Serratia plymuthica S13: M621_02855
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Entry
M621_02855 CDS
T02716
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sry
Serratia plymuthica S13
Brite
KEGG Orthology (KO) [BR:
sry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sry03400
]
M621_02855
DNA repair and recombination proteins [BR:
sry03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
M621_02855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
DUF7125
RecA_N
GvpD_P-loop
AAA_22
SLFN-g3_helicase
AAA_14
AAA_16
ABC_tran
NTPase_1
Rad51
nSTAND_NTPase5
AAA
nSTAND3
AAA_24
cobW
Zeta_toxin
AAA_5
AAA_29
Viral_helicase1
DZR
Motif
Other DBs
NCBI-ProteinID:
AGP42898
UniProt:
S4YJ83
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All DBs
Position
609090..610475
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AA seq
461 aa
AA seq
DB search
MAKAAKRAFVCNECGADYPRWQGQCSACHAWNSITEVRLAAVSSSSRSERLSGYAGDAGI
SKVQKLSDISLDELPRFSTGFLEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQVLCKLS
EQMKTLYVTGEESLQQVAMRAHRLGLPTGNLNMLSETSIEQICLIAEQEQPKLMVIDSIQ
VMHMADIQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS
VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSV
MVVWEGTRPLLVEIQALVDHSMMSNPRRVAVGLEQNRLAILLAVLHRHGGLQMSDQDVFV
NVVGGVKVSETSADLALLMSLVSSLRDRPLPNDLVVFGEVGLAGEIRPVPSGQERISEAA
KHGFKRAIVPHANVPKKPPANMQVFGVKKLADALDVLEQFY
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaagcagcaaaacgggcgtttgtatgtaatgagtgcggcgcagattatccgcgc
tggcagggacagtgcagcgcttgtcacgcctggaacagcattacagaagttcgtctggct
gcggtgtcctcttcttctcgctccgagcgtttaagcggctatgccggcgatgccggcatc
agcaaagtgcaaaaactgtcggacatcagcctggacgagttgccgcgtttttctaccggc
tttcttgagtttgaccgcgtactgggcggcggcgtggtgccgggcagcgcgatcctgatc
ggcggcaaccccggcgccggtaaaagtactctgctgttgcaggtgttgtgcaagctgtcc
gagcagatgaaaaccctgtacgtcaccggcgaggaatcgctgcaacaggtggcgatgcgc
gctcaccgcctcgggttgccgaccggcaacctgaacatgctgtcggaaaccagtatcgag
cagatttgcctgatcgccgaacaagagcagccgaagctgatggtgatcgactcgatccag
gtgatgcacatggcggatatccagtcttcgccgggcagcgtggcgcaggtgcgggaaacc
gccgcctacctgacgcgcttcgccaaaacgcgcggcgtggcgattgtcatggtcggccac
gtcaccaaagacggctcgctggccgggccgaaggtgctggaacactgtatcgactgttcg
gtgctgctggacggcgatgccgattcgcgttttcgtacgctgcgcagccacaaaaaccgc
ttcggtgcggtgaacgagctgggcgtgttcgccatgaccgagcagggcctgcgagaagtc
agcaacccgtccgccatctttctcagccgtggcgatgaagtcacctccggcagttcggtg
atggtggtttgggaaggaacccggccgctgctggttgagatccaggcgctggtggatcat
tcgatgatgtctaacccgcgtcgggtcgcggtcggcctggagcagaaccggctggcgatc
ctgttggcggtgctgcaccgccacggcgggttgcagatgtcggatcaggatgtgtttgtg
aacgtggtcggcggggtgaaagtcagcgaaaccagcgccgatctggcgttgctgatgtcg
ctggtgtcgagcctgcgcgatcgcccgctgccgaacgatttggtggtgttcggtgaagtg
gggttggcgggggagatccgtccggtgccgagtgggcaggagcgcatttccgaggcggcg
aagcacggcttcaagcgcgctatcgtgccgcacgccaacgtgccgaaaaagccgccggcg
aatatgcaggtgttcggcgtgaagaagcttgcggacgccctggacgtgctggaacaattc
tattaa
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