Sinocyclocheilus rhinocerous: 107757727
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Entry
107757727 CDS
T04916
Name
(RefSeq) tenascin-X-like isoform X1
KO
K06252
tenascin
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04510
Focal adhesion
srx04512
ECM-receptor interaction
srx04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107757727
04518 Integrin signaling
107757727
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107757727
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
srx00536
]
107757727
Glycosaminoglycan binding proteins [BR:
srx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107757727
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_TEN
Fibrinogen_C
EGF_Teneurin
fn3
EGF_2
EGF_Tenascin
hEGF
EGF
DUF7949
EGF_PEAR1L
FN3_Tor_3rd
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
EGF_integrin
Fn3_PBP1
EGF_laminin
Ig_J
Motif
Other DBs
NCBI-GeneID:
107757727
NCBI-ProteinID:
XP_016430775
LinkDB
All DBs
Position
Unknown
AA seq
1097 aa
AA seq
DB search
MALVLPFLLLLLLLPSPALSSQHLQTAAQRVSRDIKPQPIKLVISDTCAQDGATESEIDL
DPDSPLVLTHRIRLVPGSGSVCGQCELDFAALRERIERLEKEVSDLREKCGSPEGCCSSQ
QSKGAVCTTFHPTINECPDDCSDQGRCVDGKCVCFPGFSGPDCSVPDCPDDCSSRGRCVN
GQCVCDPGFTGPDCSSSTCPDNCNDRGRCVNGRCVCDAGFTGPNCGTRGCPDNCNNRGRC
VNGKCVCDSGFTGQDCSEMSCPGKCNGRGRCVNGQCVCDPGFSGPDCSVETCPDNCSKRG
QCVNGKCVCESGFTGPDCSSRSCPGDCSNHGRCVDGRCVCDSGFTGPDCSSKTCPNDCNN
KGRCVNGKCVCDVGFSGQDCSTKTCPNNCSNKGRCVRGRCVCRRGFSGPDCSECQSGFTG
ENCDTVAGVSRLSTKDITESSVALSWTPPVVQYDTYHISFTSRKEMDQKISSKINGRLST
YTQIGLAAGQEYTVSITGEKEGIMGTESTAEFTTLISGPKDLQVVKTTTTSVIVQWEKAQ
GEIDRYVLSIAPNQTDGPSRLPEMNLPPERDSAQIDSLESGRLYDISLVAEKDSIRSLPA
TAQATPGPEPPSNLAFSDVTDSSFMVSWTKPKSKVSGFKITYTHVQEGEPISVSVDSESV
HLALSPMSPGSTYEVRVMSVLGRDESDSIQDTVTTLPDPPTDLRAINVTDSKALLLWRPA
LATVDHYVIVYSSEAAPGSGISIRVSGNAAEEQLQALQSSTRYRVSVHSQLGDLSSSRAT
TAFTTSSGKKADGPHDLRASQVTPRTAVLSWKPPVSAVSSYKLSYYTDGQDSKEVILGPA
VKEFKLTRLYSSSTYTAHLQAERDGLYMSTVSTDFTTGNLRFSFPSDCSQEKQNGALESG
IVEVFPQGREGKPLMLYCDMETDGGGWTVFQRRKDGKTNFFRSWREYSNGFGALDGEFWL
GNEQLHNFTKTSPMTLRVDLRAGDESVYAHYSSFSVDSVKKHYTVRVSGYSGTAGDSLTY
HNGRPFSTRDRDPQPFITRCAMSYRGGWWYKNCHEANLNGLYNTDTNHQGVIWTKWKGKD
FSIPFSEMKFRPASFRP
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggcgttagtgttgcctttcctgcttctgcttctgcttctgccaagtcctgccctctcc
agtcaacatctgcagacagcagctcaacgtgtctccagagacatcaaaccccagcctatt
aaacttgttatttcggacacatgtgcacaagatggggccacagagagcgagatagacttg
gatcctgattctcctctggtcttgacccatcggatccgtctggtgccagggtcaggttca
gtttgtggtcagtgtgagctggacttcgcagccctgcgtgagcgtattgaaagactggag
aaggaggtgtctgatctgagggagaaatgtggaagtccagaaggatgctgcagctcccag
cagagcaaaggtgcggtctgtaccacttttcatcccacgatcaacgagtgtccggatgac
tgcagtgaccagggtcgctgtgtagatggcaaatgtgtgtgtttcccaggattcagtggg
cctgactgcagtgtgccggactgccctgatgactgcagcagccggggccgatgtgtgaac
ggccagtgtgtgtgtgacccaggctttaccggccccgactgctcctccagcacatgtcct
