Serratia plymuthica S13: M621_04270
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Entry
M621_04270 CDS
T02716
Name
(GenBank) ligand-gated channel protein
KO
K02014
iron complex outermembrane recepter protein
Organism
sry
Serratia plymuthica S13
Brite
KEGG Orthology (KO) [BR:
sry00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sry02000
]
M621_04270
Transporters [BR:
sry02000
]
Other transporters
Pores ion channels [TC:
1
]
M621_04270
BRITE hierarchy
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AGP43130
UniProt:
S4YF55
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Position
complement(916200..918395)
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AA seq
731 aa
AA seq
DB search
MKRKHLWVLNPCLLAMLAPTAWAEEQKSEDQMVVSASRSHRSVAEMAQTTWVIESQEIEQ
QVQGGKEIKDILAQLIPGMDVSSQGRTNYGMNMRGRSMMVMIDGVRLNSSRSDSRQLDSI
DPFNIEHIEVISGATSLYGGGSTGGLINIITKKGQKEKQVELQVGGKTGFGGHNDHDENV
SAAVSGGNDNASGRLSVSYQRYGGWYDGKGNEVLIDNTQTGLQYSDRIDVMGTGTINIDD
HQQLQVTTQYFNSESDGKHGLYLGQNFSAVTGAGQASNGSNLNSDRIPGTERHLINLQYS
NTDFWGQDLVAQVYYRDESLTFYPFPTLTSGKVTSIGASQQKTDFYGGKLTLNSKPIDAL
TLTYGVDAEHESFNANQQFFNLAKAQQSGGMTLENAYNVGRYPGYTTTNLAPFLQASYDI
DPMFTLSGGVRYQYTENKVDDFVGYAQQQGIANGLANSADAVPGGKTDYNNALFNAGLLA
HLTERQQAWINFSQGFEIPDLAKYYGSGTYKLVNGHYQLQKSVNVNDSKLEGIKVNAYEL
GWRYTGDNLRTQVAAYYSLSDKTISINRTDMTINLDSDKRRIYGVEGAVDYFFDNSEWST
GTTFNLIKSETKTDGKWEKLTVDTASPSKATAYVNWAPGDWNLRMQSQQTFDVSDADGNK
INGYNTLDFLGSYALPVGKVSFSVENLLDKNYTTVWGQRAPILYSPTYGSPELYSYKGRG
RTFGLNYSVLF
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcaaacacctttgggtattgaacccatgcctgctggcgatgcttgcgccgacg
gcctgggcagaagaacaaaaaagcgaagatcaaatggtggtatccgccagccgctcgcac
cgtagcgtggcagagatggcgcaaaccacctgggtgattgaaagccaggaaattgagcag
caggtccagggcggcaaggagatcaaagatatcctggcgcaactgatcccgggcatggat
gtcagcagccagggccgtaccaactacggcatgaacatgcgtggccgttcgatgatggtg
atgatcgacggtgtgcgtttgaactcttcgcgcagcgacagccgccagttggattccatc
gatccgttcaacatcgagcacattgaggtgatttccggcgccacctcgctgtatggcggc
ggcagcaccggcggcctgatcaacatcatcaccaagaaagggcaaaaagagaaacaggtt
gagctgcaggtaggcggaaaaaccggtttcggcggccataacgatcacgacgagaatgtg
tcggcggcagtcagcggcggcaacgataacgcttcgggccgcctgtcggtctcctatcag
cgttacggcggttggtacgacggcaaaggcaatgaggtgttgattgataacacccaaacc
gggctgcaatattccgatcgtatcgacgtgatgggcaccggcaccattaacattgacgat
caccagcagttgcaggtgacgacgcagtatttcaacagcgagtcggacggcaagcacggc
ctgtatctggggcaaaatttctcggccgtgactggtgcgggccaggcctccaacggcagc
aacctgaattcggaccgtataccgggcaccgaacgccatctgattaacctgcaatattcc
aacaccgatttctggggccaggatctggtggcgcaggtctattatcgcgacgaatcgttg
accttctacccgttcccgacgctgaccagcggcaaagtcaccagcatcggtgcctcacag
cagaaaaccgatttttacggcggcaaactgacgctgaacagcaagccgattgacgccctg
acgctgacttacggcgtcgacgccgaacatgaaagcttcaacgccaaccagcaattcttc
aatctggccaaggcgcagcaatccggcggtatgacgctggaaaatgcctataacgtcggc
cgctatcctggttataccaccaccaacctggcgccgttcctgcaggccagctacgacatc
gatccgatgttcaccctcagcggcggcgtacgttatcagtacaccgagaacaaggtggac
gactttgtcggctatgcgcagcaacaagggatcgccaacggtctggcgaactccgccgat
gcggtgccgggcggcaaaaccgactacaacaacgccttgttcaacgccggtttactggcg
cacctgaccgaacgtcagcaagcatggatcaacttctcgcaaggctttgagatcccggat
ctggcgaagtactacggttcgggcacttataagctggtcaacgggcactatcagttgcag
aaaagcgtcaacgttaacgactccaagctggaaggcatcaaggtcaacgcctacgagttg
ggctggcgctacaccggcgacaacttgcgtacccaggtcgctgcctattactcgctgtcg
gataaaaccatctcgatcaacagaaccgacatgaccattaacctggattcggataaacgc
cggatttacggggtggaaggtgcggtggattacttcttcgataacagcgaatggagcacc
ggcaccacctttaacctgatcaaatcggaaaccaaaaccgacggcaagtgggagaaactg
accgtcgacaccgccagcccgtcgaaagccaccgcctacgtcaattgggctccgggcgac
tggaatcttcgcatgcagtcgcagcagacgttcgacgtttcggatgccgacgggaataaa
atcaacggttacaacaccctcgatttcctcggcagctacgcgttgccggtggggaaagtc
agcttcagcgtggaaaacctgctggacaagaattacaccaccgtctggggccagcgtgcg
ccgatcctttacagcccaacctacggctcgccagagctgtacagctataaaggccgtggc
cgcacctttggtctgaactactcagtgctgttctga
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