Sinocyclocheilus rhinocerous: 107755534
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Entry
107755534 CDS
T04916
Name
(RefSeq) thrombospondin-2-like isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04145
Phagosome
srx04510
Focal adhesion
srx04512
ECM-receptor interaction
srx04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107755534
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107755534
09144 Cellular community - eukaryotes
04510 Focal adhesion
107755534
09142 Cell motility
04820 Cytoskeleton in muscle cells
107755534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107755534
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srx04147
]
107755534
00536 Glycosaminoglycan binding proteins [BR:
srx00536
]
107755534
Membrane trafficking [BR:
srx04131
]
Endocytosis
Phagocytosis
Opsonins
107755534
Exosome [BR:
srx04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107755534
Exosomal proteins of colorectal cancer cells
107755534
Exosomal proteins of bladder cancer cells
107755534
Glycosaminoglycan binding proteins [BR:
srx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107755534
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
EGF_3
Laminin_G_3
TSP1_ADAMTS
cEGF
TSP1_CCN
EGF
Motif
Other DBs
NCBI-GeneID:
107755534
NCBI-ProteinID:
XP_016427860
LinkDB
All DBs
Position
Unknown
AA seq
1183 aa
AA seq
DB search
MILRRCLRMLALLLHFTFVKSQDAQMEDETVFDLFETSGITRKTIGVKLFKGLDSDAPAY
RFIRFDQLPSVSSTAVQKLLLQIQNNEGFILTATLRQDRTSRGTILALEGPGERRQFEVV
SDGRTNTLDLVYWWADGSRNVISFEDVDLSDSQWKNVTLYVHGETATLYIGCGLIDSFIL
DEPFYEHLTATGGHMYVAKGATRESHFRGLLQNVRFIFDTPLEDILESRGCDLGNPEEAN
VVSESAEVVEVPSSIATNVIGQNTDVPATSSSELMCERSCEELANLLQELKGLRVVVSNL
IDGLQKVTEENTAMKEALNKMQSLSEQTMCWQDGRMFEDKEDWIVDSCTKCTCKKGKVVC
RQITCPPVACANPSFIDGECCPVCLPMDSEDGWSPWSEWTQCTVTCGSGTQQRGRSCDDT
SNTCSGPSIQTRKCSLGKCDRRVRQDGGWSLWSPWSSCSVTCGEGLITRIRHCNAPVPQR
GGKDCEGDGRETQGCHMDPCPIDGGWGPWSPWAMCSATCGGGLKSRVRECNSPEPQHGGR
KCLGDSTENEVCNRQECPIDGCLSNPCFSGVECITASDGSWECGPCPNGYRGNGTSCEDV
NECDMVSDLCHKVGGLQQCVNTDPGFHCLPCPTRYKGTQPYGMGVESAKTNKQVCEPYNP
CKDNSHSCHKYAECIFLSHFSDPMYKCECRIGYAGDGIICGEDFDLDGWPNQDLVCGANA
TYHCKKDNCPTLPNSGQEDFDNDGQGDACDKDDDNDEIVDERDNCPLMYNPRQYDYDKDD
VGDRCDNCPYEHNPAQTDTDNNGEGDACSIDMDGDEILNERDNCPLIYNTDQKDTDLDGV
GDQCDNCPLVHNPQQTDADNDLIGDQCDDNQDIDEDGHQNNMDNCPYIPNANQADHDGDG
KGDACDHDDDNDGIPDDRDNCRLVSNKDQMDSDGDGRGDACENDFDNDKVPDIFDACPEN
SAISVTDFRKFQMVHLDPKGTTQIDPNWVVRNQGKELVQTANSDPGIAVGFDEFSAVDFS
GTFYVNTDRDDDYAGFVFGYQSSRRFYVVMWKQITQTYWEDKPSKAFGISGVSLKVVNST
TGTGENLRNALWHTGNTKQQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGFIRVVVYEGK
QIMADSGPIYDKTFAGGRLGLFVFSQEAVFFSDLKYECRGEQI
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgattctccgaagatgtctccgaatgttggcccttttgcttcacttcaccttcgtaaaa
tctcaagatgcacaaatggaagatgagaccgtttttgacctgtttgaaaccagtgggatc
acacgcaagactataggtgtgaagcttttcaagggtctggacagcgatgctccagcatac
cgcttcatccgttttgaccagctcccctcggtcagctccacagcggtacaaaaacttctt
ttgcagatacaaaacaacgaaggcttcattctgacagccactctgcgccaggaccgcaca
tcccgtggcaccattcttgcactggaaggccctggagagcgcaggcagtttgaagttgtt
tcggatggaagaaccaacactttagatttggtgtactggtgggctgatggctcacgcaat
gtgatctcttttgaggatgtagacctctcggattcacagtggaagaatgtaacgctttat