gataactgcaacgacaggggccgctgcgtgaacggcaggtgcgtgtgtgacgctggcttt
accggtcctaactgcgggacacggggctgtccggataactgtaacaaccggggccgctgt
gtgaatggaaaatgcgtgtgtgactcaggattcactggtcaggactgctcagagatgtcc
tgcccggggaagtgtaatggcaggggccgctgtgtgaacggacagtgcgtgtgtgatcct
ggcttctctgggccggactgctctgtagaaacatgtcctgataactgcagcaaacgtgga
cagtgtgtaaacgggaagtgtgtctgtgagagcggctttacgggccccgactgctcgtcc
agatcttgtcctggagactgcagtaaccatggcagatgcgtcgacggccggtgcgtgtgt
gatagcggttttactggaccagactgttcgtccaaaacttgtcccaatgactgcaataac
aaaggcagatgtgtgaatgggaaatgtgtctgtgatgtgggcttctccggtcaggactgc
tccaccaaaacctgccccaacaactgcagtaacaagggccgctgtgtgaggggccggtgt
gtgtgtcgtcgtggtttctcggggcccgactgcagtgaatgtcagtctgggttcacaggg
gaaaactgtgacactgtggcgggcgtctcgcgtctcagtaccaaggacatcactgagtca
tctgtcgctctgtcctggactccacctgttgtgcagtacgacacctaccacatctccttc
accagcaggaaagaaatggatcagaaaataagctccaaaatcaatggcagactgagcacc
tacactcagattggactggccgctggacaggagtatacagtcagcatcacaggagagaaa
gagggcattatgggaacagagagcacagcagaattcactacattgatctctggcccaaaa
gacttgcaagttgtgaagacaaccactacatcagtcattgtccaatgggagaaggcacag
ggggagattgacaggtacgtcctctccattgcacccaatcagacagatggaccaagcaga
cttccagagatgaacctgccgccagagagggattcagcccagatcgacagcttggagtcg
ggccgcttgtatgacatctcattagtggcggagaaagatagcatccggagcctgccagca
accgcacaggcaactcctggccccgagcctccatccaatcttgccttcagcgatgtgact
gacagctctttcatggtgtcctggaccaaaccgaagagcaaggtgtctggattcaagatc
acatacactcacgtgcaagaaggtgagccgatctctgtaagcgtggactcagaatctgtc
cacctggccctctcgccgatgtctcctggctccacctatgaggtccgtgtgatgtctgta
cttggacgagatgaaagtgactccatccaggatactgtaaccactttgcccgacccaccc
acagacctgagggccataaacgtcacagacagtaaagcgctgttgctgtggagacccgcc
ttggcaaccgtcgaccactatgttattgtgtatagttctgaggcagcacctgggtctgga
atcagcatcagagtgtctggcaacgctgcagaagagcagctgcaggcgctgcagtcctcc
acacggtacagagtgagcgttcacagccagctgggagacctgagcagctccagagccacc
acagccttcactacatccagcggtaaaaaagcagatggtcctcatgatctcagagccagt
caggttacgcctcgtaccgcggtgctgtcttggaaacctcctgtatcagccgtcagcagt
tacaagctcagctattacacggatggccaggacagtaaggaagtgattcttggccccgcg
gtcaaggagttcaagttaaccagactgtactcatcttcaacatacacagcgcacctgcag
gccgagcgggacggtctgtacatgagcaccgtctctacagacttcaccacgggaaacctc
cggttctcctttccctctgactgttcacaggagaagcagaacggagcgctggagtctggc
atcgtggaggtgtttccacagggccgcgagggaaagccgctgatgctttactgcgacatg
gagactgatggaggaggctggacggtttttcagcgaagaaaggatgggaagacgaacttc
ttcaggagctggcgtgaatacagcaatggatttggagcgctggatggggaattctggctc
ggaaatgagcagcttcataacttcactaagacgagtccaatgaccctgagagtagacctc
agagcaggagacgagtcggtttacgcacactattcctcgttctctgtcgacagtgtgaaa
aaacactacaccgtcagagtgtctggatattctggtacagccggtgactcactgacgtac
cataacggacggccgttctccacgcgggacagagaccctcagccattcatcacgcgctgt
gccatgtcctatagaggcggctggtggtataagaactgccatgaggccaatctcaacggc
ctctataacacagacaccaaccaccagggagtgatctggaccaagtggaaaggcaaggat
ttctccattcccttcagtgagatgaaattccgcccagcctcattcaggccctga
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integrated database retrieval system
