Sinocyclocheilus rhinocerous: 107754784
Help
Entry
107754784 CDS
T04916
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like
KO
K23619
collagen type XXVIII alpha
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
srx01002
]
107754784
Peptidases and inhibitors [BR:
srx01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
107754784
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
DUF1194
CBM-like
DUF5947
Motif
Other DBs
NCBI-GeneID:
107754784
NCBI-ProteinID:
XP_016426857
LinkDB
All DBs
Position
Unknown
AA seq
1138 aa
AA seq
DB search
MQCGVMLCVLLLILSSSARNQKRRKNRQKPDNSVMQNEVKTLFCPVELAFLVDSSEKAKM
LLFERQREFVVRFSTRLMQLQVSGWRMRVRLALLQYSSTVSVEHNFRDWQDIDVFHSQVD
AMTYIGHGTYSAYAISNATRLFTRETSPSSLRAALLLTEGVDHPRSPSAVSAAADAKNHN
IRMFVIGLSGSTRDEQDNGRLRSIASAPPQQHLFSLTDPQLDDKLFRELSELANTVCPQP
KSCQCEKGERGPPGNPVSLYQHCGGKGECGAPGMKGDQGPDGPPGPRGPRGDQGLSGNPG
DSGPEGPVGPKGKRGPSGPTGPPGDPGVGFPGAKGEKGGQGRPGPTGPVGIGEPGLPGPP
GPSGVQGNQGFPGEGLPGPKGDRGFEGPKGGRGPPGISIKGDKGNTGEAGLPGLMGFPGV
GLQGEKGDPGPIGPPGPRGPPGVGMVGTKGDQGFPGESGPQGERGIGEPGPKGEPGPDGA
PGIPGIPGEDGSVGPKGEVGLPGARGSEGSAGRGIPGEKGDRGDRGPLGLPGSAGAAGPP
GAKGEPGSLGMMGLRGPPGRGLPGSKGEPGPAGPTGPVGEPGVGTTGPKGDRGSPGQVGP
QGMKGEGYPGPQGLPGLPGPPGEVGPEGQGIPGPKGDRGSPGTTGPSGPPGIGLMGPKGA
VGQPGAPGLPGPQGEGIQGPKGDPGFQGPPGPRGPPGDGLPGEKGNRGLAGERGRKGEGG
EHGMPGQTGAKGKPGEKGEPGLSRDQVIRIIREICGCGLKCRTSPLELVFIIDSSESIGP
ENFDLVKDFVNALIDRVSVSHEATRVGVVLFSHMDVVVTSLQHLSDQASVKAAVRRMPYL
GEGTFTGSAIHRATQLFRAARPGVRKVAVVLTDGQADKRDAVRLKDAAEEAHNAGIEIFV
VGIVNSSDAQYTEFKIEMNILASDPDEHYVYLIGDFMSLHTLESKLLSQICESVDGPLFS
LNGKTFPPVEPEPVPYRTEAPTRSYFITEDKEDALPTEFEITSSPDDYDDMHIDNNWTPF
VDGFLNELPKVTDAPVGDKTRQSSISVLGPQTPINWRPVPEISPPPRTLPAPAPQPNDFM
KGVGCRQGLDPGPCREYRVMWYYDPEANACAQFWYGGCQGNSNRFETEDLCQNICVQT
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgtggtgtgatgctgtgtgtcctgctgctgatactgtcctctagtgctagaaac
cagaagagaagaaaaaacagacagaagccagacaacagtgtcatgcagaatgaagtcaaa
actctgttctgtccagtggagttggcgtttttagtggacagttcagagaaagccaaaatg
cttctgtttgagaggcagagggagttcgtggtgcgcttcagcaccaggctgatgcagcta
caggtgtcgggctggcgtatgcgggtgagactcgccctcctgcagtacagcagcaccgtc
tcagtggagcacaacttccgcgactggcaggacattgacgtgttccacagccaagtggat
gccatgacttacatcggccatggcacctactcagcttacgccatctcaaacgccactcgg
ctcttcacccgcgagacgtcgcccagcagcctaagagcagcgcttctgttgacggaaggg
gtggaccacccgcgcagccccagtgctgtgagtgcagccgcagatgccaagaaccacaac
atccgtatgtttgtcattgggctgtcgggatccacacgagatgagcaggacaatggtaga
ctgaggtccatcgccagcgcaccgcctcagcagcacctgttcagcctcactgacccacag
ctggatgacaagctcttcagggaactgagtgaacttgcgaacacagtttgtccacaaccc
aaatcttgtcagtgtgaaaaaggagagagaggtcctcccggaaatccagtgagtttatat
caacactgtggcgggaaaggagaatgtggcgccccagggatgaaaggagatcaaggcccg
