Sinocyclocheilus rhinocerous: 107754143
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Entry
107754143 CDS
T04916
Name
(RefSeq) LIM and calponin homology domains-containing protein 1-like isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
srx04990
]
107754143
Domain-containing proteins not elsewhere classified [BR:
srx04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
107754143
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
107754143
NCBI-ProteinID:
XP_016425959
LinkDB
All DBs
Position
Unknown
AA seq
1840 aa
AA seq
DB search
MASPGDDSASNAHLDQAESADATPEPAFQEAQKWIEAVTGRSFGDKDFRSGLENGILLCE
LLSSIKPGLVKKINRLPTPIAGLDNLTMFLRGCEELGLKGSQLFDPGDLQDTSIRANLTG
SDCSRKLKNVLITIYWLGKAANSCATYNGPTLDLKEFEGLLSMMRKECVNEDLDSPKRSI
RDSGYIDSWESERSDSLSPPRHGRDDSFDSLDSFGSRSQNTPSPDTVIRCNSDDSEGEAG
HRKLPDVRKDDMSARRVSCKEPRAALPFNQYLPNKSNQTNYLPAPLRKRRSDREEDRRSP
SNSTSPVGGERPLRQECLEVLKEGAVVSRSLAFQKNSTWVNEKRAELEEAELKKMRKLEK
AGIKVLPSSVRYISPIVNSVEASEAKPPSPDIILRRDNEFMRVAAPQQWDSNEEDDDEEA
ERKVPDVQKDDLASRRARMNQFKPSVAHHFLPGTCSWKDQEKWEGIRLASQHAVLERMEK
IEQEKRSQADSASPEVPIIIRKDNPFLNPEKDRGKEGNEEDEREEEGKIVVPNPLKDDLA
RRRTGRGPHPPKDPHQSLVQTSITQSDLETWQRLKMNTDSSESDSTPAEVSIITRKDNPF
LTPEKDSESEQEKEKEKEEGTDREKGARVVMPNVKTDDLARRRGQSGPVPQRDPRQSLAQ
TTITQSDLEKWQRLKMNTESSDDPIVPLCQTCLEKGCLSVSSKMKVAKNDLASCQERSSG
ERRRFVTFGGVTEMENTSWKEEEEEGGEGQGDEAEKLRYLLSMAPVAVPTIGLGFILTKR
AVGSGDAKPEPPPIMPPEPPNPVMFDLKRPLTSTERKVLEEELAEKAKDEREDDEEDEEE
ERQPDIEKDDMLARRTGAFQKPASGTSYNRFLPQSGSKREGATAASLAQKGTSGERDLQY
LERSIKTKRTKIGQRNEPVSQVTKTPVPVAVVTEKSPDIVRSSATNANRSGSYDECGDDD
QLPDFEKDDMIARRTGSYQKPSAGQAFNAFLPKPVAVKHKITPVTGSQSYLKPREQETAP
SLDSFTLSSVAQPPRNAEDTPRKCPQMMDRQEADSVGVVGHESLIKDETITKSPSPKPHQ
PSRRPLWQEDDDLPPIFRATSVSDTESMSLIDMRDEEDEMAYLRPHSQSRHEEDQWQDDL
ARWKNRRRSASQDLIKKEEERKMMEKLMTADGESGHRRKSIKTYKEIVEEKERREQELHE
QYCKASTPEEKAAVLQRYALRFTISDAILEKLQLPKLPSAAPPMHTSPLHQPEKKLTCTT
LVEAEVPEPEQTTQTHHSVYIDQKTTQKQAPAQAKTPEPSPSETTKAPEVLSAPTRVPPA
PSKPVPLITPKPYSQPKFSQGLRKSVKSDGLIRVNCDSTQQESRERDDRDSMSCPQINFS
SSPPKPDILSQQNEELIVLEASEHQQNLQTSISDKKNEVIKEEKKCSLSPQEENSKEDTS
TTLSVSEPEGKQPVPDTMMKRSCVVTTTIVTELTQTHPVPPTDASSTEQLDSVHSSCDVS
STAESSKTEQTSYSLSMTEGIDYSIDCIETPMLNLAKRVDHWTWDPNEERRRQEMWQQEQ
ERLLQEKYQREQEKLKEEWERAQREVEEDERRHHEEERRILEETVTPLTPRTSGLSYCMV
TEAPPLTQPSAPHDTIVLSLADWEKKQEMLEKQAQTNQSNRLTHSPDQVITPAQQNGQRT
EPQESQTATPQLQFIQDGSWSCKSKDRQEDLKKTASLDRKPSPPQSQTTRMRRTGSCENV
LGTHPSKSPTPSQDTPPPSPSRSVSGKKLCSSCAHPLGKGAAMIIESLGLYFHIQCFKCG
ICKGLLGDTSAGTDVRIRNGLLNCQECYIKSRAAGQPTTL
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcctggagacgattcggcttcaaatgcccatctggatcaagctgaatctgct
gacgctactccagaaccagcgtttcaagaggctcaaaaatggatcgaggcagtgacagga
agaagtttcggtgacaaggattttagaagcgggctggagaacggcattctgctctgcgag
ttgctgagttcaatcaaaccaggccttgtgaaaaagatcaatagacttccaacacccatt
