Sinocyclocheilus rhinocerous: 107756265
Help
Entry
107756265 CDS
T04916
Name
(RefSeq) LOW QUALITY PROTEIN: breast cancer type 2 susceptibility protein homolog
KO
K08775
breast cancer 2 susceptibility protein
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03440
Homologous recombination
srx03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107756265
03460 Fanconi anemia pathway
107756265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
srx04121
]
107756265
03036 Chromosome and associated proteins [BR:
srx03036
]
107756265
03400 DNA repair and recombination proteins [BR:
srx03400
]
107756265
Ubiquitin system [BR:
srx04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
107756265
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
107756265
DNA repair and recombination proteins [BR:
srx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
107756265
FA (Fanconi anemia) pathway
Downstream FA components
107756265
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
Tower
BRCA2_TR2
Motif
Other DBs
NCBI-GeneID:
107756265
NCBI-ProteinID:
XP_016428778
LinkDB
All DBs
Position
Unknown
AA seq
2832 aa
AA seq
DB search
MFDNFFNQIDKELGPLNPDWFEELTAKASRDEERPNSSKVEEEEEKTVKVPETSALASQL
FSTPKIFKQPHFQSPASIPNEESPYEAVNEDSSAFPWTESSPCLFGSATDGQRFDRSCEK
PGDSFGLLDTPKRSLARSAKQISESLGAQINPDLSWTSSFNTPSSLTPTVILPKTEECAP
SVSGLKDKEAIFVRKLFPSLSKGSASNATLNDTTLKQEVIAESETLLSDDLGEKPVCSPN
SSLDASGLWKQKVPSAIEDGDVLNTVQNVLDGAEDVLSIFFSNSTSTLRRIKTKERIRRR
ITDSSKYVKSVVLTSESEEILKDDVETKSPCKNKDITQWTPLSLSESTLNGDCSDTSLIN
NHNTVASSEINGCTVFSCIAESSQTFSQTVRLKSYPEGAQCQKSLLDKSPAFMLSRKSRK
FVYQVPSSDLSKTVIGHKETQPVSFDQTLKENPSVEEVSSDLNESTVASENAINNHTQPQ
DFKQLSTEIHDLDLGLDMTQLSKAFAEDFTQEIMPGALLDVAVQSDQNGQMQHKAELEEK
NEDGSHSDISNLADISVNSPNKSTVMLTTFEISHDSGCPTTFSDLDGTTTSCADIKEFFP
SFKMSNNKDISIPNKAIMKAKASLTEAAGDVLINTLNGTTPKHYQTIETLCKSVSRSTNA
NRSPIEQSIFPNHASRLCVSDAQRSDSPKSFKINISSCSSPQSNESDYKTGSKRNITVSN
VGFQTETLLKEELGRGSDSKCIHQKLDFKRSAERQTMFNINSTHKPTAVDSSREDDEDNG
TLTASQKADVTELCNLLEEANSQHEFTQFKPTNHGSDNHTTEKEWDPDILYGIDFDDSFN
CDVVKGKHPVKTDSSSVNTSDHIQIVDAAKLPCTMSKETRNGIVPLSVAEDGSLVDGIKS
IQSHFSDNTPVHFFGFKTAKGEAMSISEKSLNNARHFFEEYDQKAIYNKEVKVDIGVIKP
EHVETEPTFSTFDSMSTENKTYLQIKQDVNFSSGNVNAACKEIHKQVTENEGKEQNCLGE
KTDVFCVDSNSHFGFSTARGAKLKVPEKALLQARRLLNDVDSLEESQTQKLTIHASGNHD
ASMSTTSLKKTKAVSWSNTSIKISQPHFVTKISDGVDKLSFNSEKVFQEQKSSSDPKEVF
AKIFPSETFSPQSEEGYGFQTTSGKGFSVSAGALKKAKAIFKDCDGNIDLESAKMEEIDD
KLDVEIKQVNAFTPNCKRVTFSNVSLMEANTVLRDSDLTDDFLLLPSSVQQPPQEEVCEE
KGLQSDFSKHPYELLPPNGNCGFSTASGKKVSISAGALQSGKDLLSESVDVFSCADGSPK
TKQVVDIQTDTSSIRKHKGFSTAGGKKVAVSAAGLQTAKNLFRDCEEESLSFEDLQHQNF
