Sinocyclocheilus rhinocerous: 107756835
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Entry
107756835 CDS
T04916
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107756835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107756835
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107756835
mRNA degradation factors
5'-3' decay
Lsm complex
107756835
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
107756835
NCBI-ProteinID:
XP_016429616
UniProt:
A0A673MGE7
LinkDB
All DBs
Position
Unknown
AA seq
133 aa
AA seq
DB search
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGILRSIDQFANLVLHQTVERIHVGKKFGDIP
RGIFVVRGENVVLLGEVDLDKECDQVLQRVSIEEILEEQRTEQQAKQESERLKLQAVKER
GLSIPKADTLDDF
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaattacatgccagggactgcgagtctcatcgaggacattgataagaaacaccttgtt
ctgcttcgcgacggaagaacattgattgggatccttagaagcatagatcagtttgctaat
ttagttttgcatcaaactgttgaacgtattcacgttggtaagaagtttggtgacatacct
cgtgggatatttgttgtcagaggagaaaatgtggtcttgcttggagaagtagatctggat
aaagagtgtgatcaggtcctccagagagtttccattgaggagatcctggaggaacagcgg
acagaacagcaagccaagcaagagtcggagagactgaagctacaggcggtgaaagagcga
ggcttatccatccctaaagctgacacgttagatgatttctga
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