gcagggctggataatctgaccatgtttctgagaggatgcgaagagctgggattgaaggga
tcacagttgttcgatcccggagacctgcaggatacgtcgatacgagcaaacttaacgggc
tctgactgcagtagaaagctgaagaatgtgctcataaccatatactggcttggtaaagct
gctaacagctgtgcaacatataacggccccacactcgacctgaaagagtttgaggggctt
ctttccatgatgcgaaaggagtgtgtaaatgaagatttagactcccctaagcgcagtata
agggacagcggttacattgacagctgggaatcagagcgctctgattcgctgtctcctccg
aggcatggccgtgatgattcgtttgacagtctcgactcatttggctcacgatcacagaac
acaccctccccagacacagttattcgctgcaacagtgatgactccgaaggtgaagctgga
catagaaagttgccagacgtgcgtaaggatgacatgtctgcccgccgcgtgtcctgcaaa
gagcctcgcgcagctctaccctttaatcagtatctgccaaacaagagcaaccagaccaac
taccttcctgctcccctgaggaagaggaggagcgacagagaggaagacaggaggagtccg
agcaactcaacatctcctgtaggaggagaaagacctctcagacaagaatgcttagaagtg
ttaaaagagggggctgtcgtgtctcgaagccttgcgttccagaaaaattccacctgggtg
aatgagaaaagggcggagcttgaggaggcggagcttaagaaaatgagaaagctggaaaag
gcgggaataaaagtattaccttcctctgtgcgatatatcagtccaattgtgaactctgtg
gaggccagtgaagctaaaccaccttcacctgacatcattctccgtcgtgacaatgagttc
atgcgcgtcgctgctccacaacagtgggattcgaatgaggaagatgatgacgaagaggca
gaacggaaggttccagatgtccaaaaggatgatcttgcttctcgcagagcacgaatgaat
cagtttaagcccagcgtggcacatcacttcctgccaggcacttgtagctggaaggaccaa
gaaaaatgggagggaatcagactggcatcccagcatgccgtgttggagaggatggagaag
atagaacaggagaaaagaagtcaggctgactccgcctcccctgaggtgccaatcataatt
cgtaaggacaatcctttcttgaatcctgaaaaagacaggggaaaagaggggaatgaggaa
gatgagagagaggaagaggggaagatagttgttccaaacccactcaaagatgatctagcc
aggaggcggactgggagagggccacaccctcccaaagatcctcatcagtcattggtccag
acttccatcactcagtcagacctggagacatggcagaggctcaagatgaatacagatagc
agtgagtctgactccactcctgctgaagtgtcaatcataactcgcaaggacaaccccttc
ctgacccctgagaaagacagtgagagtgagcaggagaaggagaaggagaaggaggaggga
acagacagagagaaaggggcgagggtggtgatgcctaatgtaaagacagatgacctggcc
agaaggcggggccaaagtgggcctgtcccacagagggacccccggcagtcattggctcaa
acaaccatcactcagtcagacctggagaaatggcaaaggctcaagatgaatacagagagc
agcgatgaccctattgtccctctgtgtcagacgtgtcttgagaaaggctgcctctctgtt
tcctccaagatgaaggttgccaagaacgacctggccagttgccaagaacgttcctccggt
gaacggcggcgttttgtgacatttgggggtgtgacagagatggagaatacgtcctggaaa
gaggaggaggaggaagggggagagggacagggggacgaggcagagaagcttcgatatctc
ctctcgatggcacctgttgcggtgcccaccatagggctgggcttcatactgacaaagaga
gcggtgggcagtggagatgcaaagcctgagcctcctcccatcatgccccctgaacctccg
aaccctgttatgtttgaccttaaaaggcctttgacctccaccgagcgcaaagtgctggag
gaggaactggctgagaaagcaaaggatgagagggaggatgatgaagaggatgaagaagaa
gagaggcaaccagatatagaaaaggatgacatgctagctcgtagaacaggagcatttcag
aagccagcaagcgggacttcatataacagattcctcccgcagtcaggttccaagagagag
ggagctacagcagcttccttagcccagaaaggaacgagtggagaaagagatctccaatac
cttgaaagaagcataaagacaaagagaaccaagattggacagagaaatgaaccagtcagc
caagtaacaaagacacctgttccagttgctgtagtcacagaaaagagccccgacattgta
cgttcttctgcaactaacgccaatcgctctggcagttacgatgaatgtggggatgacgat
caactgccagattttgagaaggatgacatgattgcacgaaggaccggatcttaccaaaag
