Sinocyclocheilus rhinocerous: 107756200
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Entry
107756200 CDS
T04916
Symbol
lrfn1
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
srx04515
]
107756200 (lrfn1)
04990 Domain-containing proteins not elsewhere classified [BR:
srx04990
]
107756200 (lrfn1)
Cell adhesion molecules [BR:
srx04515
]
Immunoglobulin superfamily
SALM family
107756200 (lrfn1)
Domain-containing proteins not elsewhere classified [BR:
srx04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
107756200 (lrfn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
Ig_3
I-set
LRR_4
fn3
Ig_2
LRR_5
ig
LRR_9
Ig_DSCAM-DSCAML_C
Sp38
C2-set_3
Motif
Other DBs
NCBI-GeneID:
107756200
NCBI-ProteinID:
XP_016428716
LinkDB
All DBs
Position
Unknown
AA seq
737 aa
AA seq
DB search
MERLVFYVLVFGALVKAQHCPGRCICQTISPTLTLLCAKTGLLFVPPTIDRKTVELRLTD
NFITAVRRKDFVNMTSLVHLTLSRNTISQIAPHAFLGLKSLRALHMDGNRLTVINSDQLQ
GLINLRHLILGNNQVHHIELSSFDEFVSTIEDLDLSYNNLRTLPWEAIARMTNINTLTLD
HNLIDHIGAGTFTLLTKLVRLDMTSNRLQTLPPDTLFQQAQVLSEPRASGSSRLTVSFGG
NPLHCNCELLWLRRLTSEDDLETCASPELLMDRYFWSIQEEEFICEPPLITKHQVTKPYV
MEGQGVTLKCKAMGDPDPTIHWRFPDGKLVHNNSRTILYDNGTLDILITTLKDSGAFNCV
ASNAAGIATAAVEVNMIPLPLFVNNSGHMREADPGLSDITTSTKSGSNDTKPQNKRVLVE
NLTANSAVIHWPSERHIPGIRMYQIQYNSTVDDTLVYRMIPSASKTFRINDLAAGREYEL
CVLAVYDDGITSLTATRVVGCVQFHTGAEAGQCRFIPSQFLGGTMIIIIGGIIVASVLVF
IIILMIRYKAYGGADAAKAKAQGDASVNVHSQTNGSRPGRSGSKQEERPESPGGKDCKAL
VLLKMEEMQEELKVELPSEKAPPLLSRRASLGDETQTDSSLTGSTMSLCLIGPGANPAEP
PRKGPLANMGLLPSELARTRHRFSFDGDYALFQSHSYPRRARTRRHKSTTQLNTDVSPPC
SRRVTFSSTEWMLESTV
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggagaggctggtgttttacgtgctggtgttcggcgcgctggtgaaggctcagcattgc
ccgggccgctgcatctgtcagaccatctcgcccacgctcacgctcctctgtgccaaaacc
ggcctgctgttcgtgccgcccaccatcgaccgcaagaccgtcgagctgcgtctgaccgac
aacttcatcacggccgtccgccgaaaagacttcgtcaacatgacgagcctggtgcacctc
actctgtcccgcaacaccatcagccagatcgcgccgcacgcgttcctcggcctgaagtct
ctgagagcgctgcacatggacgggaatcgactgacggtcatcaacagcgaccagctgcag
ggattgatcaacctcaggcacctgatcctgggcaataatcaggttcaccacatcgaactg
tcctccttcgacgagttcgtctccaccatcgaggacctggatttgtcctacaacaacctg
aggacgttaccgtgggaagccatcgccaggatgaccaacatcaacaccttaacgctggac
cacaatctgatcgaccacatcggcgccgggaccttcacgctcctcaccaagctggtgcgg
ctggacatgacgtccaaccgtctgcagacgcttccgccggacacactgttccagcaggcg
caggtgctgtccgagcccagagcgtcaggctcgtcccggctgacggtcagcttcggagga
aacccgctgcactgtaactgtgagctgctctggctgcggcgcctgacgagtgaggacgac
ctggagacctgcgcttctcctgaactcctgatggacaggtacttctggtccattcaagag
gaggagttcatctgcgagccgccgctcatcaccaaacaccaggtcaccaaaccctatgtg
atggagggtcagggcgtgactctcaagtgtaaggcgatgggcgaccccgatcctaccatt
cactggcgctttcccgacggcaaactggtgcacaataactcgcgcacgatcctgtacgac
aacggcacgctggacatcctgatcaccacgctgaaggacagcggcgccttcaactgcgtg
gcctccaacgccgccggcatcgccaccgcagccgtggaggtcaacatgatcccgctgccg
ctcttcgtcaacaactcgggtcacatgagggaggccgacccgggactctccgacatcacc
acctccaccaaatccggcagcaacgacaccaaaccgcagaacaagagggtgctggtggaa
aacctgaccgcaaactcggccgtcatccactggccgtccgaacggcacattcccgggatc
agaatgtaccagatccagtacaacagcaccgtcgacgacaccctggtgtacaggatgatt
ccgtcggccagtaagacgttcaggatcaacgatctggcggcgggtcgcgagtacgagctg
tgcgtgttggcggtgtatgatgacggcatcacgtctctgacggccacacgcgtggtgggc
tgcgttcagttccacacgggcgccgaggcgggtcagtgccgcttcatccccagccagttc
ctcggcggcaccatgatcatcatcatcggcggcatcatcgtggcctccgtcctcgtcttc
atcatcatcctcatgatccgctacaaggcttacggcggagccgacgcggccaaagccaaa
gcgcaaggagacgccagcgtaaacgtgcactcgcagaccaacgggagtcgcccgggacgc
tccggctcgaagcaggaggagcgacccgagtcgcccggcgggaaagactgcaaggcgctg
gtgctgctgaagatggaggaaatgcaggaggagctcaaagtcgagcttccgtctgagaaa
gcgccgccgttgttgtctcggagagccagtttgggcgacgaaacgcagacggacagcagc
ctgacgggctccaccatgtccctctgtctgatcggccctggggccaacccggccgagccc
cctcggaaggggccgctggccaacatggggctcctgcccagcgaactggcccggactcgg
catcgtttctccttcgacggagactatgctctattccagagccacagttacccgcgacgg
gctcgaacccgccggcacaaatccaccacccagctgaacacagacgtgtcaccaccctgc
agccggagggtgacgttcagcagcacagagtggatgttggaaagcacggtgtga
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integrated database retrieval system
