Sinocyclocheilus rhinocerous: 107758467
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Entry
107758467 CDS
T04916
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107758467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
srx03041
]
107758467
Spliceosome [BR:
srx03041
]
Complex B
Other components
Prp19-related factors
107758467
Complex C
107758467
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
zf-CCCH_2
RRM_occluded
zf-CCCH
RRM_YTH1
Nup35_RRM_2
zf-CCCH_4
RRM_3
zf-CCCH_10
zf-CCCH_12
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
107758467
NCBI-ProteinID:
XP_016431681
UniProt:
A0A673JYU3
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
MATSLGSNTYNRQNWEDSDFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGMSIKDDMPRSDVNKEYYTQN
MEREIQNSDGTRLVGMLGKAQNPSDMLLKLARPTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRSSSMPRLDPPEDKSITTLYIGGLG
ESLTDSELRNHFYQYGEIRTITLVQRQQCAFIQFATRQGAELAAEKTFNKLIINGRRLAV
KWGRSQAAKGTDVKDGFDEMGTGLEPVPGLPTTLPPPPALEEEAPANYFNLDPSSSPALM
NISLPPPPGLSNPLPPGFGAPMFHPMGPPPPPPMALRPPGHIHYPSQDPQRMGAHAAIRH
SD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtccctgggctcaaacacctacaacagacagaactgggaagattcggacttc
cctattctctgtcaaacatgtcttggggaaaatccatacattcgcatgactaaggaaaag
tatggcaaggaatgcaagatatgtgcacgtcccttcactgttttccgctggtgtcctgga
gtacggatgcgctttaagaagactgaggtgtgtcagacctgcagtaagatgaagaacgtc
tgtcagacatgtttgctggacctggagtacggtcttccaatccaggtcagagacacgggc
atgtccatcaaagatgacatgccgaggtctgacgtgaacaaggaatattacactcagaac
atggagagagagatccaaaactcagacggtaccagactggtagggatgctgggtaaagca
cagaaccccagtgacatgctgctgaagctggcgcgacccacgccatactacaaacgcaac
agaccccatatctgctccttctgggtgaagggagagtgtaagagaggagaggagtgtccc
tacaggcatgagaaacccacagaccctgatgatcctctggccgatcagaacattaaagat
cgttattatggcatcaacgacccggtggcggataaacttctgaagagatcatccagcatg
cctcgactggacccgcccgaggacaagtccatcaccacattatacattgggggactggga
gaaagcctcactgactctgagctcagaaatcatttctaccagtacggtgagatccgtaca
atcacgttggttcagcggcagcagtgtgcgttcattcagttcgccacgcgacagggagca
gagctcgcagcagagaagaccttcaataagctcatcattaacggccgcaggctggcggtg
aagtggggccgatcacaggccgctaaagggacggatgtcaaggacgggttcgatgagatg
ggcaccggactagaaccagtacctggtctccctacaactctaccgccaccccctgctctg
gaagaggaagcacctgctaactactttaacctggaccccagcagctctcctgcgctcatg
aacatcagtctgccacctccacccggactctcaaacccactgccaccaggttttggagcg
cccatgttccaccccatgggccctcctccacctcctccgatggctttgagacctccaggc
cacatccattatccttcccaggatcctcagcgcatgggtgcgcatgctgccatccgccac
agcgattga
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