KEGG   Sinocyclocheilus rhinocerous: 107754212
Entry
107754212         CDS       T04916                                 
Name
(RefSeq) polyadenylate-binding protein 1-like
  KO
K13126  polyadenylate-binding protein
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx03015  mRNA surveillance pathway
srx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:srx00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107754212
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107754212
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:srx03019]
    107754212
   03041 Spliceosome [BR:srx03041]
    107754212
Messenger RNA biogenesis [BR:srx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     107754212
   mRNA cycle factors
    Stress granule specific factors
     107754212
Spliceosome [BR:srx03041]
 Complex C
  Other components
   Complex C specific factors
    107754212
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_5 RRM_10
Other DBs
NCBI-GeneID: 107754212
NCBI-ProteinID: XP_016426069
LinkDB
Position
Unknown
AA seq 297 aa
MATSYNWTSGEGSQEPNDHGSSLLVSDLHPDVTEQLLHAIFSPFGPICSVRVCRNTITNR
SRGYGFVTFEHRQHAENALEALNFLELMGKPMCITWAQHITINVLARPSDRPAIYDAVSN
FGEIMKCREGCDRSGESKEKESSSNPQVSLIVNDLHPNVTEQDLHALFFPFGPICTVKVC
RDIRTNLSRGYGFVIFKRRHDAEKALKALTFSELMGKPMNIMWAKDMTVKVLSRDDERGF
RDIYADETEPTESRGRRLANAVKSFFTTSLSSPGTWLGIGLFALAIHRAHCNTVIPV
NT seq 894 nt   +upstreamnt  +downstreamnt
atggcaacgtcctacaattggacttcaggtgagggcagccaagaaccaaatgaccatggg
tcatcattgcttgtcagtgatttgcacccagatgtgaccgaacaattgttgcatgcaata
ttcagcccatttggaccgatctgttctgtgcgagtgtgcagaaacacaataaccaaccgg
tctcgtgggtatggttttgtgacctttgaacaccgccagcatgcagaaaatgccctagag
gctctgaattttttggagctcatgggcaaaccaatgtgcatcacatgggcccaacacata
actattaatgtcctagcaaggcctagtgacaggccagctatatatgatgcagtttcaaac
ttcggggaaatcatgaagtgcagagagggctgcgacaggagcggcgaatccaaagaaaag
gagagcagctctaatccacaagtgtcactgattgtgaatgatctgcacccaaatgtgaca
gaacaggatttgcatgcattattcttcccgttcggacccatctgtactgtgaaagtgtgc
agagatataagaaccaacctgtcccgcgggtatggttttgttatttttaaacgccgccat
gatgcagaaaaggccctgaaggctcttacattttcagagctcatggggaaaccaatgaac
atcatgtgggccaaagatatgactgttaaggtgctatctagagacgatgaaagaggtttc
cgtgacatttatgctgatgaaactgaacccactgagtcacggggaagaaggcttgctaat
gctgtgaaaagttttttcacaacatcgttgagcagcccaggaacctggctgggtattggc
ctttttgccttagccatacacagagctcactgcaatactgtaatacccgtttaa

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