Sinocyclocheilus rhinocerous: 107754396
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Entry
107754396 CDS
T04916
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04142
Lysosome biogenesis
srx04144
Endocytosis
srx05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107754396
04142 Lysosome biogenesis
107754396
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
107754396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107754396
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srx04147
]
107754396
Membrane trafficking [BR:
srx04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
107754396
Exosome [BR:
srx04147
]
Exosomal proteins
Proteins found in most exosomes
107754396
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_Vps41
TPR_COPA_B
HEAT_Nup120
TPR_1
LVIVD
Gp18_dom_I
Motif
Other DBs
NCBI-GeneID:
107754396
NCBI-ProteinID:
XP_016426298
LinkDB
All DBs
Position
Unknown
AA seq
1410 aa
AA seq
DB search
MAQILPIRFQEHLQLQTLGVSPASISFSCLTMESDRFICIREKVDEQNQVLIVDLSDPSS
PIRRPITADSAIMNPASKVIALKDDAARTLQIFNMEMKSKVKAHTMTDEVLFWRWISVNT
IALVTDTAVYHWSMEGDSQPINVFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVV
GAMQLFSVDRKVSQPIEGHSAAFGHYKLEGNPNASTLFCFGVRGQAGGKLHIIEVGQPQT
GNQPFTKKAVDVFFPPEAQADFPVAMQIGTKHGVIYLITKYGYFHMYDLESGVCIYMNRI
SAETIFVTAAHESTSGVIGVNKKGQVLSVCVEEENVVNYVTNVLQNPELALRLALRSDLP
GAEELLTHKFNTLFSQGSYTEAAKVAASAPQGVLRTAETVRRFQAVPAQGGQPSPLLQYF
GVLLDRGQLNKLESLELCRPVLQQGRTQLLEKWLKGEKLECSEELGDLVKAADVTLALSV
YLRANVPAKVIQCFAETAQFQKIVLYAKKMGYSPDWVMLLRSVMRSGPDQGLQFAQMLVQ
DEEPLINISQVVDVFMEGNLVQQCTSFLLDALKNNRPEEGPLQTRLLEMNLIHAPQVADA
ILGNQMFTHYERAHIAQLCEKAGLLQRALEHYSDPDDIKRAVVHTHLLNPEWLVNFFGSL
SVGDSVECLRAMLAANLRQNLQLSVQIATKYHEQLGTQTLVELFESFKSYEGLFYFLGSI
VNFSQDPDVHFKYIQAACKTGQIKEVERICRESSCYNAERVKNFLKEAKLTDQLPLIIVC
DRFDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDTIKSLILAVRG
DFSTDQLVEEVEKRNRLKLLLSWLESRVQEGCEEPATHNALAKIYIDSNNSPECFLRENL
HYDSATVGRYCEKRDPHLAFVAYERGQCDLELIQVCNENSLFKSESRYLVRRKDPDLWAQ
VLQETNPYRRPLIDQVVQTALPETQDPEEVSVTVKAFMTADLPNELIELLEKIVLENSIF
SEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISSELYEEAFSIFKKFDVN
TSAIQVLIEHMGNLDRAYEFAERCAEGSVWSRLAQAQLQSGLIKEAIDSYIKAGEPSAYM
EVVDAASRNGNWEDLVKFLQMARKKARESFVETELIFALAKTNRLSELEDFINGPNNAHI
QQVGERCYEEGMFEAARLLFNNVSNFARLASTLVHLGEFQAAVDSARKASCTRTWKEVCF
ACVDGEEFRLAQISGLHIVTHADELEELINYYQDRGYFEELMVLLEAALGLERAHMGMFT
ELAILYSKYKPQRMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAILTM
ITHPTDAWRDASFKELISKVANVELYYKSL
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagattttaccgatccgcttccaggagcatctgcagctgcagacgctgggagtg
agtccggctagcatcagcttcagctgcctgaccatggagtcggaccgcttcatctgcatc
cgagagaaggtggacgagcagaaccaggtgctgatcgtggacctgagcgacccgagcagc
ccgatccgccggccgatcacggcagacagcgccatcatgaacccggccagcaaagtcatc
gctctgaaagatgatgcggcgcggacgctgcagatctttaacatggagatgaagagtaaa
gtcaaggctcacaccatgacggacgaagtgctgttctggaggtggatctcggttaacacc
atcgccctggttacggacacggccgtctatcattggagcatggagggagactctcagcca
atcaatgtgttcgatcgtcacgccagcctcgcgggatgccagatcatcaactacagaacg
gacgagcagcagaagtggctcctgctcatcgggatatcagcgcagcagaatcgggtcgtc
ggtgccatgcagttgttctctgtggaccggaaggtttctcagcccatcgagggtcactcg
gctgcgtttggacattataaactggagggaaacccaaacgcttccacgctcttctgcttc
ggcgtcagagggcaggctggaggaaagctgcacatcatcgaggtcggtcagcctcagacc
ggtaaccagccgttcactaagaaagcagtggacgtgtttttccctcctgaagcacaggcg
gactttcctgtggccatgcagatcggcactaagcacggcgtcatctacctcatcactaaa
tacggttactttcacatgtatgatctggagtcgggcgtgtgtatttacatgaaccgcatc
