Sinocyclocheilus rhinocerous: 107754209
Help
Entry
107754209 CDS
T04916
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
srx04040
]
107754209
Ion channels [BR:
srx04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107754209
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
107754209
NCBI-ProteinID:
XP_016426066
LinkDB
All DBs
Position
Unknown
AA seq
1108 aa
AA seq
DB search
MQIGKEFVRQNSFYKCVINEEETDLDSADVFELAFKGKAFAIDHRSRKSPEQLSFRDENG
ASPLHYASAGGNVDIIRLIVSVVGPEELNVQDEQGRTPLHWAVEQDQQQSCMLLLELGAD
PNILNGAMMGPLHLAVTKRYNHLVEVLFQSCDKTDANLEGDLGNTPVMMACCTNNCQAIQ
FLFKHGAKMCIQNKLGHYSIHTVAFAGAKEAMELVLEIGEELGLSTSVHINYLDKTKSTP
LHLAVRGGNIEVIKLCIIKGARVDQQQCDKSTALHFACTQGALEAVKIMLSSYNKVEDII
NITDGANQTPLHRATLFDHVELAEYLISKGAEIDCTDCKGLSPLLMASKCCAWKTVAFLL
SIGADFRIKDETGRNFLHFVVLQPKGLKNLPETVLQCNAVKEMLSDEDVEGCTPLHYACK
LGIHDSVKNMLGLNIFVGQKSREKKSALHFAAEYGRINTCKRLLETLTDSKMLNDWDEKG
LTPLHLASRAGHTQVVELLLRSGALFQSDYKGWSCLHHAVAEGYTQTIKILLVANVKLLD
ETNEDGNTALHIAAQAGHVGAVLLLLDRGAEITLNNADNSFLHEAVRNEKKDVVNAIIES
ERFAEAIKSFKATSRCAVMDIIEFLPESFRHLLDRCILESDHDANSSDYHIKYDFRWLQA
PIQLKKYAKTDKTMKFQPLAAVNAMVRYNRLELLTHPVSQKYLEMKWKAYGSKVHLLNLA
VYLLGLLPLTYLILNLRPKQEVFGNNTSVIMVPVSFREQKCLISVCIIMVLVLNVYSVCK
ELAQLAQQQINYFTDFSNLADWCAAISSLVFVIPMCFNLENTWQWEAGAFAILTSWIGFL
LYFQRFERIGIYVVMFGGIVRTLVCIMILFIFLLLAFGLAFYALMLHQDEFSSISLALAQ
TFVMTVGELNYQSTFLHAYENSRMAFPGVTYFIFVLFVLLMPILLMNLMIGLAVGDIAEV
QRNAELKRIAMQIDLHTALEEKLPYWFLKRVDKPSITIYPNKCKKVLMQALIDGEIQNTV
RTRLNLCSRQGGPLERELHKQKNRLKVMSCLLEKQHNLLKLIIQKMEITSEADEYDGPHN
PRALKQPTSSSSQKSKWVPLLQAIRAKK
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgcagattggaaaggagtttgtgaggcaaaacagcttctacaaatgtgtgataaatgag
gaggaaacagacctggattctgcagatgtgtttgagttggctttcaaagggaaggccttt
gccatcgaccaccggagccggaaaagtccggaacagctaagcttcagggatgaaaatgga
gctagtccactacactatgcttcagccggaggaaacgtggacataattcgcctcattgtt
tctgtcgtgggccctgaggagctgaatgtacaggatgagcaggggagaactcccctgcac
tgggctgtagagcaggatcaacagcagagctgcatgttactgctggaactgggcgctgac
cccaacatcctcaacggcgccatgatgggccctctgcatctggctgtcacaaagagatac
aatcatctagtagaggtcctttttcagtcctgtgacaaaacagatgccaatctggagggg
gatctgggaaacacccctgtgatgatggcctgctgcactaataactgccaagctattcag
tttctgttcaaacatggtgccaagatgtgtattcagaacaaattgggtcactactctatc
catacggttgcttttgcaggtgccaaagaggccatggagctggttttggaaattggagaa
gaactgggcctttccacttcagtgcacattaattatttggataaaaccaaaagtaccccc
ctccatctggctgtacgtgggggcaacattgaggtgatcaaactttgcatcattaaagga
gccagagtggatcagcaacagtgtgacaaatccacggccctccactttgcctgcactcag
ggtgctctggaagccgtcaaaatcatgctttcttcttacaacaaagtggaagacatcatc
