Sinocyclocheilus rhinocerous: 107754346
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Entry
107754346 CDS
T04916
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
107754346 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107754346 (myo5c)
04131 Membrane trafficking [BR:
srx04131
]
107754346 (myo5c)
03029 Mitochondrial biogenesis [BR:
srx03029
]
107754346 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
srx04812
]
107754346 (myo5c)
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
107754346 (myo5c)
mRNA cycle factors
P-body specific factors
107754346 (myo5c)
Membrane trafficking [BR:
srx04131
]
Others
Actin-binding proteins
Myosins
107754346 (myo5c)
Mitochondrial biogenesis [BR:
srx03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
107754346 (myo5c)
Cytoskeleton proteins [BR:
srx04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
107754346 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
ATG16
AAA_22
Myosin_N
Csm1_N
nSTAND3
AAA_16
Motif
Other DBs
NCBI-GeneID:
107754346
NCBI-ProteinID:
XP_016426248
LinkDB
All DBs
Position
Unknown
AA seq
1745 aa
AA seq
DB search
MALSELYTKYNRVWIPDAEHVWQSAEILTDFKPGETVLELQLEDGTELQYPLEGGEKLPP
LRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESKIIYTYCGIILVAVNPYKQLPIYGD
AVIHAYSGQNMGDLDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYFA
VVSKSGSKTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDKRYQIIGANMRT
YLLEKSRVVFQSENERNYHIFYQMCACANQPEFKGLRLLAADKFNYTRLGGETEIEGVDD
HADMAETRRTFSLLGLKDSFQADVFKVLAAILHLGNVVIKENGSEKSSIGSRDPHLAIFC
ELMGINMDNMSRWLCHRRIVLSAETVVKPQPKERAINARDALAKHIYAHLFNWVIHKINQ
ALMIPGKQHSFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKED
IPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFLQGTDKNWLQKLYNFLGSKPLFEKPR
MSNDSFVIQHFADKVEYQCKGFLEKNRDTLYEELVDIMRASQFALLANFFKEEEPNSSHK
MIKVTPAHPRVKASNKQLRTTVGDKFRSSLYLLMETLNATTPHYVRCIKPNEEKLPFEYD
SKRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMSQSELKLGEKKQTCKTVLQ
RLIPDSNQYKFGRSKIFFRAGQVAYLEKLRLDHLRAACVSIQKHVRGWRQRRRFLHMRQA
AITIQQYVRGKKQIRRSITALALKQAWAAVVIQRHCRGYLVRRIYQLVLRAAVIIQAYTR
GWTARKRYRKMVAEHKALVLQKYARAWLVRRRFQTMRRLVINVQLSYRVQQLRKKIEEQN
KENLGLMERLTSLSNARAQGLEKIQALEAELGKLTNEMAALEERARTKSEEANQTIALLQ
SDKEKLTEANKALEQKLKETTLQMQDQFEDVKRKLMEDLEREERFRKVAEHNSELQKEDS
DKEIVVLKEESRRLREERIRLQTQVEEDEKINAELQEQVLQLTKHVKVIPDLRKEINSLQ
MQRAEADKTTRAQNLQARAKMSLITRQLLGEAKEEILIQRLNEEALDNDDGADLLAAFDS
MEKAAKVMETQLREQKDTCKSQQEALVFKNEHLNKENEQLQALFQEKSNVNQSIGQEVAR
LSAENMVIPELKQQVSELNRHKQELETRLQDQSAEMSAKIKELSNKLQLTVEEEQSQRRH
LEEKITESERRREEMERQMADLQEENEQLQKAQLSESEAKNKLRQETSRLTAENMDFEEQ
LDMKDRLIKRLQDQIKAIQTHATASQKAAPAVPKEYLGMLEYKKENESRLIRTLILELKP
RGVGVLMIPGLAAHLLFMCVRHADYLNDGNKLKSLMNGIISAIKEVITNQQESFEVLSFW
LSNTYHFLNCLKQYSGDEEFMKHNTPRQNKNCLRNFDLSEHRQILSDLAINIYHQFISVM
EDALFPMIIPGMLEHESLQGISSMKPTGFRKRSNSVYEDGGDHSGSEPFSVTDILQQLDA