gtgcatggagagacagcaactttgtacattggttgtggactcattgatagctttattctc
gatgaacctttctatgaacacctgaccgccacaggtggtcatatgtatgtggccaaaggg
gccacacgagaaagccactttaggggcttgctgcagaatgtacgttttatctttgacacc
ccacttgaggacattctggagagcaggggatgtgatcttggaaacccagaggaggcgaat
gtagtcagtgagagcgcagaggtggtggaggttccatcttcaattgccaccaatgtgatt
ggccagaatacagatgttccagcaaccagctcctcagaactgatgtgtgaacggtcctgt
gaagaactggccaacctcctccaggagctcaagggtctcagagttgttgttagcaacctt
atagatggtctgcagaaagtgacagaagaaaacacagcgatgaaggaggcactaaataag
atgcagagtctttcggagcagactatgtgttggcaagatggccgtatgtttgaggacaaa
gaggactggattgtggatagctgtactaaatgtacctgcaaaaagggaaaagtggtttgt
cgtcaaatcacttgtcctccagtggcatgtgccaatccatccttcatcgatggcgaatgc
tgtccagtttgccttccaatggacagtgaagatggctggtctccatggtcagaatggact
cagtgcacagtcacatgtggaagtggcacacaacagagggggcgctcttgtgatgacaca
agcaatacatgttctggaccctcgattcagacacgcaagtgcagtttgggaaaatgtgac
cgcagagtccgtcaggacggtggctggagcttatggtctccatggtcatcctgctcagtg
acgtgtggagagggtctgatcacacgtatccgtcactgcaatgctcctgttccacaaaga
ggtggaaaagactgtgaaggtgacggacgagagacacaaggttgccacatggacccctgt
ccgattgatggtggctggggtccatggtctccttgggcaatgtgttcggctacatgtgga
gggggtctgaagagtcgtgttagggaatgtaacagccctgaaccacagcatggaggaagg
aagtgtcttggagactccactgaaaatgaagtatgcaaccgacaggagtgtcctattgat
ggctgtctttcgaacccttgcttctccggagtcgagtgtatcacagcttctgatggatcc
tgggaatgtggaccctgcccgaatggttatcgtggcaatggaacttcctgtgaagatgtc
aatgagtgtgatatggtatcagatctgtgtcataaggtgggtggcctacagcaatgtgtg
aatacagaccccggattccactgtctcccctgccccacgcgctacaaagggactcagccc
tacggcatgggagtggagtcagctaaaaccaacaaacaggtgtgtgaaccctacaacccc
tgcaaggacaacagccacagttgccacaagtatgctgaatgcatcttccttagtcacttc
agtgacccaatgtacaagtgcgagtgccgtatcggttatgctggagatggtatcatctgt
ggagaggactttgatctggatggatggcccaaccaggatcttgtgtgtggagcaaatgcc
acctaccattgcaaaaaggacaactgcccaactctgcccaactctggtcaggaggacttt
gacaatgatgggcaaggagatgcctgtgataaagatgatgataacgatgaaatagtggat
gaaagggacaactgccccctgatgtataaccccaggcagtatgactatgacaaggatgat
gtcggagaccgttgtgataactgcccatatgaacataaccctgctcagaccgacactgac
aacaatggggaaggagatgcctgttctattgacatggatggagatgagattctaaacgag
cgagacaactgccctctcatttacaacacagaccagaaagacaccgatttagatggtgtc
ggagaccagtgtgataactgccccttagtccacaacccacaacagacggatgcagataat
gatctaattggagaccagtgtgatgacaaccaggacatagatgaagatggccatcaaaat
aacatggataactgcccgtacatacctaatgcaaaccaagccgaccacgacggagacggg
aaaggagatgcttgtgatcatgatgatgataatgatggcattcctgatgaccgggataac
tgcagactagtttccaacaaggaccaaatggactctgatggtgacggccgtggtgatgcc
tgtgagaatgatttcgacaatgacaaagtcccggatatcttcgatgcatgcccggaaaac
agtgcaatcagcgtcacagatttccggaagtttcaaatggttcacctcgaccccaaggga
accacacagattgatccaaactgggtggtccgaaaccagggcaaagagcttgtgcaaact
gccaactccgaccctggaattgcagtgggctttgacgagttcagcgctgtggatttcagc
gggaccttctatgtgaatacagacagggatgatgattatgcaggttttgtgtttggatac
cagtctagccgacgtttttacgtagtcatgtggaaacagatcacgcagacgtactgggaa
gacaagccatcgaaggcgtttggcatctctggcgtctctctcaaggtggtcaactccaca
acaggcactggggaaaatctacgcaatgcattatggcacacaggcaacaccaagcagcag
gtgcgcactctgtggcacgacccgaagaatatcggctggaaagactataccgcctaccgc
tggcatctcatccacaggccgaagactggattcattagagttgttgtgtatgaaggcaag
cagatcatggcagactcaggccccatttatgacaaaacgtttgcaggtggacgactcggg
ttattcgttttctcccaggaggccgtcttcttctctgacctcaaatatgaatgcagaggt
gaacaaatatga
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