Sinocyclocheilus rhinocerous: 107756516 Help Entry 107756516         CDS       T04916                                  Symbol spg11 Name (RefSeq) LOW QUALITY PROTEIN: spatacsin   KO K19026   spatacsin Organism srx  Sinocyclocheilus rhinocerous Brite KEGG Orthology (KO) [BR:srx00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:srx03400]     107756516 (spg11) DNA repair and recombination proteins [BR:srx03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      107756516 (spg11) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Spatacsin_C Motif Other DBs NCBI-GeneID:  107756516 NCBI-ProteinID:  XP_016429161 LinkDB All DBs Position Unknown AA seq 2207 aa AA seqDB search LPLLWSVLWEDQWERSGRDVKLKLKLLLLDSQCALRLYELDPQGQPLLLCERSSESLLQC VQHKHPDVTELLSLRPLWFADGCCVLLLNTCLLLQLRWTDATAQLETLSCVRLASPLQTE DACADCRLCRGTLFILLRTGLAYVFDSTDGKLLATVDFASYCSLADVSSFCLFQISQDLS TAVSVTRQNQALAVDLNHYFRKYPDHLHCRSAPNRPFLRPTESWDQDSLASSVHSLSVLD KPFQTDRSWEARLSSLYSRSKAPERPAQGLPWFRDFPHVECRRAAATAKLSQPSVKPGGA VTCFDVPDGVTAAGLNVSEFSALVTFIYPGNTNTVLAYWDLEGQSVTYHRADAPAAPVQR SAEEHLCLLLKPSGLSVVLFCVTQDELLNRLMIFGTAGTVDSLCHLNAWGRCSIPIHALQ AGLKNHQLDTVDFFLKSKENILSPASGFVLPVSTQSHLRNVQALCPALDLLCSAIHDTHT EAQSQQFCDQLLSITLTFLNTQTKVLLTSTHELDVNLQECVQILDGYISDLRRYMKKFPW PHASVSLSAAVSITDTHQDWPSLSDEEVVQHAILSRRIPHAQAFLRRRGCVECSLEDIRK TGLRRTFTCLTHRDLQQAKTLLTHMGFNVKEQLHSICVFTADRDLRAFMVEELQKQNYLS CEELQQVEFIQTINNLCSTPTTRCSNRLDTSRVLQISRSDPESRRLLQEITQEPDSSSCS SLLDPVRLDWVRYWDRDTQSSILLSRLQPPAQGSWDAAVLWSYLTSLHDGVRASAWVCSS IATDVPRWPALEPHVINHSSRCGQYLRDQILDLLARQDLFVQSEMEDFQQLLWRLGQAGG VMHHGNDPPVPQEFHQRFVLHCLENSLQYLLYCYLEHYRLTPGNCPLLTDRNLFESFPWF EMMLKLQKITRDLKEPERVFGASLTAAQVLLPGSQASISSMLLEGHSLLALSTIMFRPGG MDQAVREGERGQDPLSRVDPQLLRMALSAYPKLRAALFPQSGPRCDVSLYHLLQALHPLD PSRLFGWQSANATGGSEASSEPPHFSSSQLVSKLAVVESLDFLYYLSHGRPAFAYGVFLT QHLLDCSNVKLQXVQLTVTLSKXHTNTCLLRHLTAQTTNHAVMTVSYFSLNSLNQLWTQT CEDHRDAASLQQELVEKAGKLVNGEKRSAQELLVHLETAVRDALEKKAVCRSSYEAALEW ALPVQFCHLHALPLSPAFPQDCARDGQWLNFLLFVQLHNYPLQQVRSLAASFSPALQSHI SLAFQDLHPTSSHQAVEDQGSVARTLPRDESPEPPRELFQVLLESQEKPSPWRFLLSEAV RQRSPALSVLAGCHQAAELLQCLCVWILASVGDDVTQEATAHIQESPAHHVWNLHDLSVL WKTLLCRSKIRPLIRGFQLFQRESPLIYMLASVVLSSDVLPVQWVESQASALLLTLLKQS RTQYELRRLLQLLVDMERLLKSNGPDFRKLSQLSQVLSDTPVPLSAHLLDQYSSAGLQDE CRTIMQQLQDLGLFTQARTVAQLAELPIDCLIIKELLRDLCAHQQKRQWERQETRLAFWR RCHEQLKTDRVQPEAASQFFLTQAEEPLGSGSELVHLQERCLLLGLAGHWLSLHDPPLPV WRLAALEERQWQSRIRWLLLHTALERQSLFAPSALSHDSFQSLLQEFSFSRTAALDEPAH LSVAGLPAAEDDCLLSADERKALAALVAQLLDEGGVSEASRVCRYFRLFHRDVWLVLKCR