Sinocyclocheilus rhinocerous: 107757972
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Entry
107757972 CDS
T04916
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04010
MAPK signaling pathway
srx04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107757972
04020 Calcium signaling pathway
107757972
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
srx04040
]
107757972
Ion channels [BR:
srx04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107757972
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
107757972
NCBI-ProteinID:
XP_016431070
LinkDB
All DBs
Position
Unknown
AA seq
2373 aa
AA seq
DB search
MDRFEDDLPTRYGGGGSPAGPGRGASRQPGPPGGQRMYKQTMAQRARTMAIYNPIPVKQN
YLSVNRSLFIFSEDNIIRKYAKKITEWPPFEYMILATIIANCIVLGLEQHLPALDKTPMS
KRLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLHNGWNVMDFVVVLTGILTVVGPDFD
LRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLDFYMG
KFHHTCFRNDTGEQAADFPCGMEPPARTCEGDTVCRVYWTGPNFGITNFDNILFAVLTVF
QCITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEK
RQEFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKNAEEKEDGAWYKRKCNNPVLKRA
KKSKNDLINAEEGEDHFTDISSVAPQGSPFTRTSVKSSKNESSSYFRRKAKRFRFFIRRM
VKAQSFYWTVLCIVGLNTLCVAIVHYDQPDWLTYALYLAEFVFLGLFLIEMSLKMYGLGP
RTYFHSSFNCFDFGVIVGSIFEVIWAAVKPGASFGISVLRALRLLRIFKVTKYWNSLRNL
VVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGLFNFEDETPTTIFDTFPAAILTVFQ
VLTGEDWNAVMYHGIESQGGVHRGMFCSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQEL
TKDEEEQEEAISKKLALQKAKEVKEVSPMSAANISITAFIRPNPGALSCSSSNSSSHSPS
FVCSPAHHYLSKEQQRSLKMMSVWEQRTTQIRKHIRASSEALYQEELNPRLTSNLHLRPD
MKTHLDRPLVVEPRCDGPISPHRGWDKPQDLQGEGGTLEERVPPVMEPPQSHPPRKHHRH
RERPSNETNENGDTGHGKEGRHHVHHSRSKEHDGTRCKEGKSDRSRSREGGRRHHHQSSV
DEGGGEREHRHHHSHRHNREGNGVVSAGGKSEQRSRQKDGSRSGTREGERCSRGENGGNG
GRRQHRLRTSKAQSTLEGEEQQGNEEKEEGKSHSHRHMDMGGDSLAVNPHQPSVGNRWCL
EKPEDSDNKLNIGQTGGMGTHIPVTVTSPPGETTLIPMNSIDSETMPMTEKNLEDLNQSS
PRPVLPFSSMFIFSPTNPVRRLCHYIVSLRYFEMCILVVIAMSSIALAAEDPVQANAPRN
NVLKYLDYVFTGVFTFEMVIKMVDLGLLLHPGSYFRDLWNILDFIVVSGALVAFTFSSFM
GSHQSVNRGTKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVY
ILFMFIFAVIAVQLFKGKFFYCTDESKGLEKYCRGMFLDYDKDEVSAQPREWRKYEFHYD
NVLWAFLTLFTVSTGEGWPTVLKHSVDATFEDQGPSPGYRMEMSIFYVVYFVVFPFFFVN
IFVALIIITFQEQGDKAMSECSLEKNERACIDFAINAKPLTRYMPQNQQSFQYRLWKFVV
SPPFEYSIMIMIALNTVVLMMKFHGAPDFYEAMLKYLNIVFTALFSMECILKIIAFGPLN
YLKDAWNVFDFVTVLGSITDILVTEINTTDRLLNLSFLRLFRAARLVKLLRQGYTIRILL
WTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIELSDDTAINRHNNFRTFLQALMLLF
RSATGEAWHEIMLSCLSERTCDASSGIHGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVI
MDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRIKYLDMYEMLLHMSPPLGLXKKCP
