Serratia plymuthica S13: M621_00730
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Entry
M621_00730 CDS
T02716
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sry
Serratia plymuthica S13
Pathway
sry03420
Nucleotide excision repair
sry03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M621_00730 (uvrD)
03430 Mismatch repair
M621_00730 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sry03400
]
M621_00730 (uvrD)
Enzymes [BR:
sry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M621_00730 (uvrD)
DNA repair and recombination proteins [BR:
sry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M621_00730 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
M621_00730 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
PhoH
Motif
Other DBs
NCBI-ProteinID:
AGP42554
UniProt:
S4YCP4
LinkDB
All DBs
Position
168206..170377
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AA seq
723 aa
AA seq
DB search
MVPMDVSDLLDSLNEKQREAVAAPRCNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSI
MAVTFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHMDANLPQDFQILDSD
DQFRLLKRIVKALNIDEKQWPPRQAMWYINGKKDEGLRPQHVETYNNPVEATWLRIYQAY
QEACDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNVLVDEFQDTNSIQYAWIRLLS
GNNSNVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAQTVRLEQNYRSTSNILKAANTLI
ANNGGRMGKNLWTEGAEGEPISIYCAFNELDESRFVVGRIKTWQENGGALNDCAILYRSN
AQSRVLEEALLQTAMPYRIYGGQRFFERQEIKDALAYLRLIANRNDDAAFERVVNTPTRG
IGDRTLDEVRRTARDRQLTLWQATRALLQDKVLAGRAASALQRFTELVDSLAHETADMPL
HVQTDRVIRDSGLFIMYEQEKGEKGQARIENLEELVTATRQYSYQDEDQDLMPLQAFLSH
AALEAGEGQADAYQDAVQLMTLHSAKGLEFPLVFIVGMEEGMFPSQMSLDEGGRLEEERR
LAYVGLTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEDCVEEVRLRASVSRPVNHR
RMGTPISENDTGYKLGQRVRHPKFGEGTIVNLEGSGEHSRLQIAFPGEGIKWLVAAYARL
ETV
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctatggacgtttccgatctgctcgacagcctgaatgaaaaacaacgcgaagcc
gtggcggcgccacgctgcaacctgttggtgttggccggcgcgggcagcggtaaaacccgg
gtgctggtgcatcgcatcgcctggttgctgtcggtagagaactgttcgccgtattcgatt
atggcggtgacgttcaccaacaaggcggcggcggaaatgcgccatcgtatcgaacacctg
attggcaccagccagggcggcatgtggataggtactttccacggtctggctcaccggctg
ttgcgcgctcaccatatggacgccaacctgccgcaggatttccaaatcctcgacagcgac
gaccagtttcgcctgctgaagcgcatcgttaaggcgctgaatatcgacgaaaaacaatgg
ccgccgcgtcaggcgatgtggtacatcaacggcaaaaaagacgagggcctgcgcccgcag
cacgttgaaacctataacaacccggtggaagcgacctggttgcgtatctatcaggcctat
caggaagcttgcgaccgcgccgggctggtggattttgccgagctgctgctgcgcgcccat
gagctgtggctgaacaagccgcatatcctcaatcactaccgcgagcgcttcaccaacgta
ttggtggacgagttccaggataccaacagcatccagtacgcctggatccgcctgctgtcc
ggcaataacagcaacgtgatgatcgtcggcgacgatgaccagtcaatttacggctggcgc
ggcgctcaggtggaaaacatccagcgtttcctgaaggatttccccggcgcgcaaaccgtg
cgcctggaacagaactaccgttcgaccagcaatattctgaaggccgccaataccctgatc
gccaacaacggcgggcgcatgggtaaaaacctgtggaccgagggggccgaaggcgaaccc
atctccatctattgcgcgttcaacgagctcgacgagtcgcgctttgtcgtcggccgtatc
aaaacctggcaggaaaacggcggtgcgctgaatgactgcgcgatactctaccgcagcaac
gcccagtcgcgcgtgctggaagaggcgctgttgcaaaccgccatgccgtaccgcatttat
ggcgggcagcgcttcttcgagcgccaggaaatcaaggatgcactggcctatttgcggctg
atcgccaaccgtaacgacgacgcggcgtttgagcgcgtggtgaataccccgacgcgcggc
attggcgaccgaacgctggacgaagtgcgccgcacggcgcgcgatcgccaactgacgctg
tggcaggctacccgtgcgctgttgcaggacaaagtgctggccgggcgtgcggcgtccgcg
ctgcaacgttttaccgaattggtggattccctggcgcacgaaaccgcagatatgccgctg
catgtgcagaccgaccgggtgatccgcgactcggggctgttcatcatgtatgagcaggaa
aagggtgaaaaaggccaggcgcgtatcgaaaaccttgaggaactggtgacggcaacgcgg
cagtacagctatcaggatgaagatcaggatctgatgccgctgcaggcgtttttgtcacat
gccgcgctggaagcgggcgaggggcaggccgatgcctatcaggatgcggtgcaactgatg
accctgcactccgccaaggggctggagtttccgctggtgtttatcgtcggtatggaagag
gggatgttcccgagccagatgtcgctggacgaaggcggccggctggaagaagagcgccgg
ctggcctacgttggcctgacgcgcgccatgcagaaattgacgctgacctatgccgaaacg
cgccgtttgtacggcaaagaggtttatcaccggccttcgcgttttatcggcgaactgccg
gaagactgtgtggaagaagtgcggctgcgcgccagcgtatcgcggccggtgaatcatcgc
cggatgggcacgccgatcagcgaaaacgacaccggctacaagcttggccagcgggtgcgc
catcccaagtttggcgagggtaccatcgtcaatctggaaggcagcggcgaacacagccgg
ttgcaaattgcgtttccgggcgaaggcatcaagtggctggtggcggcttacgcccggctg
gagacggtataa
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