KGFSDVSKKPLTKIRTAFAGCSDVSFSHEHETGNSSGKNIGFTTAGGKKMAFSATALQKA
TSIFKDCEEESLASGSLQHQVCQGFSTASGKDVTVSEKALSEVRAVFAGCDDTSFCHEPE
NSSRNNIGFSTAGGKKVAVSATGLQRAKCLFKDCEEESLASGNLQHKVCQDFSTASGKDV
TVSEKALSEVRAAFAGCDDTSFCHEPENSSRNNIGFSTAGGKKVAVSATAVQRAKSLFKD
CEEENVSSKEVPPQAKNSHESSEDMVDGNLKLEQLNKKNYGFSTASGKGVSVSKATLEEA
SKLFRDCDAQVTVTDSQLLQSDSSKFRPQHKDRQTKTTLRPLPSKATQNEPAQLDLHSLD
FNSCTDTQQKYFEQEAMACTKALLADDDLNESGSLAMTEDQKCPSVHDLQAQGSFGHKRR
KRPFDARNVADSGQPPLKRQLLSEFDRTLDTKTSGLAPLKSCPNETLRDRRVFSYNVHLK
PNVTGPDWHPVDQKSDDLKQPCSTVSVQNRRNSDPKGWVFVPPFQKGMKTETSNCQDVSK
VSTGFIPPFKKENKETTEHSNQIDQNITTSVSHSDNVAQYCDRKNLHEGSNPQPTTSVET
IPLKIMDSEEKDTEACWETLNLARDMQDMRLRKKKRQTIRPLSGSLYLAKTSGVPRIGLR
DAVGRKCPGQYTQEELNQRGVHHRVSLITSENAESFRLDCNDFFKCELMETGAVQLADGG
WLVPDNKGTVGKDEFYRALCDTPGVDPKLISDAWVFNHYRWIVWKRASMERTFPDLMGNL
CLTPEQILLQLKFRYDVEVDHSQRSALRRIMERDDTPAKTLVLCVCGVAQTCQHPEKPVK
DGKSPNAKMESCVVWLTDGWYSIKGLLDPPLSAMLNKGRLRIGNKIVTSGAELVGSQEAC
PPLEAPESLMLKILANSTRRARWDTKLGYYRDPRPISFPLSSLFTAGGVVSCVNIVVLRS
YPTQWMEKKPNGVFIFRNDRVEDREARKHSNSKHKSMDFLISKIQTQFEKEMEGNKKIRD
QRRTFSRHEVEALQDGEELYEAMERDPAVEVNTLMQTFLHIFANGXXTQSSGQXISTGAQ
EAEGGCPNRDVTPVWKLSITDAKDLQSDCVYTLNIWRPSQDLYGLLREGHRYRAYNLATS
EGKKRSGIAHIQFTATKKTLFQDVEVSPEWVHQHFRARECVRFKELQNPQFSSPCGEVDI
VGCIVSIEGKQGHCPLLHLVDENFDLVSVRTYSSLEQLAVEELVKPRALVALSNLQARPY
SGPVPSLYAGEQAVFSVNPKESHLQEAMTRLKTFVQTCEHFFSIAEEKVSDVVPSGVLGS
FQSPRTPRVQSNPKINGRVTPQQKSSIFSPFTPLNRRTPASACNSEGKDPKSLKRRRGLD
YLSRIPSPPPLTPLKNTASPCINRTFNPPRRSVTPKPPQNESPRASCPPPGEEKWVHDEE
LAMIDTQALLEG
NT seq
8499 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacaatttctttaaccaaattgacaaagagcttggacctcttaatcctgactgg
tttgaggagttgactgcaaaagcttccagagatgaagaacgtcctaacagttcaaaagtt
gaggaggaggaggagaagactgtcaaagtaccagagacatcagccctggccagtcagctg
ttttctacacccaaaatattcaagcaaccacactttcagtcccctgcttccattcctaat
gaagagtctccttatgaagcggttaatgaagactcatcagcatttccctggacagaatca
agcccttgtttgtttggttcagccacagacggtcaaaggtttgatagatcctgtgaaaaa
cctggagatagctttggccttctggatacaccaaaaaggtctttggcacgctcggcaaaa
cagatatctgagagccttggggcacaaatcaaccctgacttatcctggaccagctccttt
aacacaccatcctctttgactcccactgtgatattgcccaaaacagaggaatgcgctcca
tcagtaagtggcctcaaagacaaggaagcaatttttgtgcggaaactcttcccatctctc
tcgaaaggctctgcaagcaatgcaacattgaatgatacaacactaaaacaagaggtgata
gccgaaagtgagactcttctgtctgatgacctgggagaaaagcctgtttgctctccaaat
tcatctcttgatgcaagtggtctgtggaagcagaaggttcccagcgctatagaggatggg
gacgtcctcaacacagtgcagaatgttcttgatggtgccgaggacgtgttgtcaatattc
tttagcaacagcacttcaactctgcgaagaatcaaaaccaaagagaggatcagaaggaga
ataacagattcctcaaaatatgtcaaatcagttgttctaacttcagagtcagaagagata
ttaaaggatgatgtagaaacaaaaagcccctgcaaaaacaaagatatcactcaatggacc