FHTSMAQHGMEPQLQGQVIRQLFFLIGATSVNSILLRKDLCSCRKGMQIRCNISYLEEWL
REKDLQSSCAMETLGPLSQVAWLLQVNKTTDEDAAEIKQRCSELSPVQIVKILNSYTPID
DFEKRVTPSFVRKVQALLQEREGSSQLMMDSQYRFQVTFPFCSSPQALELLQVPSNLRLG
FVTRI
NT seq
5238 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtcggagttgtatacaaagtataacagggtgtggatccctgacgcggaacat
gtttggcaatctgcggagattctgacagatttcaagcctggtgagactgtcctggaacta
cagctggaggatgggacggagttgcagtatcctctggaagggggtgagaagttgccaccc
ctccgtaacccggacatcctggtgggtgagaatgacctcacagccctcagttaccttcac
gagccggccgtgctacacaacctcaaagtccgatttgtcgagtccaaaatcatctacaca
tattgcggaattatcctggtggcagtcaatccatacaagcagcttcctatctatggagat
gcggtcatccatgcttactctggtcaaaacatgggcgacctggaccctcatatatttgct
gtggctgaagaggcctacaaacaaatggccaggaataacaagaatcagtccatcattgtg
agcggtgagtccggggctggaaagaccgtatctgctcgctatgctatgaggtacttcgca
gtggttagcaaatctggcagcaaaactcgggtggaggacaaagttttggcatccaacccg
atcactgaggccattggaaatgcaaaaacaaccagaaatgacaacagcagtcgatttggg
aagtacactgagatcagcttcgacaaaagataccaaatcattggtgccaacatgaggaca
taccttctggaaaagtcaagggtggtttttcagtcagagaatgagaggaattatcacatc
ttctaccaaatgtgtgcatgtgcaaatcagccggagtttaaaggcttaagactgttggcc
gcagacaagtttaattacacacgtttgggtggtgagacagagatcgaaggcgtggacgac
cacgctgacatggcagaaacacgcagaactttcagtctactaggtcttaaggacagtttt
caggctgacgtgtttaaggtgctcgctgcgattctgcatttgggaaacgtggtaatcaag
gagaacggctctgagaaatcgtccatcggttccagagaccctcacttggccatattctgt
gagctgatgggcatcaacatggacaacatgagccgctggctgtgtcacagacggatagtc
ctgtcagcagagacggtggtgaaaccgcagcccaaggaacgtgccatcaacgcccgtgat
gcccttgccaaacacatctatgcccatcttttcaactgggtcatccacaagatcaaccag
gcactaatgatccctgggaaacaacattcatttattggggtgttggatatttatggattt
gagacctttgacgtgaacagtttcgagcagttctgcatcaactacgccaacgagaagctg
cagcagcagttcaacctgcacgtgtttaaactggagcaggaggagtacatgaaagaggat
attccctggacgctgatcgatttctatgacaatcagcccgttattgatctcatcgaggct
aagatgggcattctggatcttttggatgaggagtgtctgttccttcagggcactgataaa
aactggctgcaaaagctgtacaattttctaggctcaaagccgctgtttgagaaaccccga
atgtctaatgactcttttgtgattcagcattttgctgataaggtagaataccagtgtaaa
ggttttttggagaagaacagagacacactttatgaagagctggtggacatcatgcgtgct
agtcagtttgctctcttggcgaatttttttaaagaggaggaaccaaattctagccataaa
atgatcaaggtgacaccggcacatcccagagtcaaagcttcaaacaagcagctgagaacc
actgtaggagacaagtttcgaagttccttgtacctgttaatggagactctgaatgctact
acacctcattatgtgcgttgtattaaacccaatgaggagaaactgccatttgagtacgac
tcaaagcgtgtggtgcagcagctgagggcctgtggtgtgctggagaccatccgtatcagt
gcccagagttacccgtccagatggacgtatatagagttttacagccgttacagtatattg
atgagccagtcggagctgaagctgggagagaagaagcagacgtgcaagacggttctgcag
agactcattcctgattccaaccagtacaagttcggtcggagtaagatcttcttccgggcg
ggacaggtggcgtacctggagaagctgcgtttggatcatcttcgtgcggcttgcgtgagc
atccagaagcacgtgaggggctggaggcagagacgcaggttcctgcacatgagacaagct
gccatcactatccaacagtacgtgcgtggaaagaaacagatcagacgcagcataacagct
ctggcgctgaagcaggcctgggccgctgtggtgatccagagacactgtcgtgggtatctg
gtccggaggatttaccagctcgtcctgagggctgcagtcatcatacaggcctacaccaga
