Sinocyclocheilus rhinocerous: 107756919
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Entry
107756919 CDS
T04916
Name
(RefSeq) bifunctional endoribonuclease and deubiquitinase ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107756919
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
107756919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
RuvA_C
zf-CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
107756919
NCBI-ProteinID:
XP_016429734
UniProt:
A0A673MWZ7
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MQSRCYHQPAGLGQDGPDLHDLQMKVDFFRKLGYSPQEVKAALRKLGLGTDTNAVLGELV
RSGAKAVPSSSSDSDDSGFSLPHRGGSSSRAQGSTLEDTTEPESDLKPIVIDGSNVAMSH
GNKEVFSCRGIELAVNYFLDRGHRNITVFVPSWRKEQPRPDVPISDQHILEELERKKILV
FTPSRRVGGKRVVCYDDRFIVKLAHDLDGIIVSNDTYRDLQSERPEWKRCIEERLLMYSF
VNDKFMPPDDPLGRHGPNLDNFLRKKAMLLDHKRQLCPYGKKCTYGIKCKFYHPERTNQS
QRSLADELRENARLSGSKEESRVTGPLRGMYPSFGSSSPSLEQELEQKLNLDPNSSDSRD
VMLQYWDDILSTKKPLNTATVAQRSASVDRTSLQAPYPTNPSSIFSSDSGLGSYQSQFSD
PSQSIDELHRMRSNHPPMSGNPGVPAGGQRYYDNMSSFSNYQPNFGAYSSLPLPNPVQRY
SLSAYGAWPYPYFLPQATSLPEPLPCPSSHRSPDVYGSQQHSAMPQSNAFQEEREEVRKK
LHAIFNPHHVNKVMEMFPQLKDAQQLAAEILKLKSRGEFF
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgaggtgttaccatcaacccgctggcctgggccaagacggacctgacctccat
gacctgcagatgaaggtcgacttctttcgtaagctgggatactctccacaagaggtgaag
gctgccctgaggaagctcggcctggggacagacaccaacgcagtgctgggggagctggtg
cgttcaggggccaaggctgtgccctcctctagctctgacagcgatgatagtgggttcagt
ttgccccatcggggaggaagctcatctagggcacagggctcaacgctggaggacaccact
gaaccagaaagtgacctgaagcctattgttattgatggcagcaacgtggccatgagtcat
gggaacaaggaagtgttttcttgccgtgggattgagctggcagttaattacttccttgac
cgaggacacagaaatatcactgtgttcgtgccttcctggagaaaagagcagcccaggcct
gatgtacctatttcagatcagcatattttggaagagctggaaaggaagaagattcttgtg
tttacaccttcacgaagggtcggaggaaagcgtgtagtttgctatgatgatcgttttatt
gtcaaattagctcatgatctggatggcattatagtatccaacgacacatatcgtgacctg
caaagtgaacgtccggagtggaagcgttgtattgaggagagattgcttatgtactcgttt
gttaacgacaagttcatgccacctgatgaccctctcggccgtcatggacccaatttagat
aattttcttcgtaaaaaagctatgttgcttgaccacaagcgacaactctgtccatatgga
aaaaagtgcacatatgggatcaagtgtaagttctaccacccagagcgcacaaaccagtca
cagcgttctctagccgatgagcttcgagagaatgccagactgtctggttcaaaagaggaa
agcagagtaactgggccactaagaggcatgtacccaagttttgggtccagctcaccctcc
ttggagcaagaactggaacaaaagctcaacttggatcccaacagctctgacagcagggat
gttatgctccagtactgggatgacattttgtccaccaaaaagcccttaaatacagccaca
gtagcacaacgcagtgcttcagtagaccgaaccagtctgcaagcaccttacccaacaaac
ccttcgtccattttcagttctgactcagggcttggatcctaccaaagccaattttcagat
ccatcccagagcattgatgagttgcataggatgagatccaatcatccaccgatgtctggt
aaccctggtgtacctgcaggtggccagcgctactatgacaacatgagttctttctccaac
tatcagcccaactttggtgcctacagctccctacctctacccaaccccgtccagcgttac
agtctttctgcttacggtgcctggccttacccttacttcttaccacaggcaaccagttta
cccgaacctttaccctgtcctagctcgcacaggtctcctgatgtctacggaagccagcag
cactcagccatgccacagtccaacgctttccaggaagaaagagaggaggtcaggaagaag
cttcatgcgatttttaacccgcatcatgtaaacaaagttatggaaatgttcccgcagctg
aaagatgcgcagcagctggcggcagagattctcaaactcaagtccagaggagagttcttc
tga
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