Sinocyclocheilus rhinocerous: 107755155
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Entry
107755155 CDS
T04916
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04510
Focal adhesion
srx04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107755155
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107755155
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
107755155
NCBI-ProteinID:
XP_016427345
LinkDB
All DBs
Position
Unknown
AA seq
1772 aa
AA seq
DB search
MWILQITALTISIALHTLAQLPDHNDKCAEGSCYPATGDLLIGRAHRLAASSTCGLDGPD
RFCIVSHLQDETDCFECDSRRMYNEFTNPNSHTIENVVTTFAPNRLKTWWQSENGVENVT
IQLDLEAEFHFTHLIMTFKTFRPAAMLIERSADYGRSWQVYRYYAFHCTESYPHVPQGPI
RKVDDVICDSRYSGIEPSTEGEVIFRALDPAFKIPDPYSPRIQNLLKITNLRIRMEKLHT
LGDDLFDDREGVKKKYYYTLYDMVVRGNCFCYGHASKCAPVGNEAGVEGMVHGHCMCNHH
TTGLNCEECEDFYQDLPWRPAVGRETNACKRCECNHHSYSCHFDMAVYLSSGNRSGGVCD
DCQHNTEGQWCENCKPFYYRHPGRNIRDPRICEPCDCDPRGSLNGGLCDSATDVLRDMIA
GQCRCKANVEGQRCDHCKKGHYGLSDDPLGCRSCSCNPLGTLPAGSPCDIQTGSCYCKRL
VTGRNCDQCLPQHWGLSNDMDGCRPCDCDVGGALNNNCSRETGQCACKKHMFGRRCDQVH
SGYYFAALDHYIYEAEDASFGAEVKVLQRPLSLDRKPTWTGKGFANVPEGETLRFNIYNL
PRSMEYNLMIRYEPLLPDEWEQVVVQIERPRGTYPAAHCTSTYNDEQTVSLHPGSRYAVL
PGPVCLEKGQNYTAKISFPQYSSYSYHSSPHTLVDSIVLLPEVQDLDLFSGGPQQREDWE
MFQKYRCMERSQSVIKIPLMDICRDYIFSVSALLHNGALECKCDPQGSLSTVCDNIGGQC
QCRPNVLGRNCDTCAPATYLFGPSGCRPCDCNPLGSQNLFCHPTMGQCLCVPGAYGQQCG
NCKPNHWGFPQCQPCFCNGNSEQCHPVTGKCLNCRGHTTGHNCERCESGYHRNTLLGSSE
TCRPCMCPNGPGSGMQFAESCYQNSNSLQMVCVCSSGYKGPKCEECASGYYGNPQVPGGR
CHPCQCNRNINMQDPESCDARTGACLKCLFHTDGNACQYCSHGYYGDARTQNCRRCMCHL
VGSSRQRCVDGLCECDRVSGQCPCLPGVVGQHCDRCAPNTWNINSGKGCQPCQCHPEHSY
TSSCDLLTGQCSCKPGFGGRTCEECRELFWGNPEVQCHACNCDPRGIATQQCNKMTGECV
CVEGVAGRRCDSCGRGYAGTFPDCEACHLCFREWDVNVGELTNHTQRLVDTVEEIKETGV
ATPYKDIISSLDDETKQLRQILEDDKVQQTLTHMQRMLQQANETASLLRKSMDRSVTDLE
KVSADHQQAVENLKSLTKEAQNLQEISSDKQQQVLNIKHSDPRGAADSIREYYRESGEAE
FRVNQAVSDPESTVKESAQIRKAAEAKLDSTEKEFNLKHQLHLQRLDKIGSELDSADLSR
LSHQVCGGASGLDGCGNCGGLGCVSEDGTSQCGGEGCETIVTQSQKALNEAKNSDQEVLH
ALREVDELNKMVSDARGRADEAKLNAQDVLLRANQSKTRVEQTNEELRDLIQQIRDFLTN
ETDPKRIEEVADEVMKLSLPVSPGALKNVTTEIRQHVARLTHVEDILTQTAENAHTAERL
LQEAQAANETATALKQATDEAKETLEDTERAQTAAGEKLKEVERDVNQTKQQITDVQSKT
EATEFKLSSSTGRFLDLEREVDELQQKTLETSNSADEAQRQTEYITAEIGHTEREIDSLV
QPKYQLASGLIDQKAAGVVDARQKAEKLHQEAKDLLIDATSKLQRLRELERSFVVNQHIL
VEKAQELDGLENEARDVLQELSQKITIYSTCA
NT seq
5319 nt
NT seq
+upstream
nt +downstream
nt
atgtggattctccagattacagctcttacgatatctattgctttgcacaccctggcacaa
ttacccgatcacaatgacaagtgtgcagaggggagttgttaccctgctacaggtgatttg
ctgataggaagagcacatcggcttgcagcctcctccacctgtggactggatggaccagat
agattctgcattgtcagccatttgcaggatgaaacagactgttttgaatgcgattctcgg
cgtatgtacaatgagttcaccaaccccaacagccacaccattgagaatgtggtgacaact
