Sinocyclocheilus rhinocerous: 107754684
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Entry
107754684 CDS
T04916
Name
(RefSeq) transcription factor SOX-6-like isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srx03000
]
107754684
Transcription factors [BR:
srx03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
107754684
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
107754684
NCBI-ProteinID:
XP_016426718
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MLNMEGFLRSSFLLSRIMSSKQATSPFALTPDGGEDGVNQEHMSWEKDENSESLVAPQLP
LHNLLHNKPPPEELQPISSSVPPESDWDSLMLAQQRMESDSNKVCSLYSFRNNSTSPHKP
EEGARERGDLLSSSAFGTPERRKGSLADVVDTLKQKKLEEMTKTEQDESSCMEKLLSKDW
KEKMERLNTDDLLGEIKGTPESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQME
NQCQQMELARQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGHMPPLMIPIFPHDQRTLA
AAAAAQQGFLFPPGMSYKPGDNYPVQFIPSTMAAAAASGLNPLQLQQLYAAQLASMQVSP
GAKMPPLPQPPNSAGPISPSGLKNEKRASTPLAQVKEEGTQPLNLSARPKTAEFIKSSTS
PTQSFFPGNKSSLNSLSKSGGIPSPIGGIGRGLSLDILSSLNSTALFGDQDAVMKAIQEA
RKMREQIQREQLQHHQQGIEAKLSALTSMGLNNCRSDKDRSHYNNLGHHLGKLGEDGKIG
HRVIDLTRPEDFEGCKELNGSADKPHQYYCWPTGGASTADARVYREPRGRNSNEPHIKRP
MNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMTNQEKQPYYEEQARLSKIHLEK
YPNYKYKPRPKRTCIIDGKKLRIGEYKQMMRSRRQEMRQFFTVGQQPQTQIPITTSAGVV
YPGAITMATTTPSPHMTSDCSSASASPEPTIPVIQSTFNMKMEPGTMVSNAPVNGEDEMD
MYEDFEDEPKSDYSSENDTQEPVSAN
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacatggagggctttctgcgtagcagctttttactgagcagaatcatgtcttcc
aagcaagccacctctccattcgccttgacccctgatggaggcgaggatggagtgaatcag
gagcacatgtcctgggaaaaagatgaaaactcagagtcattagtcgcccctcagctgccc
ctgcacaatctgctccacaacaaacctcccccggaggagctccagccaatcagcagcagc
gtgccgcccgaatccgactgggacagcctgatgttggcccagcagcgcatggaatcggac
agcaataaagtatgttccttatactccttccggaataactctacctctccacacaagcca
gaggagggggccagggagcgcggcgacctgctgagcagttcagcctttggaacgccagag
cgccgcaaaggaagcctggccgatgtggtggacacactgaaacagaagaaactagaggag
atgacaaagacagagcaagacgaatcctcctgcatggagaaactcctttctaaagactgg
aaagagaagatggagcgacttaacacagacgatctgttaggagaaattaaaggtactcca
gaaagtctcgcagagaaggagcgacagctctccaccatgatcacacagctcatcagcctt
cgagagcagctcctggctgcccatgatgagcagaagaaactggccgcctcacagatggag
aatcaatgtcagcaaatggagctggcacgccaacagcaagagcagattgccagacaacag
cagcaacttctgcagcaacagcacaaaatcaatctcctccagcagcagatccagcaggtc
cagggtcacatgcctcctctcatgatccccatttttccacatgaccagcgcactctggca
gcagccgcggcagcccagcagggcttcctcttccccccaggcatgtcctataagccaggt
gataactacccggtgcagttcattccatccacaatggcagctgcagccgcgtcaggactc
aaccctctccaactccagcaactctatgccgcccagctggccagcatgcaggtctctcca
ggagccaagatgcctccgctgccccagcccccgaattctgctggacccatctccccgtct
ggcttgaagaatgaaaagagggcctcaaccccactggctcaagtcaaggaggagggaacg
cagcctctcaacctctccgcccggcccaagacagctgagtttatcaaatcctccacatcc
ccgacacagagcttcttcccaggcaacaagagcagcctgaacagcctgtccaagagcgga
ggcatccccagccccatcggaggaataggccgtggcttgtctctggacatcctgtccagc
ctgaactcaacagcgctgtttggagatcaggatgcagtaatgaaggccatccaggaagcg
aggaagatgagggagcagattcagagagagcagcttcagcatcatcagcagggaatagag
gccaagctgtctgccctcaccagcatgggcctgaacaactgcagatctgataaggacagg
tctcattacaataacctgggccatcacctgggcaaactaggcgaggatggaaagattggt
cacagagtcatcgacctcaccaggccagaggatttcgaggggtgtaaggaactgaatggc
tctgcagataaaccacatcagtattattgttggccaacaggaggcgccagtactgccgat
gcacgggtctacagggaaccccggggaaggaacagcaacgaacctcacatcaaacggccc
atgaacgccttcatggtctgggccaaagatgagcgccgcaaaatccttcaggccttccca
gacatgcacaactccaacatcagcaaaatattgggatctcgctggaagtccatgacaaac
caggagaaacaaccatattatgaggagcaggcacggctcagcaagatccacctggagaag
tatcccaactacaagtacaagccccggcccaagcgcacctgcatcatcgatggcaagaag
ctgcgcatcggcgagtacaagcagatgatgaggtcgaggaggcaggagatgaggcagttc
ttcactgtggggcaacagccacagacgcagatccccatcaccaccagcgcaggtgtcgtc
taccccggtgccataaccatggcgaccactacgccctcccctcacatgacgtcagactgc
tccagtgcctcggccagccccgagcccaccatccccgtcatccagagcaccttcaacatg
aagatggaaccgggcaccatggtgtctaacgcccccgtgaacggagaggatgagatggac
atgtacgaggactttgaggacgagcccaaatcggactacagcagtgagaatgacacacag
gagccggtcagtgccaactga
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