PRIAYKRLVKMNMPIADDNSVHFTSTLMALIRTALEIKLASGMVAQRLSDAELKKELTTV
WPNLSHKTMDLLVTPHKPNELTVGKVYAALMIFDYYKQNRAKRLQMQQQQQREQAGLGSQ
NKVSALLEPILPLTHMQDQAMHSVDSASEFQAQTRPSSTMLNNGRTHLDNTIKGSSSWAS
EKSKEVQRSKRRPMSRGQSEDASNANTAQESVEMRKMENSANTVTSGGFEGQGRAVSMPK
LNAEMQRSHSRHSPGTLLEPIPDSPMRRSASTFAPQRPQEVNLNDYTLAKPVQERHHHHH
HHHRCHHRRDRDKKQRSLDRSPTGQHKATGTAADPVEERSHDRGRSHERKHHSSSAEKQR
YYSCDRYGSREHCPSKSAVASCATSPIEAQEASLNKQGSGWAKGSPVLLTSGASTPSSGR
RQLPQTPLTPRPSVAYRTANSSPVQFLGTQAGLLPPSPGRLSRGLSEHNALLHSGSISNS
PAPVSRINSEPFLGPPDHPAVLQPEAYAVFQEDLSPQMGRSPQTVGMPIVAIPPPPQQQF
RGVPNGYHFTKGPGASRGRARQYYPEAEVDDWC
NT seq
7122 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcttcgaagacgatctcccgacccggtatggaggcggtggctctccagctggt
ccaggcagaggggccagccggcagccaggccccccgggcggacagaggatgtataagcaa
acaatggcccaaagagcccggacaatggccatatacaacccgataccggtcaaacagaac
tatctctcagtcaaccgatcccttttcatcttcagcgaagataatattattcggaaatat
gcaaagaaaataacagagtggcctccatttgagtacatgattctcgccaccattatagca
aactgcattgtactgggcctagagcagcatttaccagctttagacaagacacccatgtca
aaacgactggatgacactgaaccctacttcatcggaatattttgcttcgaggccgggatc
aagatcatcgctctaggctttgcttttcataaaggctcctacctccacaatgggtggaat
gtaatggattttgttgttgtgttgacggggattctgaccgtagtggggccagactttgat
ttgcggacactcagggcagtaagagtcttgcggccactcaaactggtgtctggaattcca
agtctccaagtggttctgaagtccatcatgaaagcaatggttcctctgcttcagattggc
cttctgctcttttttgctatcctcatgtttgccatcattggtctagacttttacatgggc
aagtttcaccacacctgcttcagaaacgatactggggaacaggcagctgactttccatgt
gggatggaacctccagcacggacgtgtgaaggcgacactgtttgtagggtttactggacc
ggtccaaacttcggcataacaaactttgacaacatcctgtttgctgtgctcaccgtcttc
cagtgcatcactatggaaggatgggtggacatcctttacaatgccaacgatgcctcaggg
aacacctggaactggctctacttcatcccactcatcatcattggctctttcttcatgctc
aacttggttttgggggtgctgtcaggggagtttgcaaaggagcgagagcgtgtggagaaa
aggcaggagttcctgaagcttcgcagacaacagcagatcgagagggagctgaccggctac
ctggagtggatctgcaaggcagaggaagtaatgcttgctgaagaagataaaaatgcagag
gagaaggaggatggtgcctggtacaagaggaaatgcaacaacccagtattgaagagagcc
aagaagagcaaaaatgacctcatcaatgcagaggaaggagaagaccacttcactgacatc
tcatcagtcgctccccagggctctccattcacccgtacaagcgtgaagagcagcaagaac
gagagctcatcatactttcgcagaaaagcgaagaggtttcgcttcttcatccgccgtatg
gtgaaggcccagagcttctactggactgttctgtgtatagtgggactgaacacactgtgt
gtggctatagttcactacgaccagcccgactggctcacatatgcactgtatttggcggag
tttgtattccttggtctgtttctaatagaaatgagtctgaagatgtatggccttgggccc
aggacctactttcactcctcatttaactgctttgactttggggtgattgtgggtagcatt
tttgaggtgatttgggcagcagtaaaaccaggagcctcttttggcattagtgtgttgcga
gcactacgtttgctgaggatattcaaggttaccaagtattggaactcgttacggaatctg
gtggtgtctctgctcaactcaatgaagtccatcatcagtctcctgttcctgctgtttctc
ttcattgtagtgtttgctctgctagggatgcagctcttcggaggactgtttaattttgaa
gatgagaccccgacgaccatctttgacacattcccagctgctatcctgacagtgtttcag