aacatcacggatggagccaatcagacccccttacatagagccacgttgtttgatcatgtc
gagttggctgaatatcttatttcaaagggagcagaaattgactgcactgactgtaaggga
ctgtctcctctgctgatggcctccaaatgctgtgcttggaaaacagttgcgtttttgctg
tcaattggtgccgatttcagaatcaaagacgaaacaggtcgcaacttcctccactttgtc
gttcttcaaccaaaagggctgaaaaatcttcccgagacagtcttacagtgtaacgccgtg
aaggagatgttgtctgatgaggatgttgaaggctgcactcctctgcactacgcctgcaaa
cttggcatccacgattcggtcaaaaatatgctgggtctcaatatctttgtgggtcaaaag
tcacgggagaagaaatcagctcttcacttcgctgcagaatatgggcgtataaacacatgt
aaaaggctgctggagaccctcacagactctaaaatgctgaacgattgggatgaaaagggt
ctgacgcccctccatcttgcttcaagggcaggacacactcaagttgtggagctgctgctc
agaagtggtgcgctttttcaaagtgattacaaaggctggtcctgtttacatcatgctgtg
gctgagggatacacacagacaataaaaattctcctggtagccaatgtcaaactactggac
gaaacgaatgaggatgggaacacggcccttcacatagctgcacaagcgggacatgtaggt
gctgttttgctgttattggacagaggagctgaaatcactctcaacaatgctgacaactct
tttttgcatgaagctgtgcgtaatgagaaaaaagatgtagtgaacgctatcatcgaaagt
gagaggtttgccgaggcaataaagtcatttaaagcgacatcccgctgtgccgtgatggac
atcatagagtttctcccagagtctttcaggcatcttctggaccggtgtattttagagtct
gatcatgatgccaacagttcagattatcatatcaagtatgattttcggtggcttcaagct
cctatacagctaaagaagtatgccaaaacagacaaaacaatgaagttccaacctttggca
gctgtgaatgccatggtgcggtacaaccgtctggagctcctcactcaccccgtgagccaa
aaatacctggagatgaagtggaaggcgtatggaagcaaggttcatttgctcaacctggct
gtctacctgcttggcttgttgcccctcacatacctcatcctcaatctgagaccgaagcag
gaagtttttggcaacaacacatctgtcatcatggtgcccgtatcttttagagagcaaaaa
tgtttaatctcagtctgtataatcatggtgcttgtcttgaatgtgtattccgtttgcaaa
gagctggcgcagttggctcagcagcaaataaattacttcacggacttctcgaaccttgct
gactggtgtgcagctattagctctttagtctttgtcattcccatgtgcttcaatctagag
aacacttggcaatgggaggctggagctttcgccattctgacttcatggatcggcttcctg
ctctactttcagaggtttgagcgaattggaatttacgtggtgatgtttggtggaatcgtt
aggaccctggtgtgcatcatgattctctttatcttcctattgctcgcatttggattggcc
ttctacgctttgatgctccaccaggatgagttcagctccatcagccttgctctagcccag
acgtttgtgatgacagtgggagagctgaactaccagagcacatttctgcacgcttatgaa
aacagccgcatggcgttccccggggtcacctattttatttttgtgctctttgtgcttctc
atgcctattcttctcatgaacctaatgattggtttggcagtaggagatatcgcagaggta
cagagaaatgcagagttgaagagaatagccatgcagatagatcttcacactgcccttgag
gagaagctaccttactggttcctgaagcgagtggacaaaccatctatcaccatctatccc
aataaatgcaagaaagtgctgatgcaggcgctcattgatggtgagatccaaaacacagtt
cgcacccgtctgaacctctgctcgcggcagggagggcctctggagagagagctgcacaag
caaaagaacaggttgaaagtgatgtcctgtttgctggagaaacagcataacctgctcaag
ctgatcatccagaagatggaaatcacttctgaggctgatgaatacgacggcccacataac
cctagagctctgaaacagcccacttcctcctcatcgcagaagtcaaagtgggtcccgctg
ctgcaagccattagggcaaagaagtaa
DBGET
integrated database retrieval system