cccctaagtttatcagaatccactcttaatggagactgttcggacacatctttgataaac
aatcacaacactgtagcatccagtgaaattaatggttgtactgttttcagctgcattgca
gaaagtagccaaactttttcacagactgtaagactcaagtcttatccagaaggagctcag
tgtcagaagtctttgttagacaaatcgcctgctttcatgctttctagaaagtccagaaag
tttgtgtatcaagtgccaagttcagatctgtcaaagacagtaattggacacaaagaaact
caaccagtaagtttcgaccaaacgctcaaagaaaatccctcagtggaagaggtgtctagt
gaccttaatgaatccacagtcgccagtgaaaatgcaatcaataatcatacacagccacaa
gacttcaaacagttatctacagaaatccatgatcttgatctaggattggatatgacgcag
ctttcgaaggcatttgcagaggatttcacacaagaaataatgccaggagcactgcttgac
gtggctgtacagagtgatcaaaatggccaaatgcaacataaagcagaacttgaggagaag
aacgaagatggtagtcacagtgacatctctaatttagcagacatatctgtgaactctcca
aacaagtcaacagtcatgcttacaacttttgaaatcagtcacgacagtggttgccccacc
accttttcagatttggatggtacaacaacctcgtgtgcagacatcaaagagttttttcct
tcttttaaaatgtcaaacaacaaggacatttccataccaaataaggctataatgaaggcc
aaagcatcattaactgaagctgcaggggatgttttgatcaacaccttaaatggaactact
ccaaaacattatcaaacgatagaaacattgtgcaaatcagtttcgagaagcactaatgca
aacagatcgcccatagaacaatccatcttccctaaccatgcgtcaagactgtgtgttagt
gatgctcaaaggagtgacagtccaaagagctttaaaattaatatttcaagctgttcttca
ccacagtcaaatgaatccgattataaaaccggttcaaagaggaatattacagtttcaaat
gttggctttcaaacagagactcttttgaaagaggaattggggagaggttcagactcaaag
tgcattcatcaaaaattggatttcaaaagaagtgctgaaaggcagactatgttcaacatt
aacagcacacacaaacccaccgcagtggactccagccgtgaagatgatgaggacaatggc
actttgacagcatctcaaaaggctgatgttacagaattgtgcaatcttttggaggaagca
aatagtcaacatgaatttacccagttcaaaccaacaaatcatggctcagacaaccacact
acagagaaagagtgggatcccgatatactgtacggcatcgactttgatgatagttttaac
tgtgatgttgtgaaaggaaagcatcccgtcaagacggactcttcttcagtaaacacttct
gatcatattcaaattgtagatgctgccaaattaccatgcaccatgtcaaaggaaacacga
aatggcattgtgcctttgtcagtggctgaagacggttctttagttgatggtattaagagt
atacagtctcatttcagtgataatactccagtccattttttcggttttaaaactgctaaa
ggggaagctatgagcatatcggaaaagagtttaaacaatgcaaggcacttttttgaagag
tatgatcaaaaagccatatataataaagaagtcaaggtggacatcggagtaataaagcca
gagcatgttgaaacagagcctacattcagtacttttgacagtatgagcacagaaaataaa
acctaccttcagattaaacaagatgtaaatttcagctctggaaatgtaaatgcagcgtgt
aaagagatacataagcaagtgaccgaaaatgaaggaaaagagcagaattgtttaggtgaa
aaaacagatgttttttgtgttgactccaatagtcattttggttttagtacagccagggga
gcaaagctgaaagtgcctgaaaaggctcttctgcaagcaagaagacttcttaatgatgtt
gacagcttagaagagtcgcaaacacagaaactcactatccatgcttctggaaaccatgat
gcctctatgtcaacaactagccttaagaaaacaaaagcagtttcttggagtaatacctct
ataaaaataagtcagccgcacttcgtaaccaaaatatctgatggcgtggataagctttcc
ttcaacagcgagaaggtctttcaagaacagaaatctagcagtgatcctaaagaagttttc
gcaaagatttttccctcagaaactttttcgcctcagtcagaggaaggctatggctttcag
accaccagcgggaaaggattttccgtttcagccggtgcccttaagaaggcaaaagccata