gacggacccccaggaccacgtggaccacgaggagatcagggactgagtggaaaccctggc
gactctggccctgagggccccgtcggacctaaaggtaagcgaggacctagcggacccacc
ggccctccaggggacccaggggttgggtttcctggtgcaaagggggaaaagggtggccaa
ggcagacctgggccgactgggccagttggtatcggcgagccaggactgcctggcccacca
ggaccttcaggagttcaaggcaaccaagggtttcccggagagggtttaccaggaccaaag
ggtgacagaggatttgagggtcctaagggtggacgtggacctcctgggattagcatcaag
ggtgataagggtaacacaggggaagcgggtttgcctggactgatgggatttccaggagtt
gggctccagggtgaaaagggagacccgggacccataggaccacctggcccaagaggccct
cctggagtgggcatggtgggaactaagggtgatcagggctttccaggagaatctggacca
caaggtgagagaggaataggagaaccaggaccaaaaggagaaccaggcccagacggagca
cctggtattcctggtatcccaggtgaagatggatctgtgggtccaaagggtgaggtgggt
ttacctggtgctcgaggttcagagggctcagccgggagaggtattcctggtgagaagggg
gaccgaggggacagaggacctctgggtctcccaggaagtgcaggagcagcaggaccccca
ggggccaagggagaaccaggaagtttaggtatgatgggtttacgaggacctccaggtcga
ggattacctggttcaaagggagagccaggacctgcaggccccacgggtcctgttggagag
ccaggtgttgggaccacaggccctaagggtgacagaggaagtccaggacaagtggggcca
caaggaatgaagggggagggttaccccggaccacaggggcttccagggttgcctgggccg
ccaggtgaagttggacctgaaggacaaggaattcctggaccaaagggagaccggggctca
cctggaacgaccggcccttcagggcctccagggattggactgatgggaccaaagggtgca
gttggccagcctggtgctcctggtcttccaggacctcaaggagagggaattcagggtccc
aagggagatcctgggtttcaagggccccctggccctagagggcctccaggtgatggtctg
cctggagagaagggtaacaggggcctagcaggggaacgtgggagaaaaggagagggagga
gaacatggaatgcctggacaaacaggagccaagggaaaaccaggagagaagggagagccc
ggcctatctagagaccaggtgatcagaataatccgggaaatatgtggatgtggtctgaag
tgcaggacgagtcctctggagctggtctttatcatcgacagctcagagagtataggtccg
gagaactttgatctggtgaaggatttcgtgaatgctctgatcgatcgcgtgtccgtgagc
catgaagccacacgtgttggggtggtgctcttcagtcacatggacgtggtggtgaccagc
ctacaacatctctccgaccaggcaagtgttaaagctgctgtgcgcaggatgccgtacctg
ggcgagggcaccttcacgggcagcgccatccaccgggccactcagctcttccgagcagca
cggccaggcgtaagaaaggttgcggtcgttctgacggacggtcaggctgacaagcgggat
gcagtgaggttgaaagacgccgcggaagaggctcacaatgctgggattgaaatcttcgta
gttggcatcgtgaacagcagtgatgcccagtatacagagtttaagattgagatgaacatt
ttggcatctgatcctgatgaacattatgtctacttgattggtgacttcatgagcctgcac
acactggagagtaaactgctgagtcagatctgtgagagtgttgatggaccgctcttcagt
ctgaacggcaaaacattccctccagttgagcctgagccagttccatacagaactgaggct
cccaccaggagttatttcatcacagaggacaaagaggatgcacttccaacagagtttgag
atcacttcttctccagatgactatgacgacatgcatattgacaacaactggacgcccttt
gttgatgggtttttaaatgagcttcctaaggtgacagatgccccagttggagataagacg
agacaatcctccatctcagtattgggaccccagacacccataaactggcggcctgttcca
gaaatcagcccaccaccacggactctacctgcaccggcccctcagcctaacgatttcatg
aaaggggtaggctgtaggcagggattggatcctgggccgtgtcgggagtacagggttatg
tggtactacgacccggaggccaacgcatgcgcacagttctggtatggtggctgccaaggc
aacagcaaccgctttgagacagaagacctttgtcaaaacatttgtgtacagacataa
DBGET
integrated database retrieval system
