Sinocyclocheilus rhinocerous: 107758574
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Entry
107758574 CDS
T04916
Name
(RefSeq) DNA repair protein XRCC4-like
KO
K10886
DNA-repair protein XRCC4
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
107758574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srx03400
]
107758574
DNA repair and recombination proteins [BR:
srx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
107758574
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4
XRCC4_C
XLF
KASH_CCD
KxDL
DUF3490
Motif
Other DBs
NCBI-GeneID:
107758574
NCBI-ProteinID:
XP_016431832
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MATIGCDARREGNRCELFAEGFGHFDYQFDKRVKVSRLKCVVCCPSPFPSPLHIVSSDLR
GRLFLTHHSVDFLTPVRCCSVRQISIASEPRRTFFLKLEWAEDLGSGFVILLSDGISAWS
GKVSEEDVSREAQEIEMERERYVGDLHLALTGEGPAADGEYSFHLTPERPGRPLLQLSYE
KVQNDISFRLGVVDLQAVPEPTEVIRELISHGLEQSARLQAKNQHLLEENQKLRREQEHI
TKEMQRYVQGKEKLERDLYSRFVLVLNEKKVKLRALQKSVKELEKSVEENRLRKKADSED
HKAMETVADKSPGESDYGGSTEDEQEAEPRQPDPKPLTQEMPESNPMDDSLNDITDVAPC
RKRRHRHLHKLETQAKRAALDQRQRSREKLTEDAKAETSKTSNVQPKPASAAANLDPDDL
FDDI
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaattggttgtgatgcacgacgggagggaaacagatgtgaactgttcgctgag
ggttttggacactttgattatcagtttgacaagcgcgttaaagtcagtcgactcaaatgt
gtcgtatgttgtccttcacctttcccgtcgccgctgcacatcgtcagctctgacctgaga
ggtcggctgtttctcacacatcactcagtggattttctgactcctgtgaggtgttgcagc
gtgcgtcagatctccattgcctctgagcctcgtcgcacgttttttctcaagctagagtgg
gctgaggatcttggatctggctttgttatccttctgtccgatggcatctctgcatggagt
ggtaaagtttcagaggaggatgtgtcccgtgaagctcaggagatcgagatggagcgggag
aggtatgttggtgacctgcatctggctctgaccggagagggaccggcagcggatggggaa
tacagcttccacctgacacccgagagacccggccgccccctgctgcagctgtcttatgag
aaggtgcagaacgacatctcgttcaggctcggcgtggtggatctgcaggcggtgcctgag
cccactgaagtcataagggagctcattagtcatggcctggagcagagcgcacgtctacag
gccaaaaaccagcacctgcttgaggagaaccagaagctgaggagagaacaggaacatatc
actaaagagatgcaaaggtatgtccaggggaaggagaagttggagagagacctgtacagc
cgatttgtgctggtcctaaacgagaagaaagtcaaactcagagctctgcagaaaagtgtc
aaagaactggagaaatctgttgaagagaatcgactgaggaaaaaggcagatagtgaagac
cacaaggcgatggagactgtggcagataaaagtcctggagagagtgattatggaggtagt
acagaagatgaacaggaggctgaacccagacagccagacccaaagcctcttacacaagag
atgccagaaagcaacccgatggatgacagcttaaatgatatcacagatgtggcgccctgc
cgaaaacgccgccaccgtcatctccataagctggagacgcaagccaaacgagcagcgctg
gaccagcgacagagatccagagagaagctgacagaagatgccaaagccgagacgagcaaa
acgtcaaacgtccaaccgaaaccagcaagcgctgctgcgaaccttgatcctgacgacctg
ttcgatgatatatga
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