ggatggacggcccgcaagcgctacagaaagatggtggcagaacacaaggctctggttctg
cagaaatacgctcgagcttggctggtgcgccggcgctttcaaaccatgcgacggctggtc
atcaacgtgcagctctcgtaccgagtccagcagctgcgcaagaaaatagaagagcagaat
aaagagaacctaggccttatggaaagactcaccagtttgtctaatgcacgtgctcaagga
ctagaaaagatccaggctctggaggcggagcttggaaagctgaccaatgagatggcagct
ttagaagagagggcgagaacaaagtctgaagaggccaatcagacaatcgctctgcttcag
agtgacaaagagaaacttactgaggcgaataaggctttggagcagaaactgaaagagacg
accctgcagatgcaagatcaatttgaggatgtaaagagaaaactgatggaggatttagaa
agagaggagagattcagaaaggtggcggagcacaacagtgaactacagaaggaagactcg
gataaagagatcgtcgtactgaaagaggaaagccgtagactgagagaggagcgaatcagg
ctccagacgcaagtggaggaggacgagaagatcaatgcggaactgcaggaacaagtgctg
cagctcaccaaacacgtcaaggtcataccagatttacggaaagaaatcaacagcctgcag
atgcagcgagctgaagctgataaaaccacgagagctcagaatctacaagccagagctaag
atgagtttgatcacgagacagctgctcggtgaagctaaagaggaaattctcatccaaaga
cttaatgaagaagccttagataatgatgatggagctgatcttctcgctgcttttgactcc
atggagaaagctgctaaggtgatggaaactcagctgcgggagcaaaaggacacttgtaag
agtcaacaggaagctctggtcttcaaaaacgaacatttaaacaaagagaacgagcagctt
caagctctctttcaggagaagagcaacgtcaaccaaagcatcggacaggaagtggcccgt
ctctctgctgagaacatggtgattccagaactgaagcagcaggtgtcagaattgaaccgt
cacaaacaagagcttgagacccggttacaagatcagagcgctgagatgagcgcaaaaata
aaggagttatcaaacaagcttcagctcactgttgaagaggagcaatcgcagcgcaggcac
ctagaggagaagataacagagagcgagaggagaagagaagagatggagagacagatggct
gacctccaggaggagaacgagcagctacagaaagcccagctctcagagagcgaagccaag
aacaaactccgacaggagacatcccgtctcacagctgagaatatggactttgaggagcag
ctagacatgaaggacagactgataaaacgactccaagaccaaatcaaagcaattcaaaca
catgcgacagccagtcagaaagcagcgccggctgtgcctaaagagtacttgggcatgttg
gagtacaagaaggagaatgaaagcaggctgatccggacgcttatactggagctgaaacct
cgcggtgtgggtgtgctaatgatccctggtctggctgcacatctcctcttcatgtgtgtg
agacacgccgattacctcaatgacggaaacaaactcaagtccctcatgaacggcatcatc
tcagccatcaaagaggtcatcacgaaccaacaggagagttttgaagttctgtccttctgg
ctctcaaacacatatcacttcctcaactgtctcaaacagtacagcggagacgaggagttc
atgaagcacaacactcctcgtcagaacaagaactgcctgaggaacttcgacctgtcagag
caccggcagattctcagcgacctcgccatcaacatctaccatcagttcatcagcgtgatg
gaggacgcgctctttcccatgataatccctgggatgttggagcacgagagtctccaggga
atctccagcatgaagcccaccggtttccgtaagcgctcgaacagtgtgtacgaggacggc
ggggaccacagcgggtcggagccgttcagtgtgacagacatcctgcagcagctcgacgcg
ttccacaccagcatggcgcagcatggcatggagccgcagctgcagggtcaggtcataaga
cagctgttcttcctcatcggagccacgtcggtgaacagcattctgctccgcaaggacctg
tgctcctgccgcaagggcatgcagatcaggtgtaacatcagttatctagaggagtggctg
cgagagaaggatctgcagagcagctgcgccatggaaacgctggggccgctctctcaggtc
gcctggcttcttcaggtcaacaagaccacagatgaagacgcagccgagatcaagcagaga
tgctccgagctctctcctgtgcagattgtgaaaatccttaactcctacacacccattgat
gatttcgaaaagcgtgtcactccgtcctttgttcgcaaagtgcaggcgttgctgcaggag
cgcgaggggtcgtctcagctgatgatggattcacagtatcgtttccaggtcacctttccc
ttctgctcctcaccacaagcactcgaactcctacaggtgcccagcaacctccgtctgggc
ttcgtcactcgcatttga
DBGET
integrated database retrieval system