GLASGELQPELHSPDGETRRSLPSWYRELQCSFAEISSEEPEAVLRKVLLSQQVDRYKRA QAFISVQGLQPDAVARLVSTAVLEGLLASAQEGETGERLMYGPADGRDTFLQLAKLCGDP NLVGTKLMDSIPTVPRSELSCTVEILILAHDCFSLTCNMEGIVRVLQAARHLSHTHLAHG DGYGLLVRLLTGIGRYNEMTYVFDLLHQNHRFEMLLRKKVESNSEFILNSLLDYIKRCLP GDSEKHNMVALCFSMRREIGENHEAAARTQLKIIESQPWAITADLKNALVKVLTLLKDAA ESYSKDSCVRLAVKCVKLAKLVTLQLHFVNQGQEQRVINLRPADLQSTIVSLPRCYQAFV LAEAYDYSPDWAELLYQKVLLRADFSYLEEFKRHRALSAGLFEDISKKMSHHKTPASCSQ NLKKLLSHCEDVYTHYKLAYEHKFLDVANMLLQDSKTNSFLKDRLGT NT seq 6624 nt NT seq  +upstreamnt  +downstreamnt ttgcctttgctgtggagtgttctgtgggaggatcagtgggagcgcagcggtcgggatgtg aagctgaagctgaagctgctgctgctggactctcagtgtgcgctgaggctgtatgagctg gatcctcagggtcagccgcttcttctgtgtgagagatcgtctgaatccctgctgcagtgc gttcaacacaagcaccccgacgtgacggagctgctgtcgctgaggccgctgtggttcgct gacggctgctgtgtgctgctgctgaacacatgtctgctgctgcagctccgctggacggac gcgactgcgcagctggagacactgtcctgcgttcggctcgcttcacctctccagacggag gacgcctgcgccgactgccggctctgtcggggaacgctcttcattctgctccggactgga ctcgcatatgtgtttgacagcactgatgggaaactcttggctacagtggatttcgcctca tactgcagtctagcagacgtctcatccttctgtctcttccagatctcacaggatctcagt acagctgtgagcgtcacccggcagaaccaagccctcgccgtcgacctcaaccactacttc aggaagtatccagatcaccttcactgtcgttcagcccctaatcggccatttctcaggccc actgaatcatgggatcaggacagtctcgcgagctccgtccacagcctgtcggtcctggat aaacctttccaaacagacaggtcgtgggaggcgcgtctgtcttcgctgtacagtcgatct aaagctccggagcgcccggctcaggggttaccctggttcagagatttccctcatgtggag tgccgtcgggcggccgccaccgccaaactctcgcagccctccgtgaagccagggggcgct gtgacgtgtttcgacgtgccggacggagtgaccgcagcaggcctgaacgtctcggagttc tctgcgctcgttacgttcatttatcctggaaacaccaacacggttctggcttactgggac ctggagggtcaaagcgtgacgtaccaccgcgcagacgcccccgccgcccccgtccagaga tcagccgaggagcacctgtgtctgctactgaagccgtcgggtctgtccgtggttttgttc tgtgtgacgcaggacgagctgttgaaccggctgatgatttttggcacggccgggacggtc gactcgctctgccatctgaacgcctggggacgctgttcaatacccatacatgccctacag gccggcctgaagaaccaccagctggatacggttgatttctttctgaagagtaaggagaac atcctgagccccgcgtctgggtttgttctgcccgtctcgacccaaagccatctgaggaat gtgcaggctctgtgtccggctctggatctgctgtgctctgctattcacgacacacacact gaagctcagagccaacagttctgcgatcagctgctgagcatcacgctcaccttcctcaac acgcaaaccaaagtcctcctcaccagcacacacgagctggacgtgaacctgcaggagtgt gtgcagattttagacggctacatctctgacctgcggcgatacatgaagaagttcccctgg ccgcatgcctccgtgagtctgagcgctgctgtgtccatcaccgacacgcaccaggactgg ccgtcgctgtctgatgaggaagttgttcagcacgctatattgagcagacggatcccacat gcgcaggctttcctgcgcagacgcggctgtgttgaatgcagtctggaggacatcaggaag acaggactgagacgcaccttcacctgtctcactcacagagacctgcagcaggccaaaaca