Sinocyclocheilus rhinocerous: 107757905
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Entry
107757905 CDS
T04916
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1-like
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107757905
Membrane trafficking [BR:
srx04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
107757905
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_2
TPR_1
TPR_8
TPR_14
TPR_7
TPR_NPHP3
TPR_10
SH3_1
SH3_9
ARM_TT21_4th
SNAP
SH3_2
Motif
Other DBs
NCBI-GeneID:
107757905
NCBI-ProteinID:
XP_016430997
LinkDB
All DBs
Position
Unknown
AA seq
1322 aa
AA seq
DB search
MSAAARRNSSKTGNGVKSDPDRIQTVRRELSTEYARNEWDTIMESSSRDYKTSRGSIKGT
PGTPDDNIPTVLAMQLAMVEGPDRLPADEDTQEVLCRKLCVLEADLSGVMTLISELSAHF
VSINSEERTIFITFKTLEEIWKFSTYHKMGFLGQCMENLLMNQEFWLISFDQHSGIEISI
KEETLNLMYKRFLMQEGSFFGCCTANQMFDSSTSGSELYLEKGDIALFEPPFLGSGWTVL
SLADGDRGTKPKPALEPVIPFHEWFLKSCPEGILVGGGKDTSDLPFQIAVGVCEATEEYD
ADGPDELSFVAGERIIILGLLVACFEWFLGKLERTGDTGLVKTNLVKTTSSSCESSDIFL
NDEDRQIVTLDQDKIKEEAIALLKKICQSDVGTNYKLDLAKEIPGSVQNKTHQTELNNLK
QKVKHLLSEGDESQRNYVSSVSIKQQMKKEADDMELSRETPRFSVCSEQDSTSPDGHHAL
LSFLSSRDHQPEFLLLYSTYPEFLISLFEGHSDEEEIVVYLGVARELARKKHVSWAQSRI
CFLLGQLCAGRSKFSQARVYYEEALNVPRDCFTDMFLLSAIYSNLALIYLTQKNHEKCFT
FSERLSALLMAVPDCLFGCEDPEVLKYVLKKAILAKNQLAEARACFLLAKLHLKLKDGMS
AIPFIERLVILADEVPEACEEIMSHVFLVLARLYSDQRWSRLAESCAKRASLQVGATMSH
CLCSVSLLLENASELYGVAIPTQIAPYLTRAAALVPSSKEPVLGHVHALCLSWLFHRHGM
PDRAVRFMSTVLDHSGMSSIGHSDTTAALLWLAWLYICNQQPGTALEVLDAVLSSLPEHC
TTQLEGVVYNMRAISYRHSADIRQAAESYQAAIEICEEFEDRHNWAIALANFGFMCLHIK
AKRLAEEYLTQSVELFSELEDEGHELSFILVLLELGKHFVSQGNHEHGKTYYEWALLIAM
FINHMDSQVQATRHLCQLYEEVCPDEAQCIIYNEHQLNLLQRIGDKSLEGEILEKISQLY
LNLATTKASRAALDYTKQSLGIFIDLGRKRKEAHAWLKAGKIYHILQQTELVDLYVQVAQ
DMALSTGDTLFTLEMLEAAGDVFFNSSQDREKAICFYRDRALPIVVKTSSVRSQLRLCNK
LSELLLQLGQCSEAIEYAQTALDISMSLADHLNERVAFHRLATLYHCLGQFEMAEHHFLK
ALSLCPSPLQYDEEALYYVRVYKTLGDIIFYDVKDPFDAAGYYHLALAAAMDLGNKRSQL
ELCTRLATIYHNFLMDRELSLFFYQRARVFANDLHIRRINLAPDYSFRTTAQYKSTLTGA
TR
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccgctgctcgtagaaactcgtccaaaaccgggaacggcgtaaagtccgatccg
gacagaattcagacggtacgcagagagctgtcgactgagtacgcacgcaatgaatgggat
actattatggagtcttcatctagagattataagacctcaagaggaagcatcaaaggtact
ccaggaactcctgatgataatataccaacagtgttggctatgcagctggctatggtggag
gggccagatcgacttcctgccgatgaggacacacaggaagtgctttgcaggaaactttgt
gtgctggaagctgacctctcaggggtcatgaccttaatctctgaactgtctgctcatttt
gtatccatcaacagtgaggaaaggactatatttatcacctttaaaacccttgaagaaata
tggaagttcagcacataccacaaaatgggcttcttgggacagtgtatggaaaaccttctc
atgaaccaggagttctggttaatctcctttgatcaacattcaggaattgagatctcaatt
aaagaagagacactaaatctgatgtataaacgcttcctaatgcaagaagggtctttcttt
ggatgctgcacagcaaatcagatgtttgatagctctacgtcaggtagtgagctttatctg
gagaagggggatatcgctttgtttgagcctccattcctaggatcagggtggacagtgctg
tcacttgcagatggggatagaggaaccaaaccaaaaccagctctggagccagtcattccc
tttcatgagtggtttctaaagtcctgcccagaaggtatattagtgggtggtggaaaggac
accagtgaccttcccttccaaattgcagtaggggtctgtgaggccacagaggagtatgat
gccgatggaccagatgaactgagtttcgtggctggtgaacgcatcatcatcctgggcctg
ctggtggcctgttttgaatggtttttgggaaaactggagagaactggggatactggactt