ccaagtgcaggacaggcttttaatgcttttctgcccaaacctgttgctgtcaaacataaa
atcactcctgtcactggatcgcagtcatacctcaagccaagagagcaagagacagccccg
tctctggacagcttcacccttagctctgtggcccagcccccaagaaatgctgaggacacg
cctaggaagtgccctcagatgatggacaggcaagaggcggactctgtgggtgtggtggga
catgaaagtcttattaaagatgagactattaccaaaagcccctcccccaaacctcaccaa
ccctcacgtcgccccctttggcaggaagatgatgatctccccccaatattcagagctact
agtgtttctgacacagagagtatgagtttgattgacatgcgtgatgaagaggatgagatg
gcctaccttcggccacacagccaatcacgacatgaggaggaccagtggcaggacgacttg
gctcgctggaagaatcgaaggcgaagtgcatctcaagatttgatcaaaaaggaagaagag
aggaagatgatggagaagctaatgacagcggatggagaatctggccatcgcaggaagagc
atcaagacatacaaagaaatcgtagaggagaaagagcgtagggaacaggagctacatgaa
caatactgtaaggcctccaccccagaagagaaagcagctgtgcttcaacgctatgctctc
cgtttcaccatcagcgatgccatattggagaaactccagctccccaaactgccttctgct
gctccaccaatgcacacgtcacctcttcatcaacccgagaagaagctgacatgcaccacc
ttagtagaagcagaggtcccagagcctgaacaaactacccaaacacaccacagtgtctat
atagaccagaagactacacaaaaacaggcaccggcacaggccaaaacccctgaaccatca
ccttctgagaccaccaaagctccagaagtcctgtcagcacccacacgagttcctccggct
ccgtcgaagcctgtacccctgatcaccccaaaaccctacagccagcccaaattcagccaa
ggcctccgcaaatcagtcaagagtgatgggctgattcgtgtgaactgtgacagcactcag
caggagagcagagagagggatgatagagattctatgtcgtgtcctcaaatcaacttctct
tcctcacctccaaagccagatattctaagtcaacaaaatgaggagctcattgttttagaa
gcctcagaacaccagcaaaacttacagacttccatttctgacaagaagaatgaagtcata
aaggaggaaaaaaagtgttctcttagtcctcaggaagagaatagcaaagaagacacctca
actacactgtcggtgtcagaaccagaaggaaagcagccagtgcctgacacgatgatgaag
cgcagctgtgttgtcacaacaaccatagtgacagaactcactcagacacaccccgtccca
ccaactgatgcatccagcaccgagcagctcgattcagtccatagctcatgtgatgtgagt
tcaactgccgagtcaagcaagactgagcagacttcatactcgctctcaatgacagagggg
attgactactccattgattgtattgaaaccccaatgttgaaccttgcaaaaagggttgat
cactggacatgggatcctaatgaagagcgtagacgacaggagatgtggcagcaggagcag
gaacgcctgctgcaggagaaatatcagcgagagcaagagaagctgaaggaggagtgggag
agagcacagagagaagtggaagaggatgagaggagacaccatgaagaggaaaggcggata
ctggaggaaaccgtgaccccactgacccctcgcacctcaggtttatcatactgtatggtg
acagaggctccgcccctcacccagccctcagccccacatgacaccattgtcctctccttg
gctgactgggaaaagaaacaggaaatgttggagaaacaggcacagacaaaccagagtaac
agacttacacacagccctgatcaagtaatcacaccagctcagcagaatggtcagagaact
gaacctcaggagagccaaacagctacaccacaactgcagtttatacaggatggctcttgg
agctgtaagtctaaagacagacaagaagatttgaagaaaactgcctcactggatcgtaaa
ccgagtccacctcagagccagaccacaaggatgaggaggactgggtcgtgtgaaaatgtt
ttagggacacacccatcaaaatcacccacaccatcacaagacacgccacctccatcaccc
agcaggtcagtaagtggaaagaagctttgctccagttgtgcacatccgttgggtaaagga
gcagctatgatcattgaaagcttggggttgtacttccatattcagtgttttaagtgtggc
atatgtaaagggttacttggagacacaagtgctggaactgacgtcagaattcgaaatgga
cttcttaattgtcaagaatgctacataaaatcaagagctgctggccagccaacaacattg
tga
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integrated database retrieval system