ctgctgactcacatgggcttcaatgtgaaggagcagctccacagcatctgcgttttcacc gccgatcgggatctaagggccttcatggtggaggagctgcagaagcagaattacctctcg tgtgaagagctacagcaggtggagtttattcagaccattaataacttgtgctcgacacct acgacgagatgctcgaaccgtctggacaccagcagggttcttcagataagccggtctgat cccgagagcaggcgtctgctgcaggagatcacgcaggaaccggactcgtcctcctgcagc tctctgctggatcctgtgcgtctggactgggtcagatactgggacagagacacgcagagc tccatccttctgtcccgactgcagccgcctgctcagggttcgtgggatgccgctgttctg tggtcgtatctcacctctctgcatgatggtgtccgagcctcggcgtgggtttgcagctcg atcgcgactgacgtcccccgctggcctgcgctcgagccgcacgtcatcaaccacagcagc cgctgcggacagtacctgcgtgatcagatcctggacctgctcgcccgacaggacctgttt gtgcagtcggagatggaggacttccagcagttgctatggcgactgggtcaagccggagga gtgatgcatcatgggaatgatcctcctgtcccacaggagtttcaccagcgcttcgtcctg cactgtctggagaacagcctgcagtacctgctctactgctacctggagcactacaggtta actcccgggaattgcccgcttctgaccgacagaaacctgtttgagagtttcccctggttt gagatgatgctgaaattacagaaaatcaccagagaccttaaagagccggagcgggtgttc ggggccagtctgacggcggcgcaggttctgctgcccgggagtcaagccagcatcagcagc atgctactggagggtcacagtctgctcgccctgtccaccatcatgttcagaccgggcggc atggaccaggccgtgcgcgagggcgagcgcggtcaggacccgctgagcagagtcgacccg cagctgctgcgaatggccctcagtgcgtatcccaaactcagagcggccctgttccctcag agcggcccgcgctgcgacgtttccctctaccacctcctgcaggctttgcatccgctggat ccctccagactgttcggatggcagtcggccaacgccacgggcggcagcgaagcgtccagc gagccgccgcacttctccagctctcagctcgtcagtaagttggccgtcgtcgagagtctg gacttcctatattacctgagtcacggccggccggcgttcgcatacggggttttcctcacg cagcatctcctcgactgcagcaacgtcaagcttcagtgagtccagctcactgttacactg tcaaaataacacacaaacacgtgcttactgcgacatctgacagctcaaactacaaatcat gctgttatgacagtcagctacttcagtttaaattctttgaatcaactctggactcagacc tgcgaggaccaccgagacgccgcttcactgcagcaggagctcgtggaaaaggccgggaag ctggtcaacggtgagaaaagaagcgctcaggagctgctggttcatctggagacggcagtc agagacgctctggagaagaaagccgtctgtcgatcgtcgtacgaggcggcgctggagtgg gcacttcctgtccagttctgtcacctgcacgctcttcctctaagccccgccttcccacag gactgtgctcgtgacggacagtggctcaacttcctgttgtttgtacagctgcacaattac ccgctacaacaggtcagatctctggcagccagtttcagtccggctctgcagtcgcacatt tctctggctttccaagatcttcatccgaccagctcccatcaggctgtggaggatcaaggg agcgtcgctcgcactcttccccgagacgagagccccgaaccccccagagagctgttccag gtgctgctggagagccaggagaagcccagtccctggaggttcctgctgtccgaagcggtc cgtcagcgcagtcctgctctgtccgtgctggcaggctgccatcaggccgccgagctgctg cagtgtctctgcgtgtggatcctggcatctgtcggtgatgatgtcactcaggaagccacc gcccacatccaggagagccccgcccatcacgtgtggaacctccacgatctctccgtcttg tggaagacgctgctgtgcaggagcaagatcaggcctctgattcgtggattccagctgttt cagagggagtctccgctgatttacatgctggcaagtgtggtgttgagttcagacgtgctg