Sinocyclocheilus rhinocerous: 107756948
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Entry
107756948 CDS
T04916
Name
(RefSeq) pre-mRNA-processing-splicing factor 8-like isoform X1
KO
K12856
pre-mRNA-processing factor 8
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107756948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
srx03041
]
107756948
Spliceosome [BR:
srx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
107756948
Complex C
U5 SnRNP specific factors
107756948
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
107756948
NCBI-ProteinID:
XP_016429765
LinkDB
All DBs
Position
Unknown
AA seq
2342 aa
AA seq
DB search
MAAAFPYRGVPGTMPPGVPPPPPAVAPVPDYMTEEKLQEKARKWQQLQAKRYSEKRKFGF
VDAQKEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQI
RDVPVLYHITGAISFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEE
PPLDYADNILDVEPLEAIQMELDPEEDSSVAEWLYEHQPLKDTTKYVNGTTYRRWQFTLP
MMSTLYRLANQLLTDLVDGNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDW
NEFNDINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFD
PLINPISHRHSVKSQEPLPDDDEEFELPEYVEPLLKETPLYTDNTANGIALLWAPRPFNL
RSGRTRRAIDVPLIKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLF
RSFKATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTK
ERKKSRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYR
YKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWASGWRVWLFFMRGITPLLERWLG
NLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHL
SESWRCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCK
KNLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYK
HDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKE
VGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVY
KWCQGINNLQDVWETAEGECNVMLESRYEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKN
NVVINYKDMNHTNSYGIIRGLQFASFIVHYYGLVMDLLVLGLHRASEMAGPPQMPNDFLS
FQDTVTESAHPIRLYCRYIDRIHIFFRFSADEARDLIQRYLTEHPDPNNENIVGYNNKKC
WPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTIQWENSFVSVYSKDNPNLLFNMCGFE
CRILPKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGS
TTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPP
VVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQ
PWESEFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYD
KGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGT
YFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQV
QLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQELDALEIETVQKET
IHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDS
HDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGGKPLIQQAMAKI
MKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKT
FEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLP
VEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQ
MVLFNLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTD
EEWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQT
KEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVS
SDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNPQVKEIRCIVMVPQWGT
HQTVHLPNQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTII
ITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMV
PGQVSWNYNFMGVRHDPNMKYDLQLANPKEFYHEVHRPSHFLNFASLQEGELYNADREDM
YA
NT seq
7029 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgcattcccctacagaggtgttcctggaacaatgcctccaggtgttcctcca
cctcctcctgctgttgctccagtaccagattacatgactgaggagaaactgcaagagaaa
gctcggaaatggcagcagcttcaggccaaacgctactcagagaagaggaaatttggcttt
gtggatgctcagaaagaggacatgccacctgagcatgtgcgcaaaatcatcagggatcat
ggtgacatgacaaacaggaaatttcgtcatgacaagagggtctaccttggggccctgaaa
