Sinocyclocheilus rhinocerous: 107756229
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Entry
107756229 CDS
T04916
Name
(RefSeq) platelet-derived growth factor D-like isoform X1
KO
K05450
platelet derived growth factor C/D
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04010
MAPK signaling pathway
srx04020
Calcium signaling pathway
srx04510
Focal adhesion
srx04518
Integrin signaling
srx04540
Gap junction
srx04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107756229
04020 Calcium signaling pathway
107756229
09133 Signaling molecules and interaction
04518 Integrin signaling
107756229
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107756229
04540 Gap junction
107756229
09142 Cell motility
04810 Regulation of actin cytoskeleton
107756229
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
srx04052
]
107756229
Cytokines and neuropeptides [BR:
srx04052
]
Cytokines
Growth factors (RTK binding)
107756229
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CUB
PDGF
AcfD_helical
Motif
Other DBs
NCBI-GeneID:
107756229
NCBI-ProteinID:
XP_016428756
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MNLFSGSADALRCGGNSGSMWRFWITHQRTVRFQIMWLLVCSLIAALSGDNYATQAQVMS
SKALRASNARSNVTDSNRLTDLYRKEEIIMVKGGGHIQSPRFPNSYPRNLLLSWKLLSPP
HTRILLEFDALFGLEEAENGVCRYDYVEVEDISETSTIIWGRWCGQRAPSRISSKTNLIK
ITFKSDDYFVAKPGFKICYSQLDSSPLASLTNWEAVTVMSDFREVSGTDTPLSAIALDND
IASVSTVEDLLRHMNPFTWQEDLEQLYTHTHYYRPRTFHTDRKHKLDLDRLYDDVKQYSC
TPRNFSVNLREELKATNAVFFPRCLLVQRCGGNCACGTDNWNSCSCSAGKIVKKLHEVLK
FSPGPSFYRKKTRAQWVLEEIHLQHHERCDCVCQFRPPR
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgttctccggatctgcggacgcgctgcgctgcggtggaaactctgggtccatg
tggcgcttctggatcacgcatcagcggacggttcggttccaaatcatgtggctgctcgtg
tgctccctcatcgcggcgctgagcggtgacaattacgccacacaggcccaggtgatgtcc
tccaaagcgctgagggcttcaaacgcacgcagcaatgtaacagacagcaatcgcctcaca
gacttgtaccggaaggaagagatcataatggtcaagggcggaggtcacatccagagcccg
cgcttccccaactcatacccccgcaacctgctgttgtcatggaaactgctctcgccgcct
cacacgcgcatcctgctggaattcgatgctctgtttggactggaggaggcggagaatgga
gtctgcaggtatgattatgtggaagtggaggatatttctgaaaccagcaccatcatctgg
ggccgctggtgtggacaaagagctccatcacggatctcatccaaaacaaacctcatcaaa
atcaccttcaaatcggatgattacttcgtagcaaaaccaggattcaaaatctgctattca
cagctggacagctcacctctcgcgtctctgaccaactgggaagcagttacagtgatgtca
gatttcagggaggtttctgggacggacacgccgctgtctgcgatcgcgctggacaacgac
atcgccagcgtcagcacggtggaggatctcctgagacacatgaaccccttcacctggcag
gaagacctggagcagctctacacacacacacactactacagaccacgaactttccacacc
gaccgcaaacacaagcttgatctcgaccgtctctatgacgacgtgaagcagtacagctgc
actccgcgcaatttctcagtcaatctccgcgaggagctgaaggcgaccaacgctgtgttt
ttcccacgatgcctcctggtgcagcgctgcgggggaaactgcgcctgcggcaccgacaac
tggaactcctgcagctgcagcgccggaaaaatcgtcaagaaactacacgaggtgctgaag
ttttctccaggtccgagtttctacaggaagaaaacacgagctcaatgggttctggaggag
attcatctgcagcatcatgagagatgtgactgtgtgtgtcagttcagaccgccacgatga
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