Sinocyclocheilus rhinocerous: 107758712 Help Entry 107758712         CDS       T04916                                  Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism srx  Sinocyclocheilus rhinocerous Pathway srx04140   Autophagy - animal srx04142   Lysosome biogenesis srx04145   Phagocytosis srx04148   Efferocytosis srx05132   Salmonella infection Brite KEGG Orthology (KO) [BR:srx00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     107758712    04142 Lysosome biogenesis     107758712    04140 Autophagy - animal     107758712    04148 Efferocytosis     107758712  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     107758712  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:srx04131]     107758712 Membrane trafficking [BR:srx04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     107758712 SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C TPR_Vps41 CYP38_PsbQ-like Clathrin VPS18_solenoid_2nd UN_NPL4 Beta-prop_RIG_2nd Motif Other DBs NCBI-GeneID:  107758712 NCBI-ProteinID:  XP_016431998 LinkDB All DBs Position Unknown AA seq 959 aa AA seqDB search MHDAYEPVPILEKLPLQIDCLATWDDWLLVGTKPGHLLLYRVKKDAGTNRFEVTLEKSNK NFSKKIQQLFVVSQYKILVSLLENNIHVHDLLTFQQITVVSKARGATLFACDLQQSSSGE AKLRMCVAVKRKIQLYYWKDRDFHELQGDVTAPDIPKSMAWCENSICVGFKRDYYLIRMD GRGTVKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGVCTQKCALNWTDIPVAME HQPPYIIAVLPRYVEIRTLEPRLLVQSVELQRPRFITSAGSNVVYVASNHFVWRLVPISI ASQIRQLLQDKQFELALQLAKMKDDSDADKRQQIHHIQNLFAFNLYCQKRFDDSMQVFAK LGTDPTHVIGLYPDLLPSDYRKQLHYPNPLPTLSGAELEKAHLALIDYLTQKRSHLVKQL NDSDPFTTSPLMEGTPTIKSRKKLLQIIDTTLLKCYLHTNVALVSPLLRLENNHCHIEES EYVLKKAHKYSELIILYEKKGLHQKALQVLLDQSTKANSPLKGHERTVQYLQRLGVENLG MIFEFSPWVLKICPEDGLKIFTEDLTEVETLPRDKVLNFLKDGFKDLAIPYLEHIIYMWD ETRPEFHNVLIQLYLEKVQGLMKVYLNSLPEGVPAVAAGKESGELGEYRNKLLSFLEVSS SYEPERLISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTHMAEERPNKVYLSLLR MYLSPPDVHFLGPIKMELCEPQANLQAALKVLQLHHSKLNTTKAINLLPANTQIREIQVF LESVLEEKAGRKRFDQVLKSLLQAEFLRVYLSLLRMYLSPPDVHFLGPIKMELCEPQANL QAALKVLQLHHSKLNTTKAINLLPANTQIREIQVFLESVLEEKAGRKRFDQVLKSLLQAE FLRVQEERIFHQQVKCVITDEKTCRVCKKKIGNSAFARYPNGVVVHYFCCKDRSVCPAE NT seq 2880 nt NT seq  +upstreamnt  +downstreamnt atgcatgacgcatacgaaccagttcctatcctggagaaattacccctccagattgactgt ctggcgacctgggatgattggctccttgtggggaccaaaccaggccatctccttctgtac agggtcaagaaagatgcaggtacaaacaggtttgaagttactttagagaaatccaataag aacttctcaaagaagatccagcagctttttgtggtgtcacagtacaagattttggttagt ctgttggaaaataacatccacgttcacgacctgctcacgttccagcagataactgtggtg tccaaagccagaggggccacactgtttgcctgtgacctgcagcagtccagctctggcgag gccaaactgcgcatgtgtgttgcagtcaagaggaaaattcagctgtattactggaaggac