tatatgccccatgcagtgctcaaactgctggagaacatgcccatgccctgggagcaaatc
agagatgttcctgtgctctaccacatcacaggcgccatttcctttgtaaacgaaatccca
tgggtgattgagccggtgtacattgctcagtggggcacgatgtggatcatgatgcgtcgt
gagaagcgagacaggcggcacttcaagcgcatgcgtttccccccatttgatgatgaagag
cctccgttggattatgcggacaacatcctggatgttgagcctcttgaagcgatccagatg
gagctggaccctgaggaggactcctctgttgcagaatggctttatgagcatcaacctctg
aaagataccacaaaatatgtgaatgggaccacatacagacgctggcagttcacattacca
atgatgtccactctgtatcgattggctaatcagttgctgacagacttggtggatggaaac
tacttctacttgtttgacttgaaggctttcttcacctctaaagcgttgaacatggccatt
ccggggggacccaaatttgagccacttgtcagagacattaacctccaggatgaagactgg
aatgagttcaatgacatcaacaagatcatcatcagacaaccaatcaggacagaatacaaa
attgcattcccttacttgtacaacaacctgccacatcatgtgcacctcacctggtaccac
acaccaaacgtggtgttcatcaagactgaggatcctgatttgcccgccttctactttgac
cctctgatcaaccccatctcccataggcactctgtcaagagccaagagccactgccagat
gatgatgaggagtttgaactgcctgagtatgtagagccattactgaaagagacgcctctc
tacactgacaacacagctaatggaattgcgctgttgtgggcgcctcgtccatttaatctc
cgctctggaagaaccagacgggccatcgatgtgcctctcatcaaaaactggtatcgtgag
cactgtcctgcaggccagcctgtgaaggtgcgtgtgtcttaccagaagctcctgaagtac
tacgtgctgaatgcgctaaaacacagaccacctaaggcacagaaaaagagatacctgttc
cgctctttcaaagccaccaaattcttccagtccacaaagctggattgggtagaagtcggt
ctccaggtgtgccggcagggctacaacatgctgaacctgctgattcacagaaagaacctc
aactaccttcacttggactacaacttcaacttgaagcctgtgaaaaccctcaccacaaag
gaacgtaagaagtccagattcgggaacgcgttccacttgtgccgtgaggttctgcgtttg
agcaagcttgtggtggacagtcatgtgcagtacaggcttggaaatgttgacgctttccag
ctggcagatggactgcagtacatcttcgcccatgtcggtcaattgactggcatgtaccgc
tacaagtacaagctcatgaggcagattagaatgtgcaaagacctgaagcatctcatctac
taccgcttcaacacaggtccagttggaaaaggtccgggctgtgggttctgggcttcagga
tggagagtctggctgttcttcatgagaggcatcacacctcttctggagcggtggcttggg
aatcttctggccaggcagtttgagggtcgacactccaagggtgttgcaaagactgtgacc
aaacagcgtgtggaatctcatttcgatctggagcttagagctgctgtgatgcatgacatc
ctggatatgatgcctgagggtatcaagcagaacaaggccagaaccatcttgcagcatctc
agtgagtcatggagatgctggaaggccaacatcccttggaaggttcctgggcttccaaca
cccattgagaacatgattctccgctacgtgaaggccaaagctgactggtggaccaacaca
gcccactataaccgtgaaagaatcagaagaggagccactgtggataagactgtgtgcaag
aagaacctgggacgtctcactcgactctatctaaaggcggagcaggagagacagcacaat
tacctgaaggatggaccttacatcacagctgaggaggccgtggccatctacaccaccaca
gtgcactggctggagagtcgtcgtttctctccgatccccttccctcctctctcttacaaa
catgacactaagctgctcatcctggctttggagagactcaaggaggcttacagtgtgaag
tcaaggctgaaccagtcacagcgtgaggagttaggtctgattgagcaggcctatgacaac
cctcatgaggctctgtcaagaatcaaacgtcacctcctcactcagagagccttcaaagag
gtgggcattgaattcatggacctttacagtcacttggtgccggtttatgatgttgaaccc
ctggaaaagatcactgatgcatacctggatcagtacctctggtatgaggcagacaagcgc
agactttttccaccctggatcaaaccagctgacacagagccacctccactgctggtgtac
aaatggtgccaaggaatcaacaacctgcaggatgtgtgggagacggcagagggcgaatgc
aacgtcatgctggagtctcgctatgagaagatgtacgaaaagattgacttgacgctgctg
aacaggcttctgcgtctcattgttgatcacaacattgccgattacatgacggccaaaaac
aacgttgtcattaattataaggacatgaaccacacaaactcgtacggtatcatccgcggc
ctgcagtttgcctctttcatcgtgcattactatggtttggtgatggacctgctggtgctg
ggtctacacagagccagtgagatggctggacctcctcagatgcccaatgactttctcagc
ttccaggacacggtcactgagagtgcccatcctatacgcctttactgcagatacatagac
cgcattcacatcttcttcaggttctctgctgatgaggcgagagatctgatccagaggtac
ttgaccgaacacccagaccccaacaatgagaacattgtgggctacaacaataagaaatgc
tggccaagagatgctaggatgagactgatgaaacatgatgtgaacttgggccgtgctgtg
ttctgggacatcaagaatcgcctgcctcgttctgtgaccacaattcagtgggagaacagc
tttgtgtctgtgtacagcaaggacaaccccaacttactcttcaacatgtgtggctttgag
tgtcgcatcctccccaagtgccgcactagttatgaggagtttacgcacaaagatggtgtg
tggaatttgcagaatgaggtaacaaaggaaaggaccgcacagtgtttcctgcgtgtagat