gttctgacaggagaggactggaatgctgtgatgtatcatggaattgaatcccagggagga
gtgcaccggggaatgttctgctccgtgtacttcattgtgctcacactgtttggaaactac
actctcctcaatgtctttttggccatcgctgttgataatcttgccaatgcacaagaactc
accaaggatgaggaggagcaggaggaggccatcagtaagaaactggctctgcagaaagcc
aaggaggtaaaggaggtcagccccatgtcggccgctaacatttccatcacagcttttata
aggccaaatcctggtgctctttcatgcagctcctccaactccagctctcattcaccgagt
tttgtctgctcccctgcacatcactacttgagtaaagaacagcagcgttctctaaaaatg
atgtccgtgtgggagcagcgcaccacgcagattcggaagcacatacgggccagcagtgag
gcattataccaagaagagctcaacccccggctgacctctaaccttcacctccgccctgac
atgaaaacccacctggaccggcctctggtggtggaacctcgttgtgatggtcccatcagt
ccccacagaggctgggacaaaccccaggatttgcaaggggagggcggcacactggaggaa
cgagtcccccctgtgatggagcccccacagtcacacccaccacgcaagcaccaccgtcac
agggagcgtccctccaatgagaccaatgaaaatggtgacacaggtcatggcaaagaaggc
cggcatcacgtccatcacagccgcagtaaggagcatgatgggacacggtgtaaggagggg
aagagtgacaggagccggagcagagaggggggccgcagacatcaccaccagagctcagtg
gatgagggtggtggggagagagaacatcgtcaccatcactcccacaggcataacagagag
ggcaacggagtggtcagtgctggggggaagagcgaacagcggtccaggcagaaggatggc
tcacgttcgggaacaagggagggagagagatgctccaggggcgaaaatggaggtaatgga
gggaggagacagcacagactacgtaccagtaaagctcagtccacgctggaaggagaggag
caacaagggaatgaagagaaggaggagggcaagtcgcacagccacagacacatggacatg
ggaggagattcactggctgtaaacccccatcaaccttcagttgggaaccgatggtgtctt
gagaaaccagaagactcggacaataaactaaatattggtcagactggaggaatgggcaca
cacatacctgtgaccgtcacatctccccctggggaaacaacccttattcccatgaacagt
atagacagtgagacgatgcccatgactgagaagaatctggaggatctgaaccagagcagc
cctcgtcccgtccttcccttcagctccatgttcatcttcagcccaaccaatccggtgagg
cgtctgtgccactacattgtgagtctgcgctactttgagatgtgtatcctggtggtgatt
gccatgagcagtatagccctggctgcggaggacccagtccaagctaatgcccctcgtaac
aatgtcctgaagtatttggactatgtcttcactggtgttttcacttttgagatggtcatt
aagatggtggatttaggtttattgctgcatcctggttcatacttcagggatctgtggaat
attctggacttcattgtggtcagtggtgcactggtggcattcacattctcgagcttcatg
ggatcacatcaaagcgtaaacagaggaaccaagggcaaagacatcagcactatcaagtcc
ctgagggtgttgcgagtcttgcgaccactgaagaccattaaacgtctaccgaaactgaag
gccgtgtttgactgcgtggtgaactccctgaagaacgtgttgaatatcctcattgtctac
atcctgttcatgttcatctttgctgtcattgctgtgcagctcttcaagggcaagtttttc
tactgcacagacgagtccaaaggcctggagaaatactgcagagggatgttcttggattat
gataaggatgaagtatcagcccagcccagggagtggaggaaatatgagttccactacgac
aatgtgctgtgggcgtttctcactctcttcactgtttctactggagagggctggccaacg
gttttgaagcactctgtagatgccacttttgaggaccagggtcccagtccgggctaccgc
atggagatgtccatcttctacgtggtctactttgtggtcttccccttcttcttcgtcaac
attttcgtggccttgataattatcacattccaggaacagggcgataaggccatgtcagag
tgcagtctggagaagaatgagagagcctgcattgactttgctatcaatgccaaaccgttg
acccgctatatgccacagaaccagcagtcctttcagtaccgcttgtggaagtttgtggtt
tctccaccgtttgagtactccatcatgatcatgattgctctcaacactgtggtgctcatg
atgaagttccatggggctcctgacttttatgaagcaatgctcaagtatctcaacattgtt
