Sinocyclocheilus rhinocerous: 107757920
Help
Entry
107757920 CDS
T04916
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X1
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03018
RNA degradation
srx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107757920
09123 Folding, sorting and degradation
03018 RNA degradation
107757920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107757920
03041 Spliceosome [BR:
srx03041
]
107757920
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107757920
mRNA degradation factors
5'-3' decay
Lsm complex
107757920
Spliceosome [BR:
srx03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
107757920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
107757920
NCBI-ProteinID:
XP_016431011
LinkDB
All DBs
Position
Unknown
AA seq
147 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVLSKGRGRGGMQQNKPQGKGRGGVPGRGGGSVRGIFGG
RGRGMLGTGRGQQDKKPGKPQGVKNQH
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgctcccgttatctttattgaagacagcacagaaccaccctatgctggtggagttaaag
aatggtgagacgtacaacggccatctggtcagctgtgacaactggatgaacatcaatttg
agagaagttatttgcacctcacgggatggagataaattttggaggatgccggaatgctac
atcagaggaagcaccattaaatacttacgaatccctgacgagatcatagatatggtgaaa
gaggaagtgctatcaaagggacgtggccggggaggcatgcagcagaacaagccacaggga
aagggcagaggaggcgtacctggaagaggcggtggatccgtcagaggtatttttggtggc
cgtggcagaggcatgctgggaactggccgtggacagcaagacaaaaagcctggaaaacca
caaggtgtcaaaaaccaacactag
DBGET
integrated database retrieval system