ccggtccagtgggtcgagtctcaggcttcggctctgctgctgacgctcctcaagcagagc aggactcagtacgagctgcgccggctgcttcagctgctggtggacatggagcgactgctc aaatccaacgggcctgacttcaggaagctgagtcagctgagtcaggtgctgtcggacact cctgtgccgctgtctgcgcatctgctggaccagtactccagcgccggcctgcaggacgag tgcaggaccatcatgcagcagctgcaggacctcggcctcttcacgcaggccaggaccgtc gcgcagctggccgagctgcccatcgactgcctgatcataaaggagctgctgcgagatctg tgcgctcatcagcagaagcgtcagtgggagaggcaggagacgcggctggccttctggagg agatgccacgagcagctcaagacggatcgcgtccagcccgaggcggcctctcagttcttc ctgactcaggctgaggagccgctggggtcgggttcggagctggttcatctgcaggagcgc tgtctgctgttgggtctggcgggtcactggctgtccctgcatgatcctccgctccccgtc tggcgtctcgccgcgctggaggagcgtcagtggcagagtcgcatccgctggctgctgctt cacacggctctggagcgccagagtctgttcgcgccctcggccctctcccacgactccttc cagagcctcctccaggagttctccttctccaggacggcagctctggacgagccggctcat ctgagtgtggccgggctcccggcggccgaggacgactgcctgctgtctgcagacgagcgc aaggctctggccgctctggtggcgcagctgctggacgagggcggcgtgagcgaggccagt cgcgtctgcaggtatttccgtttgtttcacagagacgtgtggctggtcctgaagtgtcgc ggtctggcgagcggagagctgcagcctgagcttcacagccctgatggagaaaccagacgc agtttgccatcatggtatcgagagctgcagtgctcgttcgctgagatctcttcggaggag cccgaggctgttctgaggaaggtcctgctctcgcagcaggtcgaccgctataagcgcgct caggccttcatcagtgtgcagggcctgcagcccgacgccgtcgcccggctcgtctccacc gctgtgctggagggtttgctcgcctcggctcaggagggagaaaccggagagcggctgatg tacggcccagccgacgggagagacacgttcctccagctggccaaactgtgtggagaccca aacctggtcggcaccaaactgatggacagcatcccgaccgtcccgcggtcagagctcagc tgcactgtggagatcttgattttggctcatgactgcttcagtctcacctgtaacatggag ggaatcgtgagggtcctgcaggcagccagacacctgagtcacacacacctggctcacggc gacggctacggactcctggtgcgtctcctcacaggtatcggcaggtacaatgaaatgacg tacgtctttgacctgctccatcagaaccatcgcttcgagatgctgctgaggaagaaggtc gagtcgaattctgagtttatattaaattctctgttggactacatcaagcgttgtctgccg ggtgacagcgagaagcacaacatggtggctctgtgtttcagcatgcgccgagagatcgga gaaaaccacgaggcagcggcgcgaacgcagctcaaaatcatcgaatcacagccctgggcg atcactgcagatctgaagaacgctcttgtgaaggtcctgactttactgaaagacgcagct gagagctactcgaaggactcttgtgtgcgtctggctgtgaaatgtgtcaaactggccaaa ctggtgactctccagctgcacttcgtgaatcagggacaggagcagcgcgtcatcaacctg cggccggcagacctccagagcaccatcgtgtctttaccgcgctgttaccaggcgtttgtg ttggccgaagcgtacgactacagtccggactgggccgagctcctctatcagaaggtgctt ctcagagcagacttcagctatctggaggagttcaagcggcacagagcgctgagtgccggc ctgttcgaagacatctccaagaaaatgtctcatcacaaaacgccggcgagctgcagtcag aatctgaagaagctcctgtctcactgcgaggacgtttacacgcattataaactagcttac gagcacaagttcctggacgtggccaacatgctgctgcaggactccaagaccaacagcttc ctgaaggaccggctgggcacctga

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