agtgctgaaaccatattcgtcacggccgctcacgagagcacatctggggtcatcggggtc
aataagaaggggcaggtgctgtcggtgtgtgtggaggaggagaacgtagtaaattacgtg
actaacgtgctgcagaatcccgagctggcgttgcgtttggcgttacgcagcgatcttccc
ggagccgaggagctcctgacacacaagttcaacacgctcttctctcagggcagctacacc
gaagcggctaaagtcgctgcgtcggctcctcagggtgtgttgcgaacggcagagacggtt
cggcggttccaggccgtcccggcgcaggggggccagccgtctccgctgctgcagtatttc
ggggttctgctggaccgcgggcagctcaataagctggagtcgctggagctctgcaggccg
gtgctgcagcagggacgaacacagctgctggagaaatggctcaagggagagaagctggag
tgctcggaggagttgggtgatctggtgaaggcggctgacgtcactctggccctcagcgtt
tacctgcgagcgaatgttcctgctaaagtcatccagtgctttgctgagacggctcagttc
cagaagatagtgctctatgctaagaagatgggatattctccagactgggtgatgctgttg
aggagtgtgatgagatccggtcctgatcagggccttcagttcgctcagatgctggttcag
gatgaagagccgctcatcaacatcagccaggtggtggatgtcttcatggaggggaatcta
gtgcagcagtgtacttcattcctattggacgctctgaagaacaacaggccggaggagggg
cctctgcagacacgcctcctggagatgaacctcattcacgcccctcaggtcgcagacgcg
atcctggggaatcagatgttcactcactacgagcgtgctcacatcgctcagctgtgtgag
aaagccggtttactgcagagagctctggagcattacagtgaccctgacgacatcaaacgg
gccgtcgtacacacacacctgctcaaccccgagtggctggtgaatttctttggctctctg
tctgtcggcgactccgtcgagtgtctgagggccatgttggctgcaaacctgcgtcagaac
ctgcagctgagcgttcagatcgccaccaagtaccacgagcagctgggaacacagacgctg
gtggagcttttcgagtcgttcaagagctacgagggtctgttttattttctgggctctatc
gtgaacttcagtcaggaccccgatgtgcacttcaagtacattcaggcggcgtgtaagacg
gggcagatcaaagaggtggagcgcatctgtcgagagagcagctgctacaacgccgagcgc
gtcaagaacttcctcaaggaagccaaactcaccgatcagcttcctctcatcatcgtgtgc
gaccgcttcgatttcgtccacgacctcgtgctctacttgtaccgtaacagcctgcagaag
tacatcgagatctacgtacagaaggtcaatcccagccggctgccggtggtggtcgggggt
ctgctggatgtcgactgctccgaggacaccatcaagagtctgatcctcgccgtacgagga
gatttcagcactgaccagctggtggaggaagtggagaaaagaaaccgactgaagctgctc
ttgtcttggctggaatctcgtgttcaggagggctgtgaagaacctgctacccacaatgca
ttggcaaagatctacatagacagtaacaacagtcctgagtgcttcctccgagaaaacctg
cactacgacagcgcgaccgtgggccgatactgcgagaagagagaccctcacctcgccttt
gtggcctatgagagaggacagtgtgacctggagctcatacaggtgtgcaatgaaaactcc
ctgtttaaaagtgagtcgcggtatctggtgcggcggaaagatccagatctttgggctcaa
gttctgcaggagacgaacccgtacagacggccgctgatagatcaggtggttcagacggct
ctgccggagacgcaggatccagaggaagtgtctgtgacggtgaaggcgtttatgacggcc
gatctgcctaatgaactcattgaacttctggagaagatcgttctggagaactccatattc
agtgaacacaggaacctgcagaacctgctgatcctgacagccatcaaagcggaccggacg
cgggtcatggagtacatcaaccggctggacaattacgacgctcctgacatcgccaacatc
gccatcagcagcgagctgtacgaagaggccttctccatcttcaagaagttcgacgtcaac
acctcagcgattcaggttctgatcgagcacatgggcaatctggaccgggcgtacgagttt
gcggagcgctgtgccgagggctcggtctggagtcggctggctcaggctcagcttcagtcc
ggtctgatcaaagaggccatcgactcctacatcaaagctggagagccgtcggcgtacatg
gaggtggtggatgctgccagtagaaacgggaactgggaggatctggtgaagtttcttcaa
atggcgaggaagaaagccagagagtcgtttgtggagacggagctcatctttgctctggct
aaaacaaatcgtctgtctgagctggaggactttatcaacggccccaacaatgctcacata
cagcaagttggcgagagatgttatgaagagggtatgtttgaagccgcccggctgctgttt
aataacgtgtctaatttcgctcgtctggcgtccacactcgttcacctcggcgagtttcag
gcggccgttgacagcgcacgaaaggccagctgcacacgcacatggaaagaggtgtgtttt
gcgtgtgtggacggagaggagttcaggttagcgcagatctccggccttcacatcgtcact
catgctgatgaactggaggagctcattaactactatcaggaccgtgggtatttcgaggag
ctgatggtgctgctggaggcggcgttggggctggagcgcgctcacatgggcatgttcacc
gagctggccatcctctactccaaatacaaaccccagaggatgagggaacatctggagctc
ttctggtctcgggtcaacatccctaaggtgttacgagcggctgaacaggcccatctgtgg
gcggagcttgtgttcctgtatgataaatatgaggagtatgacaacgccatcctgacgatg
ataacacaccccaccgacgcctggagagacgcttccttcaaagagctcatcagcaaggtg
gcaaatgtggagctgtattataaatccctgtag
DBGET
integrated database retrieval system
