Sinocyclocheilus rhinocerous: 107755569
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Entry
107755569 CDS
T04916
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
107755569
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
srx04054
]
107755569
Enzymes [BR:
srx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107755569
Pattern recognition receptors [BR:
srx04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
107755569
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
107755569
NCBI-ProteinID:
XP_016427927
UniProt:
A0A673N555
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MRFSFSKKHRHLTTTVTSAQMDCNLRPYQEEVVQAALRGENSIIWLPTGGGKTRAAVYVT
KKHLETTANAKVAVLVNKVHLVDQHFAKEFKPYLGNTYKITAISGDSNEKDLFGCLVKAS
DLVICTAQILENALINMEEEKHVELTDFTLLVIDECHHTQKESVYNKIMGRYVEKKVRKQ
GNLPQILGLTASPGTGGNRQLDKAVEHVLQICANLDSVIVSTKNFTLVLQKVVPRPKKQY
DIVEKRALDPFGDHLKAMMLMIHEFMPSTVSRSLREMGTQEYEADVVELEKAGVKKENRL
IAQCALHLRQYNDALLINDTVRMVDAFWGLDEFYNSRKTKLLDGTDLFLQGLFDENRVEL
KQLASNARYENPKLARLQCTLQEEFNDENSRAILFSKTRRGTHCLFDWVNSNPELQRVNV
KAGILTGAGTGANHMTQNEQKETIKHFRKGILNLLISTSVAEEGLDIPECNLVVRYGLLT
NEIAQQQASGRARAMNSVYSVVAEEGGREIRRELTNEYLESLTAKAIDQVQQMSPREFSR
KISELQQNAVMIRIQAERKKDEREQRYSPGQVQFQCRGCFLPVCSGEDLRKIENTHHVNI
NLEFERHYTAGVQVVLEKSFEDWEPGRVISCRNCGKEWGMEIKFRRVVIVPCLKIKSFSL
KTPGGKSTPKQWKDVEFQVKEFDFLKDMSSRFPDLDLDD
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcagcttctcaaagaaacacagacacctcaccactacagtgacatcagcacag
atggactgcaatcttagaccataccaggaggaggtggtgcaggcagcactcagaggggag
aacagcatcatctggctgcccaccggtggaggaaaaacccgtgctgcggtttacgtcact
aagaaacacctggagaccacagccaatgccaaagtggcagtgctcgtcaacaaggtgcat
ctggtagaccagcattttgcaaaagaattcaagccttatcttgggaatacatacaagata
acagccatcagtggggacagtaatgagaaagacttgtttgggtgtctagtcaaggcctca
gacctggtcatctgcacggctcagatcttggagaacgccctgatcaacatggaggaagaa
aaacacgtggagctgactgactttaccctgctggtaatagacgaatgtcaccatacacaa
aaggagagcgtctataataagataatgggccgctatgttgaaaagaaagtgagaaaacaa
gggaatcttcctcagattttgggtctcacagcatcacctggtacaggaggaaataggcaa
ctggataaagctgttgaacatgtattgcagatctgtgccaatctggattcagtaattgtg
tccaccaagaattttactctagtgctgcagaaagtcgttcctagacccaaaaagcaatat
gatattgtggaaaaaagagctctggatccatttggcgaccacttgaaggcaatgatgttg
atgattcatgagtttatgccgtcaacggtgagtcgcagcctgcgagagatgggcacccag
gaatatgaagctgatgtggtggaactagaaaaagcaggtgtaaagaaagagaacagactg
attgctcagtgtgctttgcacctgcggcaatacaacgacgctcttctcattaatgacacc
gttcgcatggtggacgcgttctggggtctagacgagttctacaattcaaggaaaaccaaa
ttgctggatggaacagatctctttctccagggactttttgatgagaaccgtgtggagctt
aaacagctggcatcgaatgcccgctacgaaaaccccaaactggcccggttgcaatgcaca
ttgcaggaagagtttaatgatgaaaactctcgcgctatcctcttctctaagacccgcagg
ggcacccattgtctgtttgactgggtgaactccaaccctgagctgcagagggtcaacgtc
aaagctggcattctcacaggagcgggtacaggtgcaaatcacatgacccagaatgaacaa
aaggaaaccataaaacattttagaaaaggaatcctcaacctcctcatctccaccagtgta
gctgaggaaggacttgatattccagaatgcaacttagttgtacgttacgggctgttgacc
aatgagatcgcgcagcagcaggccagtgggcgggctcgagctatgaacagcgtctactca
gtggtggccgaagaaggtgggcgtgaaatacgcagggaactcaccaatgagtatctagaa
agtctgactgcaaaagctattgaccaagtgcagcaaatgagtcccagggagttcagtcgc
aagatatccgagctccaacaaaacgctgttatgattcgaatccaggccgagaggaaaaag
gatgagagggagcagcgctatagtcccggtcaggttcagtttcaatgcagaggatgcttc
ttgcctgtctgcagtggagaagatttaagaaaaatagaaaatactcaccatgtcaacatc
aaccttgagtttgagaggcattatacagcaggtgtgcaggtcgttctggagaagagcttt
gaagattgggagcctggacgggttatcagctgcaggaactgtggaaaggaatggggaatg
gagattaagttcaggagggtggtaatagtcccctgcttgaaaataaagagcttttccttg
aagactcctggaggcaaatccactcccaagcagtggaaggatgttgagttccaggtgaaa
gagttcgactttcttaaggacatgagcagccgtttccctgacctagacttagacgactga
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