gatgagtcaatgcagaggttccacaacagagtgcgacagattctgatggcttctgggtcc
accaccttcacgaagattgtgaacaagtggaacactgctctgattggtctgatgacatac
ttccgtgaagccgtggtcaacacccaagagcttttggacctgctggtgaagtgtgagaat
aagatccaaacccgtatcaagattgggttgaactccaaaatgcctagtcgtttccctcct
gtggtgttttacacccctaaggagttgggtggactgggaatgctttccatgggacacgta
ctgattccacagtctgaccttaggtggtccaaacagactgatgtgggcatcactcatttc
cgttccggtatgagtcatgaggaggatcagctgattcctaatctgtaccgctacatccag
ccatgggagagcgagttcattgactcccagagggtttgggccgaatacgccctcaaacga
caggaggccattgctcagaacagacgtttgacactggaggatctggaggactcctgggac
agaggtattccacgtattaacacactcttccagaaggacagacacactctggcttatgac
aagggttggagagtcagaacagacttcaagcagtaccaggtgttgaagcaaaatccattc
tggtggactcaccaaaggcatgatgggaaattgtggaatttaaacaactaccgtaccgac
atgatccaggctcttggaggagtggaaggcattcttgagcacacgctcttcaagggaacc
tacttccccacctgggagggtctcttctgggaaaaggccagtggtttcgaagagtccatg
aaatggaagaaactcaccaatgctcagagatctggtctgaaccagattcctaatcgacga
ttcaccttgtggtggtctcctacaatcaacagagccaatgtatatgtgggtttccaggtg
cagttggacctcactggaatcttcatgcatggtaaaatcccaactctcaagatctctctg
atccagatcttcagagctcacttgtggcagaagattcatgagagcgtcgtcatggatctc
tgtcaggtgtttgaccaggagctggatgctttggagattgagacagtccagaaagagaca
atccatcccaggaagtcttacaagatgaattcctcctgtgctgacattctgttgtttgcc
tcctacaagtggaacgtctctcgtccctcgcttctagcagactccaaggatgttatggac
agcaccaccacgcagaagtactggattgacattcagctcagatggggtgactacgactct
catgacattgagcgatatgccagggccaagttcttggattacaccactgacaacatgagt
atttacccatcacccactggagtcctgattgccattgatctggcatacaaccttcacagt
gcttatggtaactggttccctggaggtaagcccctgatccagcaggccatggcgaagata
atgaaggccaacccagctctatatgtgctaagagagcgaatccgcaagggtctgcaactc
tactcttcagagcccactgagccttacctgtcttcccagaactacggagagctgttctcc
aaccagatcatctggtttgtggatgacaccaatgtgtatagagtcaccatccacaagacc
tttgaaggaaacttgaccacaaaaccaatcaacggagccattttcattttcaaccccaga
actggacagcttttcctgaagatcattcacacatctgtatgggcaggacaaaagcgtctt
ggccagctagctaagtggaaaactgctgaagaagtggctgccctgatccgatcgctgcct
gttgaagagcagcccaagcagattattgtgaccaggaagggcatgttggatcctcttgag
gtgcacttgctggacttccccaacattgtaatcaagggctctgagctccagctacccttc
caggcctgtctgaaagtggagaagtttggagacctcattctgaaggccacagagcctcaa
atggtcctgttcaatctgtatgacgattggctgaagaccatctcctcttacactgcattc
tctcgtttgatcttaatcctgagagcacttcatgtcaacaatgaccgtgccaaagttatc
ctgaagcctgacaagaccacgatcaccgagccccaccacatctggcccactctgaccgat
gaggagtggatcaaagtggaggtgcagctcaaagatctcatcctggctgactatggcaag
aagaacaatgtgaatgtggcatctttgacccagtctgaaatcagggacatcatcctgggt
atggagatctctgctccatcccagcagagacagcagatcgctgagattgagaagcagacc
aaagagcagtctcagctaacagccacacaaactcgcactgtcaacaaacacggagatgag
attatcacctccaccaccagcaactacgagacgcagaccttctcttccaaaaccgaatgg
agagttagggcgatctctgctgccaacttgcacttacgtactaaccacatctacgtgtca
tcggatgacatcaaagaaactggctacacttacatcctgcccaagaacgttctgaagaag
ttcatttgcatctcagatctgcgtgctcagattgcaggttacctgtatggaaccagtcct
ccagataaccctcaggtaaaggaaatccgctgcattgtgatggtgccacagtggggtaca
catcagaccgttcacctgcccaaccagctgccacaacacgagtacttgaaggaaatggag
cctcttggatggatccatacacagcccaatgaatcgccccagctctctcctcaagatgta
accacccatgcaaaggtcatggctgacaacccatcctgggatggcgagaagactatcatt
attacttgcagtttcacccctggttcctgcacgctaacggcctacaagctgactcccagt
ggatatgagtggggtcgacaaaacacagataagggaaataaccccaaaggttacttgccc
tctcactacgaaagagtccaaatgcttttgtctgaccgtttccttggcttcttcatggtg
cctggccaagtctcctggaactacaacttcatgggtgttcgccatgatcccaacatgaag
tatgacctacagttggccaacccaaaagagttctaccatgaagttcacaggccatctcac
ttcctcaacttcgcttctctgcaggagggtgaactctacaatgctgaccgtgaagatatg
tatgcataa
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integrated database retrieval system