gtcaaaaccaacctggtcaaaacaaccagttcatcttgtgaatcatctgacattttcttg
aatgacgaggacagacaaattgttaccttggatcaggataaaattaaagaagaggctatt
gctttattgaagaaaatatgccagtccgatgttggcacaaactacaaacttgatctggcg
aaagaaattccaggatcagttcaaaacaagactcatcagacagaattaaacaatctaaaa
cagaaagtcaaacaccttttgagtgagggagatgagtctcaaagaaactatgtttcatca
gtcagcatcaagcaacagatgaagaaagaagctgatgatatggagttgtcccgggaaacc
ccacgtttttctgtctgctccgagcaggatagcaccagtccagatggacatcatgctctc
ctttcgttcttgagcagtcgtgaccaccagccagagttcctgctcttgtacagcacttac
ccagaattcctcatctcactttttgagggccactccgatgaggaggagatagtggtgtat
ttaggcgtagcccgagaactggcacgaaagaagcatgtctcgtgggcgcagagccgaatc
tgttttcttcttggacagctttgtgcagggaggtcgaagttctctcaagctcgggtttat
tacgaggaagccttgaatgtacccagggattgtttcacagacatgtttctgctctctgcc
atttactccaacctagcactcatctacctaacgcagaagaaccatgaaaaatgtttcact
ttttcagagcgcttgtctgctttgttgatggctgtccctgattgtttgtttggctgtgag
gaccctgaagtattaaaatatgtacttaaaaaggccatcttggccaagaatcagctcgcc
gaggcccgagcctgcttcctcctggccaagctccatctgaagcttaaagatggcatgagt
gcaatccccttcattgaaaggcttgtgatccttgccgatgaggttcctgaggcatgtgag
gagataatgagccatgttttcctggtgttagcaagactctacagtgaccagagatggtca
cgcttggctgaaagctgtgcaaagagagcgtcacttcaggtaggagccaccatgtcacat
tgtctttgtagtgtctcgctattgttggaaaatgcatcagaactgtatggagtggccatc
ccaacacaaatcgctccatacctgacccgtgccgctgctttagtgccctccagcaaggag
ccagtgctgggtcatgtccacgctctgtgtttgtcctggctcttccatagacacggtatg
cctgacagagctgttcgcttcatgtccactgtcctcgaccacagcggtatgtccagtatt
ggccactcagacactactgctgctctcctatggttggcgtggctgtacatctgcaaccag
caacctggcacagctctggaagtgctagacgctgtgctgtcatcgctccctgagcactgt
actactcagctggaaggagtggtttacaacatgcgggccatttcatacagacattcagca
gatatccgacaggccgctgagagttaccaggctgcaattgagatatgcgaggagtttgag
gatagacataattgggccatagcactggccaactttggattcatgtgtttgcatatcaag
gctaaaagattggcagaggaatacctcactcagtcagtggagctgttctctgagcttgag
gatgaagggcatgaactcagttttattttagtgcttcttgagttggggaaacactttgtt
tcccagggaaaccatgagcatgggaagacctactacgaatgggccctgctgattgccatg
tttatcaatcacatggatagccaggtgcaagccacacggcacctgtgtcagctttacgaa
gaggtgtgtccggatgaagcccagtgtatcatctacaacgagcaccagctgaaccttctt
cagcggataggagacaagagcttagagggagagatactggagaagatcagccagctgtac
ctgaacctggctaccacgaaagccagcagagctgctttagattacaccaaacagagcctg
ggcatcttcatcgacttgggcagaaaacgcaaggaggctcatgcctggctaaaggcaggg
aagatttaccacatcctccaacagacggagctagtggacctctatgtgcaggtagcccag
gacatggctttgagcacaggagacacactcttcactctggagatgttggaggcagctgga
gatgtgttcttcaacagttcacaggacagggagaaagccatctgcttttacagggaccga
gcccttcccattgtagtaaagacgagcagtgtgcgctctcagcttaggctgtgtaataag
ctttcagagcttctgctgcagctgggacagtgttcagaggccattgagtatgctcaaact
gcattagacattagcatgagtctggctgaccatttaaatgagcgggtggcattccataga
ctcgctacattgtaccattgtctgggtcagtttgaaatggcagagcaccactttctgaaa
gccttgtccctgtgcccctcacccctgcagtacgacgaggaagccctgtactatgtccgg
gtttacaaaacacttggagacatcatcttctatgatgtaaaggacccatttgatgctgct
ggctattatcacctggccttggctgctgctatggatctgggcaacaagaggtctcagcta
gagctgtgtactcggttggccaccatctatcacaactttctcatggaccgtgaactctcg
ctgttcttctaccagcgagcgagagttttcgctaatgatctccatattcgtcgtatcaac
ctggcaccagactacagcttcaggaccacagcccagtacaaaagcacattaactggggca
acaagatag
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