Serratia plymuthica S13: M621_03625
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Entry
M621_03625 CDS
T02716
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sry
Serratia plymuthica S13
Brite
KEGG Orthology (KO) [BR:
sry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sry03016
]
M621_03625 (truD)
Enzymes [BR:
sry01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
M621_03625 (truD)
Transfer RNA biogenesis [BR:
sry03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
M621_03625 (truD)
Prokaryotic type
M621_03625 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AGP43044
UniProt:
S4YEC9
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All DBs
Position
795664..796710
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AA seq
348 aa
AA seq
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MDMANLTWLHGQPQSTGVLKASPEDFVVVEDLGFEPDGEGEHVLVNIRKNGCNTQFVADY
LARFAGIHARSVSYAGLKDRHAVTEQWFCLHLPGKETPDFSQFSLEGCEVLASARHLRKM
RIGTLKGNAFTLVLRQISDRQDVEQRLQAIAAGGVPNYFGSQRFGRGGNNLVMARRWAND
EIRVKERSKRSFYLSASRSALFNLIASRRLANQQHRTVLEGDALQLTGRGSWFVAKPDEL
AELQQRLDAGELLITAPLPGDGEPGTAGEALNVEQQCLAEQPELMALLKRERVDPARRAL
LLQPQKMQWNWWDDATVELRFWLPAGSFATSVVREIMRQESSDADISE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggatatggctaatttgacctggctgcacggccagccgcaaagcacaggcgtgctgaaa
gccagcccggaagatttcgtggtggtggaagatctgggctttgagccggacggagaaggc
gaacatgtgctggtgaacatccgcaagaacggatgtaacacccagtttgtcgccgattat
ctggcgcgtttcgccggcattcacgcccgttctgtcagctacgccggcctgaaagatcgc
catgcggtgaccgaacaatggttctgcctgcatctgccgggcaaagaaacgcctgatttc
agccagttctcgctggagggctgcgaagtgctggccagtgcccgccatctgcgaaaaatg
cgcatcggtacgctgaaaggcaatgctttcactctggtgctgcgtcagatctccgatcga
caggatgtggaacagcgcctgcaggccattgcggcgggtggcgtgccgaactatttcggc
agccagcgttttggtcgcggtggcaataacctggtcatggcgcgtcgctgggcgaatgat
gagatccgggttaaagaacgcagcaagcgcagtttttatctttccgccagccgcagcgcg
ctgtttaacctgatcgccagccggcgcttggccaatcaacagcaccgcacggtgctggaa
ggggatgcgctgcaacttaccggccgcggcagttggtttgtcgccaaaccggacgaactg
gctgagttgcagcagcggctggatgccggtgagctgttgattaccgcaccgttgccgggc
gacggcgaaccgggcaccgccggggaagcgctgaacgttgaacaacaatgtttggcggaa
cagccggagctgatggcgttgttaaagcgggaacgcgttgatccggctcgtcgcgcgttg
ttgctgcagccgcaaaagatgcagtggaattggtgggacgatgccaccgttgaattgcgt
ttttggctgccggccggcagttttgccaccagcgtggtgcgcgaaatcatgcggcaagag
agcagtgacgcggacattagcgagtaa
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