Serratia plymuthica S13: M621_00540
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Entry
M621_00540 CDS
T02716
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
sry
Serratia plymuthica S13
Brite
KEGG Orthology (KO) [BR:
sry00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
M621_00540
Enzymes [BR:
sry01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
M621_00540
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GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
Motif
Other DBs
NCBI-ProteinID:
AGP42522
UniProt:
S4YAJ2
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Position
128133..130139
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AA seq
668 aa
AA seq
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MRVRRSLTIKQMATVSGVALVTICIFIVIQLFHFVQQRRDDYAQQLENIAHSVRQPLAEA
VLRMDVPETKRVLNTLLPVGILTRADIVLPNEFQALHANFPPERPVPTLIARLFELPIQI
SVPLYSLERVPANPQPLAYLVLQADSFRMYQFILSMLSTMLSTYLLLALILSVAISWCMN
RLMVHPLRAMAKELENISQDEAPYHQLMLPALHQDDELGLLVRNYNRNQQRLAKAYAEMS
RLSTRHPVTELPNQALFTALLEQHIASSLRPDRFNLLVIGIETLHEASGVLNPAMREALL
LTLAKKLRECIDENGVLAQLSNTEFAILAKGVERPFHAMQLARRIMAQINAPLSLQEMPL
RPSASIGIAHYLNVGESAEQLLRSATSAMMSAHREGKNQILFFEPSLTERTQKRLTQESE
ILHAIEQRRFTLFLQPQMDMQSNAVIGAEALLRWQQYDGSFTLPADVIPLAEELGVIVPL
GNWVLEESCRILADWQTRGITLPLAVNISATQMQHEDFIPHLKSMLAQHHIDPRKLLLEI
TETVRIDDLDRALALLRELHDLGLSIALDDFGMGYSSLNYLNRLKCLPIDLIKIDKSFIQ
GLPADDAMVRIVSSISEVLHLPVMAEGVENAGQRDWLLQHGIHSGQGFLFARPLPRAEFE
AQFCQPPA
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
ttgcgggtcaggcgttcattaacgattaaacagatggcaacggtgtccggcgtggcgctg
gtgacgatctgcatatttatcgtgatccagttattccactttgtgcagcagcgcagggat
gactatgcccagcaactggaaaacattgcgcattccgtacgccaaccgctggcggaagcc
gtactgcgcatggacgtgccggaaaccaagcgggtgctgaataccctgctgccggtgggc
atattgacccgtgcggatatcgtgctgccgaatgagtttcaggcactgcacgccaacttc
ccgccggaacgtccggtacctacgttgatcgcccgcctcttcgagctgccgatccaaatt
tccgttccgctctattcgctggagcgcgtgcccgccaatccgcagcctctggcttatctg
gtgctgcaggccgattcgtttcgcatgtaccaattcattctcagcatgttgtcgaccatg
ctgtcgacctatttgctgctggcgttgattctgtcggtcgcgatcagctggtgtatgaac
cggttgatggtgcatccgttgcgcgccatggcgaaagagctggaaaatatttcgcaggac
gaagcgccgtatcaccaactgatgctgccggccctgcaccaggacgatgagctggggttg
ctggtgcgcaattacaaccgcaatcagcagcggctggcaaaagcctatgccgagatgagt
cgcctgagcacgcgccatccggtaaccgagctgcccaaccaggcgctgtttaccgccctg
ctggagcagcatatcgcctccagtctgcgccccgatcgcttcaacctgctggtcatcggc
attgagacgctgcatgaggcatccggcgtgctcaatccggcgatgcgcgaagcgctgttg
ctgacgttggcgaagaagctgcgcgagtgtatcgatgagaacggcgtgctggcgcaactg
agcaacaccgagtttgccattttggccaaaggcgttgagcggccgttccacgccatgcag
ttggcgcggcgcattatggcgcagatcaatgcgccgctgagcctgcaggaaatgccgttg
cggccaagcgccagcatcggcatcgcccactatctcaatgtcggggagagtgcggaacag
ctgctgcgcagcgccacttcggcgatgatgtcggcgcatcgtgaaggcaagaaccagatc
ctgttctttgaaccgagcctgacggaacgcacccaaaagcgcctgacgcaggaaagtgaa
attctgcacgccattgagcaacgccgcttcactctgtttttgcagccgcagatggacatg
cagtccaatgcggtgatcggcgccgaggcgctgctgcgttggcagcaatacgacggcagt
tttactctgccggcagacgtcattccgttggccgaggagcttggcgtgattgtgccgctc
ggcaactgggtgctggaggagtcctgccgcattctggcggactggcagaccagaggcatt
acgctgccgttggcggtcaacatttccgccacccagatgcagcatgaagactttattcca
cacctgaagagcatgttggcgcagcatcatattgatccgcgcaagctgctgctggaaatt
accgaaacggtgcgcattgacgatctcgatcgcgcgttggcgctgttgcgggaactgcac
gacctggggctgtcgattgcgctggacgattttggtatgggatattccagccttaattac
cttaaccgcctgaaatgcctgccgatcgatctgattaaaatcgacaagagttttattcag
ggattgccggcggatgacgcgatggtgcgtatcgtcagttcgatttctgaggtgctgcat
ctgccggtgatggctgaaggcgtcgaaaatgccgggcagcgcgactggctgttgcagcac
ggtattcacagtggtcaggggttcctgtttgcccgtccgttgccgcgcgcggaatttgaa
gcgcagttctgccaaccgccagcctaa
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