ttcgctcccaaccgcctcaaaacctggtggcagtccgagaacggagttgaaaatgtgacc
attcagctggatttggaagccgaattccacttcacacacctcatcatgacctttaagacc
tttcggccggcagccatgctgattgagcgttccgcagattatgggcgaagctggcaggtg
taccgttactacgctttccactgtactgaatcctatccgcacgtccctcaggggccaatc
agaaaagtggatgatgtcatttgtgacagccgctattcaggcattgagccatcaacagaa
ggagaggtcatttttagggcacttgatcctgcgtttaagatccctgacccttacagccca
cgcattcagaacttactgaagattacaaacttgcgcatacggatggaaaagttgcacact
ctaggtgatgatctgtttgatgaccgagagggggtgaaaaagaaatactattacactctc
tacgatatggtcgtccgtggcaactgtttctgctatggccacgcctccaagtgtgcaccg
gtcggcaatgaggcaggggtcgagggcatggttcatggtcattgcatgtgcaatcaccac
actactggactgaactgtgaagagtgtgaggacttttaccaagatctgccctggagacca
gcagtgggtcgagagacaaatgcatgcaagagatgtgagtgtaaccatcactcgtattcc
tgtcattttgacatggcggtatatctgtcatcgggaaataggagtggaggagtgtgtgat
gactgtcagcacaacacagagggccaatggtgtgagaactgcaaacccttttactacagg
caccctggcagaaacatcagagaccccaggatctgcgagccctgtgattgtgacccacgt
ggttctctgaacggaggcttatgtgacagcgctacggatgttctaagagatatgattgcc
ggacagtgtcgttgcaaagctaatgtggagggacaacgttgtgaccactgtaaaaaggga
cattatggcctcagtgacgacccattaggctgtcggtcatgcagctgtaatcctctaggc
acactcccagcaggaagtccctgtgatatacagacaggaagctgttactgcaaacgtctt
gtgactggacgaaattgtgaccagtgtctgccgcagcactggggtctcagtaatgatatg
gatggctgcagaccatgtgactgtgacgtaggtggggctttgaataataattgttctcgg
gagacaggacagtgtgcttgtaagaagcatatgtttggtaggcgatgtgaccaagtgcat
tctgggtactactttgcggcactggaccactatatttacgaagctgaggatgcttccttt
ggagcagaagtaaaagtgcttcagagaccgttatctttggatcgtaaaccaacctggacg
ggtaaaggatttgcaaatgtaccagagggtgaaacactgaggttcaacatttacaattta
ccacgatctatggagtacaacttaatgatccgctatgaaccactgttgccagatgaatgg
gagcaggttgtagtacagatagagcggcccagaggcacttacccagcagcacattgcact
tctacatacaacgatgagcagaccgtctcactgcaccctggatccagatatgcagttctg
cctggcccagtgtgtttggagaagggtcagaattacacagcgaaaattagcttcccacag
tactcatcatacagctatcactcttctcctcacacacttgtcgattcaatagtgctttta
ccagaggtgcaagacctggatctattttctggcggaccccagcagcgggaggactgggag
atgttccagaaatacagatgtatggaacgcagccagagtgttattaaaatccccctaatg
gatatttgcagagattacatcttcagtgtgtcagcactactacacaatggagctctggag
tgcaagtgtgacccccaaggttctctgagcacagtgtgtgacaatatcggtgggcagtgt
cagtgtcgacccaacgttttaggaaggaactgcgacacctgtgccccggccacctacctg
tttggaccctcaggatgtagaccatgtgactgtaacccactgggctctcagaacctattc
tgccaccccaccatgggccagtgtttatgcgtgccaggggcatatgggcagcaatgtggc
aactgtaagcccaaccattggggcttccctcaatgccagccctgcttctgtaacggaaac
agtgaacagtgccacccagttacgggcaagtgtctgaactgcaggggtcacaccacaggc
cacaactgtgagaggtgtgaaagtggttatcaccgtaacacgctgctgggctccagtgag
acgtgtcgcccttgtatgtgtcctaacggacctggaagtggaatgcagttcgctgaaagc
tgttaccaaaattccaactctctccaaatggtgtgtgtctgcagctcaggctacaaagga