tttaaagactgtgatggaaatattgacttggaatctgcgaaaatggaggaaatcgatgac
aaactggatgttgaaatcaaacaagtaaatgcatttactccaaactgtaaacgtgtgaca
ttttcaaatgtgtcactcatggaggccaacactgttctcagagactctgacctgactgat
gacttcttattgctgccctcttcagtccagcaaccccctcaggaagaagtatgtgaggag
aaaggccttcaaagtgacttttctaagcatccttatgagttgcttcctcctaacggcaac
tgtggtttcagtactgccagtggtaagaaggtgtccatctcagctggagcactacaaagt
ggtaaggatctgttatctgagtctgttgatgttttctcatgtgctgatggatctccaaag
acaaagcaggttgttgatatccaaacggacactagctctataagaaaacacaaaggattc
tctacagcaggtgggaagaaggtggccgtctctgctgctgggctgcaaacggcaaagaat
ctcttcagagattgtgaagaagagagcttatcatttgaagatcttcagcaccaaaacttt
aaaggtttcagtgatgtctcaaaaaagccactgactaagataagaacggcatttgcaggt
tgcagtgacgtctccttcagccatgagcatgagactgggaattcttcaggaaaaaacata
ggattcactacagccggtgggaagaagatggccttctctgctactgccctgcaaaaggca
acgagtatttttaaagattgtgaagaggagagtttagcttctgggagtcttcagcaccaa
gtctgtcaaggtttcagcactgccagtggcaaagatgttaccgtctccgaaaaggcactg
agtgaggttagagcagtatttgcaggttgtgatgacacctccttttgtcatgagcctgaa
aattcttcaagaaacaacataggattctctacagcaggtgggaagaaggtggctgtctct
gctactgggctgcaaagggcaaagtgtctttttaaagattgtgaagaggagagtttagct
tctgggaatcttcagcacaaagtctgtcaagatttcagcactgccagtggcaaagatgtt
acagtctccgaaaaggcactgagtgaggttagagcagcatttgcaggttgtgatgacacc
tcattttgtcatgagcctgaaaattcttcaagaaacaacataggattctctacagcaggt
gggaagaaggtggccgtctctgctactgcagttcagagggccaagagtctttttaaagat
tgtgaagaggaaaatgtatcatctaaggaagtcccacctcaagctaagaattctcatgaa
agcagtgaggacatggtggatggaaacctaaagttggaacaactaaacaagaaaaattat
ggtttcagtactgcgagtgggaaaggtgtgtctgtatcaaaagctacccttgaggaagct
tctaaattattcagagattgtgacgcccaagttactgttactgatagccagctgctacag
agtgattcctcaaaattccgtcctcaacataaagatagacaaaccaaaaccactctgcgt
cctttgccatctaaagcaactcagaatgaacctgcacaactagacttgcactctttggat
tttaacagttgcacagacacccagcagaagtactttgagcaggaagcaatggcttgcact
aaagctttactggcagatgatgacctgaatgaatcaggcagtttggcgatgacagaggac
caaaaatgtccatctgttcatgatctacaggcacagggatcttttggccataagagaagg
aagcgtccgtttgatgccagaaatgtagcagattcaggtcagcctcctttgaaaagacaa
cttctctcagagtttgaccggacgttagatacaaagacctcaggcctcgcaccacttaaa
agctgtccaaatgaaactttaagagacaggcgtgtcttcagttacaatgtccacctcaag
ccaaatgtcactggtccagattggcatcctgtggaccaaaagtcagatgacctcaagcaa
ccatgttcaactgtatctgtccaaaatagacgtaactcagaccctaaaggatgggtgttt
gtgccccctttccaaaagggtatgaagactgagacatcaaactgtcaagatgtctctaaa
gtgtccactggttttatcccacctttcaagaaggagaacaaagaaacaactgaacatagc
aatcaaatagaccaaaatataacaacttctgtatcacatagtgacaatgttgcacaatat
tgtgataggaagaacctacatgagggttctaaccctcaaccaaccacttcagtggaaacc
atacctttgaaaatcatggactctgaagagaaagacacagaggcatgctgggagaccttg
aacctagctagggatatgcaagacatgagactcagaaagaagaaaaggcagactattcgt
