Sinocyclocheilus rhinocerous: 107756807
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Entry
107756807 CDS
T04916
Name
(RefSeq) collagen alpha-1(XXIII) chain-like isoform X1
KO
K24355
collagen type XXIII alpha
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
srx00536
]
107756807
Glycosaminoglycan binding proteins [BR:
srx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107756807
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
107756807
NCBI-ProteinID:
XP_016429575
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MPKMVSTGDSKDASKTSQSNGHYTLQIFHCLTTLVCFMLSASSVAVCLLMNVKTSYLERK
IEVLEMERLSVIQPVHTTLDAHATFRDAIEKLVQERLKEGVSKIRTAREAAQECSCPPGP
PGKRGRKGNPGIPGPPGRDGYPGPMGMDGKPGPPGPNGSQGMPGPKGDKGDQGDMGPRGP
PAYATSAGLLSNQILTVKGDQGQAGPPGPPGTPGPRGPPGNTGRDGPQSHPGEPGPPGKD
GYEGPRGPPGIEGMNGVNGMPGPQGPVGDKGDKGAPGTEGKRGTDGSPGMKGEKGDGGDP
GPQGEKGATGFIENADLDVRLKALQGPPGPPGEQGPKGEMGLAGAPGPEGKQGHKGERGD
AGEPGATGAKGEKGEIGLIGPSGEAGQKGDKGDSRLEDNLAQIIPLPGPPGPPGPAGYHG
LPGPKGEPGEAVKGEKGDAGEKGPPGQRGLQGFPGSNGLVGLPGAKGEKGKQGEPGLDGF
PGLQGEKGDRGDKGEKGDRGSIGKKGLKGQKGEQGPPGLDQPCPVGRDGLPIPGCWHK
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaatggtttcaaccggggattcaaaagatgcgtcaaagacatcacagagcaat
ggacattacacattacagatatttcattgtttaacgaccctcgtatgctttatgttgtcg
gcgtcttcggtggcagtttgtctgcttatgaacgtcaaaacatcttatcttgagcgtaaa
attgaggttctagagatggagcgactgtctgtgattcaacctgtgcacacgacactggat
gcgcacgcgacttttcgggatgcgatagagaaacttgtgcaagagagactaaaagaggga
gtgtcgaaaattcgcaccgctcgagaagcagcgcaagagtgctcgtgtcctccaggtcct
ccaggaaaacgtggaagaaaaggcaaccctggaattccaggccctccaggacgagatggc
tacccgggtccaatgggtatggatggtaagcctggacctccaggtccaaacggcagtcag
ggaatgccgggaccaaaaggagataagggtgaccagggagacatgggtcccaggggacca
ccggcctacgctacctctgcaggcctgctcagtaatcagattctcacggttaagggtgat
caaggtcaggctgggcccccaggacctccaggaacacctggtcccagagggcctccagga
aacacaggcagagatgggccgcagagccacccaggagagccgggtcctcctggaaaagat
ggatatgagggaccaagagggccacctggcatagagggtatgaatggtgtcaatggcatg
cctggcccacagggccctgtaggggacaagggggataagggtgcaccaggtactgaaggg
aagagagggactgatggatcccctggcatgaagggtgaaaagggggatggtggagatcca
ggaccccagggagagaaaggagctactggcttcatagaaaatgctgatctggatgttaga
ctcaaagctctacaggggcctccaggacctccaggagagcaagggccaaaaggagaaatg
ggcttagctggggcaccaggacctgaaggaaagcagggccataagggagagagaggtgat
gcaggagagcctggagcaacaggagcaaaaggggaaaagggggaaattggactgataggg
ccttcaggtgaagcagggcaaaagggagataaaggagactctaggcttgaggacaatctg
gcccagattatccctttgcctggcccgccagggccacctggacctgccggatatcatgga
ttgcctggacccaagggagagcctggtgaggcagttaaaggagaaaagggcgatgctgga
gagaaaggtccacctgggcaacggggtcttcaaggctttccagggtctaatggcttggta
ggcctgccaggtgcaaaaggtgaaaaggggaaacaaggtgaaccaggtttagatggtttc
ccagggcttcaaggagaaaagggggacagaggagacaagggggagaagggtgacagaggt
tcaataggaaaaaaaggtctgaaaggacagaagggagagcagggacctccagggcttgat
cagccttgtcctgtggggcgtgatgggctgcccataccaggatgctggcataagtaa
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