ttcactgctctcttttcaatggagtgtattctcaagattattgctttcggccccttgaat
tacctgaaagacgcctggaatgtgtttgactttgtgactgtgctgggcagcatcactgac
atcttagttactgagattaacactacggaccgtctgctgaacttgagtttcctgaggctc
ttcagagcagccagactcgtcaaactcctccggcagggatacaccattcgcatcctgctc
tggacattcgtccaatcttttaaggcactgccttatgtttgcctcctaattgccatgctg
tttttcatctacgccatcattggaatgcaggtgtttgggaacattgagttgagtgatgat
accgccataaatcgccacaacaactttcgcactttcctccaagcgcttatgctgttgttc
aggagtgctactggtgaagcctggcatgagattatgctgtcctgtctgagtgagcgcaca
tgtgatgcgagctcgggcattcatggaaaggagtgcgggagtgactttgcctacttctac
tttgtctccttcattttcctctgttctttcctgatgttgaacctgtttgtggctgtcatt
atggacaactttgaatatctgacacgtgattcctccatcttgggccctcaccacctggat
gagtttatccgagtgtgggcagagtatgacccagccgcatgtggccgtatcaagtacctc
gatatgtatgagatgctgctccacatgtccccacctttaggtttgtgaaagaaatgccct
ccacgaatcgcctacaagcggctggtgaaaatgaacatgcccattgcagatgacaacagt
gtgcacttcacctctactttgatggctctgatccgcactgccctagagatcaaactggca
tcaggcatggtggcccaacgtctgtcagacgctgaactgaagaaggagctcactacagtc
tggccaaacctgtctcataagactatggacctgctggtcactccacacaaacccaatgag
cttacagtggggaaggtatatgcggctcttatgatttttgactattacaagcaaaacaga
gccaaaagacttcaaatgcagcaacagcagcagagagaacaggcaggacttggatctcag
aataaagtcagtgctcttttagagcctattctcccactaacccacatgcaagatcaggcc
atgcacagtgtagattcagcctcagagtttcaagctcagaccagacccagctccaccatg
ctcaacaacggacgcacacatcttgacaacacaataaaaggatcttcatcctgggcctca
gagaagtccaaggaggtgcagcggtctaaacggcggccaatgtccagaggtcaatcagag
gatgcctcaaatgcgaacactgcccaggaatcagtagaaatgaggaagatggagaacagt
gccaacacagtgacctctggcggctttgaaggccaaggacgtgcagtatccatgccaaaa
ctcaacgcagagatgcagaggagtcattcccgtcattctcctgggactttactggaaccc
attcccgattcccccatgagacgctccgcatccacttttgcaccacagcgccctcaggag
gtgaatctgaatgactacactttggcgaaacctgttcaagaacgacatcaccaccatcac
catcatcaccgatgccatcatcgtagggacagagacaagaaacagagatctctggacaga
tcgcccactggccaacacaaagctacaggcacagccgctgaccctgtagaggagaggtcg
catgaccgaggtcgttcccacgagaggaagcatcattcgtcttcggcggagaagcagcgg
tattactcatgtgatcgctacggcagtcgggaacactgtcccagcaagtctgccgtggca
agctgtgccacttcgcctatcgaggcccaggaggccagtctcaacaagcagggcagtggg
tgggctaaggggagcccggtgttgttgacctcaggggcgagcactccaagcagtgggcgc
agacagctgccccagaccccccttactcctcgtccctctgtggcctacaggactgccaac
tcctcccctgtgcagtttctgggcacacaggccggcttgcttcccccgagtcccggcagg
ctgagccgcggtctgtccgagcacaacgccctcttacacagcggctccatctccaactcg
ccggcccctgtcagtcgcattaactcagaacccttccttgggcccccggaccaccctgcc
gtcctccaacccgaagcctacgctgtcttccaagaggatctgagccctcagatgggccgt
tctccccagactgtagggatgccgatcgtggcgattcctccacctccccaacagcagttc
cgtggggttcccaatggataccactttaccaagggccccggcgccagcagaggacgggca
cggcagtactacccagaggcagaggtggacgactggtgctag
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integrated database retrieval system
