Sinocyclocheilus rhinocerous: 107756395
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Entry
107756395 CDS
T04916
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107756395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107756395
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107756395
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GTP_EFTU_D4
AAA_16
Motif
Other DBs
NCBI-GeneID:
107756395
NCBI-ProteinID:
XP_016428960
UniProt:
A0A673MYC5
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MSRHRNVRGYNYDEDFEDDDMYGQSVEDDYCISPATAAQFIYSRQDSRQARHVETLEEAE
YEEEEEEMPTSPTVASTLDPLQQGRLYSCLDQMRAVLGDSIPDSTLTQAALKYDCDPHRA
LDFILTEENTNAHTPPARTNSQPEPITTAAPQKAKAREAPESRVEAEVVPKVARMTVSGK
KQTMGFDVRSVEENGIVAPSVRRGPSPEVTAAPTTETPSKPSAVNEDSTAPTPTRPTGKS
KQQLNIHAELEKRQGGKPLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESKK
AGKASFAYAWVLDETGEERNRGVTMDVGMTKFETDSKVITLMDAPGHKDFIPNMITGAAQ
ADVAVLVVDASRGEFEAGFEAGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEI
VSKLGHFLKQAGFKDSDVFYIPTSGLSGENLTTRSEVADLTAWYTGPCLLEQIDAFKPPQ
RSVEKPFRLCVSDVFKDQGSGFCVTGKIEAGFIQTGDKVLAMPPNETCTVKGITLHDEAL
DWAAAGDHVSLTVTGMDIIKINVGCIFCDPKEPIRACTRFRARILLFNIEVPITQGFPVL
LHYQTVSEPATIRKLVSVLHKSSGEVLKKKPKCLSKGQNAVVEIQTQRPVALELYKDYKE
LGRFMLRYVGSTIAAGVVTEIKE
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcacaggaatgtccgaggttataactacgacgaagactttgaggatgatgac
atgtacgggcagtcagtggaggatgactactgcatctctcctgccactgccgcacagttt
atctactcgcgtcaagactcgaggcaggctcgacatgtagagaccctggaagaggcagaa
tatgaggaggaggaagaggagatgcccacctctcccactgttgcaagcacactagaccca
ctacagcaaggtcggttgtattcttgtttggatcagatgagagctgtgctgggagattca
attccagactccacattaactcaggcagctctgaaatatgactgtgaccctcacagagcc
cttgattttattctaactgaggagaacaccaatgcacacacccctccagccagaaccaac
tcacagcccgagcctatcaccacagctgcaccacagaaagctaaagcacgggaggctcca
gagagtcgtgttgaagcagaggttgtcccaaaggttgcgcgcatgactgtgtcaggcaag
aagcagaccatgggctttgatgtgcgaagtgtggaagaaaacggcattgttgccccatca
gttcgcagagggccgagtccagaggtcaccgctgcaccaaccacagagaccccatccaaa
ccatcggctgtgaatgaagactctactgccccaaccccgactcgaccaactggaaagagc
aaacagcagctcaacatccatgctgaactggagaagagacaaggaggaaaaccgttactc
aacctggtggtcataggtcatgtagatgctggtaagagcactctcatgggtcatctgtta
tatctgctggggaacgttaataagagaaccatgcataaatatgagcaggagtccaagaaa
gctggcaaggcctcatttgcttatgcgtgggtactggacgagacaggagaggagagaaac
agaggagtgaccatggatgtgggcatgacaaagtttgagactgactcgaaagttattact
ctgatggacgcaccaggacacaaagacttcattccgaacatgatcacaggggcggcccag
gcagatgtggctgtgttagtcgtagatgccagccgtggggagtttgaggccgggttcgag
gcaggggggcagacccgggagcacggcctgcttgttcggtctctcggagtcacacagctt
gccgtcgctgtcaacaagatggaccaggtcaactggcagcaggagaggttccaggaaatc
gtctctaagctcggtcactttctgaagcaggctggttttaaggattccgatgtgttttac
atccctaccagcggcctatccggagagaatctgaccactaggagtgaagttgcagatctt
acagcctggtacactgggccatgcctactggaacagatagatgcgtttaaaccaccccag
aggtcagtggagaagccattcaggctttgtgtctcagatgtcttcaaagatcagggctct
gggttctgtgtgacggggaagattgaggctggcttcattcagacaggagataaagttctg
gccatgcctcctaatgagacctgtactgttaaaggcatcactcttcatgatgaagcttta
gactgggcagctgctggtgatcatgtcagtctaactgtaactggcatggacatcatcaaa
ataaatgttggatgtatattctgtgatcctaaagagcccatcagagcctgtacacgattc
cgagcaagaattctactctttaatatagaagttcccatcacgcaaggcttcccggtactg
ttacattatcagaccgtaagcgaaccggccactattaggaagttagtcagtgtattacac
aagagcagtggagaagttctcaagaagaaaccaaagtgtttgagtaaaggacagaacgct
gtggtggagattcaaacacagaggcctgtggctctggagctctataaggactataaagaa
ctggggcgcttcatgctgagatatgtgggctccaccattgctgctggagttgtcacagag
atcaaagagtaa
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