ccactatctggcagcctttaccttgctaagacttctggtgtccctagaataggtctgaga
gatgctgtggggcgcaaatgtcctggtcaatacacacaggaggagctgaatcagcgtggt
gtacatcacagggtctcactaataacaagtgaaaatgctgaatcattcagattggactgt
aatgacttcttcaaatgtgagctcatggagactggtgctgtccaactggcagatggaggc
tggttggttccagacaataagggtactgtgggcaaagacgaattttatagagcactgtgt
gacacacctggtgttgatcccaaactgatcagtgatgcatgggtattcaaccattaccga
tggattgtatggaaacgggcctccatggaaagaacgtttccagatttgatgggtaatcta
tgtttgactccagagcaaatacttctgcagctaaaattcagatatgatgtggaggtggac
cacagtcagcgatccgctctcaggaggatcatggagagggacgacactccagctaagaca
ttagtgctttgtgtatgtggtgttgctcaaacgtgtcaacatccagaaaagccagtgaaa
gatggcaaatctcctaatgcaaagatggagtcttgtgtggtctggctcacagatggctgg
tattccatcaaaggcctgttagaccctccgctctctgccatgttgaacaagggccgtctc
cgaattggtaataagattgtgaccagtggagccgagttggttggttcacaagaagcctgt
cctccactggaagctcctgaatctctgatgctaaagattttagccaacagcacaagacga
gctcggtgggacactaagttgggttactatcgtgaccctcggcctatcagctttccacta
tcatcactgttcactgctggaggtgttgtgagctgtgtgaacattgtggtgttaagaagt
taccccactcagtggatggagaagaagcccaacggtgtctttatatttcgcaacgatcgt
gtagaagatcgagaggccagaaaacacagcaactccaagcacaaatccatggattttctt
atttccaaaatacagacccagtttgaaaaagaaatggaaggtaacaagaaaattcgagac
caaaggaggacatttagtcgacatgaggttgaagctctgcaggatggggaagagttgtat
gaggcaatggagcgggatcctgctgttgaggtcaacactttaatgcaaacatttttgcat
atttttgccaatgggtagtaaacacaaagtagtggtcaataaatcagcactggggcccag
gaggctgagggtgggtgtcccaatcgagatgtaactcctgtttggaagctcagcattacc
gatgccaaagacctgcagagcgactgtgtttacaccctgaatatctggcgcccatcgcag
gacttgtatggcttactcagagagggccacagatatagggcgtataatcttgccacatca
gaggggaagaaacgctcaggcattgctcacatccagttcactgccaccaagaaaacactc
ttccaggatgttgaggtgtctccagaatgggtgcatcagcattttcgtgctcgagaatgc
gtacgcttcaaagaacttcaaaaccctcaattcagttcaccttgtggggaggtggacata
gtgggatgtattgtctcaatagagggcaaacaaggccattgcccattactgcatcttgtg
gatgagaactttgacctggtctctgtgagaacctacagtagtctggagcagttagctgta
gaagagctggtaaagccgcgagcactggtcgctcttagtaatcttcaggcgaggccatac
tctggacctgtgccaagcctttatgcaggagaacaagcagtattttctgtaaaccccaaa
gaatcccatctgcaagaagctatgacccgtctgaagacttttgtccagacttgtgagcat
ttttttagcattgcggaggagaaggtctcagatgtggttccttcaggtgtcttgggttct
tttcagtctccaagaactcctcgtgtgcagtctaatccaaaaattaatggcagggtaacc
ccacagcagaagagcagcattttctcacctttcactccactgaataggagaactcctgca
tctgcatgtaacagcgagggaaaagaccccaaaagtttgaaaagaaggcgcggtttggac
tacctgtcacgtatcccatcccctccacctctcactcctctgaaaaatacagcttctccc
tgcattaacaggaccttcaatccaccacggagatctgtgactcccaaacctccacagaat
gagtcacctcgagcctcatgtcccccaccaggcgaggagaagtgggtgcatgatgaagag
ctggcgatgatagacacccaggcgttactggaaggctga
DBGET
integrated database retrieval system