agagatttccatgaattacagggggatgtcaccgctccagacattcccaagtccatggct tggtgtgagaactccatatgtgtgggtttcaaacgagactactatctgatccggatggac ggacgtggcacagtcaaagaactgtttcccacagggaaacagctggaaccattggtggcc ccgctggctgatgggaaggtcgcagtgggtcaggatgacctcacggttgttttaaacgaa gaaggcgtctgcactcagaaatgtgcccttaactggacggacattcctgttgcaatggag caccagccaccgtacatcatcgcagtgctgccacgctatgtggagatccgcacgcttgag cccagactgctggtgcagagcgtagaactgcagagaccgcgcttcatcacctccgctgga tcaaatgtcgtgtacgtcgcgagcaatcattttgtttggcgtctggtgcccatctctata gccagccagatacgacagctgctacaggacaaacagtttgaactggcacttcaactagcg aaaatgaaggatgattcagatgcagacaagagacaacagatccatcacattcagaacctg tttgccttcaacttgtactgtcagaaacgctttgacgactccatgcaggtgtttgctaag ttaggcacagatcccactcatgttattggactgtatccagacctgcttccctctgactac cgcaaacagctgcactaccccaaccctctgcccacactgtctggagccgagctggagaaa gcccacctggccctcatagactacctgacacagaaacgcagtcatttagtgaagcagctg aatgactcggaccccttcaccacctcccctctcatggaggggacccccaccatcaagagc cgcaagaagctccttcagatcatcgacaccactctgcttaaatgttacctccacacgaat gtagctttggtgtcgcctctcctgcgtctggagaacaaccactgtcacatagaggagagc gagtatgtgctgaagaaagcccacaaatacagcgaactcatcatcctctatgagaaaaaa ggccttcaccagaaagctctgcaggttctgctggatcagtccactaaagccaactctcct ctgaagggtcatgagaggactgtacagtatcttcagaggctgggtgtggagaacctgggc atgatatttgagttttcaccgtgggttctgaagatttgtccagaggatggactgaagatc ttcactgaggacctgacggaggtggagactctgcccagagataaagtgttgaacttcctg aaggacggcttcaaggatctggccatcccgtacctggagcacatcatttacatgtgggac gagacacgccccgagttccacaatgttctgatccagctctacctggagaaggtgcaaggc ctcatgaaagtgtacctcaactcactgcctgaaggtgttccagctgtagctgcaggaaag gaatcaggagagctgggagagtacaggaacaagcttctgtcgtttctggaagtttccagc agctatgagccagagagactcatcagtgatttcccatttgatggtctgttggaggagagg gctcttctgctaggtcgtatggggaaacatgagcaggctctcttcatctacgttcacatt ctgaaagacacgcatatggctgaagaaaggccaaataaagtgtatctgtccctgctgcgc atgtatctgtctcctccggatgtgcacttcctcgggcccattaagatggagttatgtgag ccacaggcgaacctccaggcagccctgaaagttcttcagctccaccacagcaaactaaac accaccaaagccataaacctgctgccagccaacacacagatccgagagatccaggtcttt ctggagagtgtgctggaggagaaggctgggaggaagcgctttgaccaggtcctgaagagc ctccttcaggccgagttcctgcgggtgtatctgtccctgctgcgcatgtatctgtctcct ccggatgtgcacttcctcgggcccattaagatggagttatgtgagccacaggcgaacctc caggcagccctgaaagttcttcagctccaccacagcaaactaaacaccaccaaagccata aacctgctgccagccaacacacagatccgagagatccaggtctttctggagagtgtgctg gaggagaaggctgggaggaagcgctttgaccaggtcctgaagagcctccttcaggccgag ttcctgcgggtgcaggaggaacgcatctttcaccagcaggtgaagtgtgtcatcacagat gagaaaacctgcagagtgtgcaagaagaagatcggaaacagtgcctttgccaggtatcca aacggagtggtggttcactacttctgctgtaaagatcgcagcgtgtgtccagcggagtag

DBGET integrated database retrieval system