
agcaatgctgctacaggagcagcagaggaacaggctgcgcagctgcagcgagctctcaca
gccagtgaacatgaccggaagatgctgcaggaaaggttggataagacacgggaggctctg
acaaacagtaggaagcaaaatcatggcttgagtgagaganncctgcagagaagccaggaa
gagtctgaactcagggtctctgaactggacaaacagacacgaggcctgcaggaggctgtg
agacagaggcaacaggctaagcaggaggtgcaagagagctatgcactcttgcacggagaa
aaggatcagcttcaggagcaggtggctaccctgcagaccactgcacatcggctgcaggga
gagaaagctgagctggagaggacactgctccgtctggaaaaagacaggtcctctctaaag
cgtatcctggagaaggtagaaaaaaatcgccaaaggaaggaggcagaggtattgcatgct
gagcgtgagagagaacagcaagaacaaaagatcagaaatctagagcaagatttaagcgag
acacaggccgaaattcacatgctacagtcacagatctctatcttggagcagactcactcc
cagaggctcctggaagtgacggctcgccacaggcaagagctggacctggagaccgagcgg
atgagggactcccagcagcaggcagagagagcactggaggctcgagagaaagctcaccac
cagagggtccactgcttggaggaacaggtttgcacactgaaagaacagttggagcaggag
atgaagaggaggcaagcgtatatgaagcagatgctgagattggggctctaa
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integrated database retrieval system