ccaaagtgtgaggaatgtgcctctggttactatggtaaccctcaggtcccaggagggcgg
tgccatccgtgtcagtgtaacagaaatattaacatgcaggaccctgaatcatgtgacgcc
cgcactggtgcctgtctcaaatgcctgtttcacaccgatggcaatgcatgccagtactgc
agtcatggttattatggagatgcccgtactcagaactgcaggagatgcatgtgccatctc
gtgggaagttccaggcaaagatgtgttgacggcttgtgtgagtgtgacagggttagcggc
cagtgtccatgtctgcccggcgtggtgggtcagcactgtgaccgctgtgcccccaacaca
tggaacatcaacagtggcaaaggatgccaaccttgccagtgccaccccgaacattcttac
acgtcctcctgtgatctgctgaccggtcagtgttcctgtaagcctggttttggaggcagg
acgtgtgaggagtgcagggaactgttctgggggaatcctgaggtccagtgccatgcatgc
aactgtgatcctcgaggcattgctactcagcagtgtaataagatgaccggcgagtgtgtg
tgtgtagagggtgtagccgggcggaggtgtgactcatgtggacgtggctacgctgggacc
tttcctgactgcgaggcctgtcatctgtgtttccgtgaatgggatgttaatgtgggagag
ctgaccaatcacacgcagagactggtggatacagtggaggaaattaaagagactggcgtg
gctacgccctataaagacatcatatcgagtctggatgatgaaaccaaacagctcagacag
attctggaagatgacaaggttcagcaaacgctcacacacatgcagaggatgctgcagcaa
gccaatgagacagcatcactcctgagaaagtctatggaccgatctgtaacagatctggag
aaggtatctgctgaccatcagcaggccgtggagaacctaaaaagcctgacgaaggaggcc
caaaacctacaagagatctcctctgacaaacagcagcaggttctgaatattaaacattca
gaccccagaggtgcggcggacagcatcagagagtattacagggaatctggcgaggccgag
tttcgtgtcaatcaagctgtctctgacccagaaagtacagttaaagagtctgcccagata
cggaaagctgcagaggccaaattagacagcacagagaaagaatttaacctgaaacatcag
ctgcatttacagaggctggacaaaattggatctgaactggactctgcagacctttcacga
ctaagccatcaggtgtgcggaggggcgtcaggtctagatggttgcggtaactgtggtggt
ctgggatgtgtgagcgaggatggcacgtcccagtgtggtggggaaggatgtgagaccatt
gtgacacaatcccaaaaggccttgaacgaagccaaaaactcagaccaagaggtcctgcat
gctttaagagaagtagatgagctaaacaagatggtgtcagatgctcgaggacgtgcggat
gaggccaagctcaatgctcaggatgtgttactgagagccaatcagagcaaaacacgagtg
gagcagaccaatgaggagctcagagacctcattcagcaaatacgagacttcctcacaaac
gaaactgatccgaagcgtatagaggaagtagctgatgaggtgatgaaactgagtttgcca
gtgtcgcccggtgcactaaagaacgtgaccacagagatccgccaacatgtggccagactg
acccatgtggaggatattctgacccagacggcagagaatgcgcatactgcagagagactc
ctgcaagaagcacaggctgccaatgagacagctacagcactgaaacaggccactgatgag
gcgaaggaaactctagaggacactgagcgcgctcagactgctgccggcgaaaaactgaaa
gaggttgagagagacgtgaaccaaacaaaacaacaaatcactgatgtacaatcaaaaacc
gaagcgactgagttcaaactaagtagcagcacaggaaggtttctggatcttgagagagag
gttgacgaactccaacagaaaactctagaaacatccaacagtgcagatgaagctcagaga
caaactgagtacatcacagcagaaattggccacacagaacgggagattgactcactcgtg
caacctaagtaccaactggccagtggtctgatagatcaaaaggcagcaggtgtggttgat
gcacgtcagaaggccgagaaactacatcaggaagcaaaagatctattaatagatgccaca
agcaaactgcagagactgagagagctggagagatcatttgtggtaaatcagcacattctg
gtggagaaagctcaggagctggatgggctggagaatgaggccagagatgtactgcaagaa
ctcagtcagaaaatcaccatctacagcacctgcgcttaa
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integrated database retrieval system