Serratia plymuthica S13: M621_04885
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Entry
M621_04885 CDS
T02716
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sry
Serratia plymuthica S13
Brite
KEGG Orthology (KO) [BR:
sry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sry03400
]
M621_04885
DNA repair and recombination proteins [BR:
sry03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M621_04885
Archaeal homologous recombinant proteins
M621_04885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
nSTAND3
cobW
DUF5798
AAA_21
TsaE
AAA_14
NTPase_1
AAA_22
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
AGP43241
UniProt:
S4YFX1
LinkDB
All DBs
Position
complement(1039188..1042442)
Genome browser
AA seq
1084 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNVTPSQNELMTRHTAESLAEVEFEVKGVGYRAFWSQRRAKNAPDGNLQAPKVELALRED
GKILADKVRDKLDLTAAITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTEI
YGQLSERVFEQHKQAKADLDALHQRASGIELLNDEQRQQLESQLAELSAQETALSGQTRQ
QQQALNWLQQWQRTQHQQQEYQRQLNIVQQEQAAAKPQLQQLARSEPAEKLRPLHNDRHR
CRSEQQALQQQIAQMAQQQEHQLAQMAPLQQAVEKARAEQQAQAERQQIQQRLIDEQIVP
LDHQIAQLQKTQTELQQACDNAARQCHQQTTDLEQLNVQRSQLTAQTGQHQEKLNGLNAA
LMAQQQQQNALEAQSPLAALRRRQAELAELRPARQQLFTLSSLFRQTSERLEQQRKEFTA
RQAQLGEHEQQLEETRRHYKQQKAHQLDVEKALELEKRIVSLEAERALLQSGEPCPLCGS
ASHPAIEQYQAVKPSETALRLAEMRVKTEALYTQGTELRTRCESLKEQQQRQQQQIAQDE
QQLAAQRQQWQTLSAPLAFDFDLQDAERLSQWLNACDSEERQGQQGLAQHEQAAQTVQQA
KDALAELQAQQQQAQQQQALLDERFTLLEKNHADAQLQQQRLQQQWQEGEKTLSEHRAQR
LALFGEQQIPQVREQLRAQLAACEQASHQAVEQWQKAQEQRDRLAGQLAGLQQQQQRQSE
RLQQAEQTWLEALAASEFSDEAAFSAALLDDAQRRQLQQHKERLHQRQVEASALLAQAVH
TLEQQRQQRPEGLDETQADAPALSQSLEALAQQLKTLQLRQGEVRNQLESDAARRLNQQS
LFEQISQSQQQYDDWSYLNQLIGSKEGDKFRKFAQGLTLDHLVHLANNQLGRLHGRYLLQ
RKTSDALELQVVDTWQADALRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEG
FGTLDAETLDTALDALDSLNASGKTIGVISHVEAMKERIPVQIKVKKVNGLGISRLEPQF
RLES
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctgagcctgcggctgaagaacctcaattcattgcagggcgagtggaagatc
gatttcaccgctgagccttttgccagcaatgggctgttcgccatcaccgggccaaccggc
gcgggcaaaaccaccctgctggatgccatctgcctggcgctgtaccaccagacaccgcgc
cttaacgtgacaccgagccaaaacgaactgatgacgcgccacaccgccgaatcgttggcg
gaggtcgaatttgaggtcaaaggcgtcggctaccgcgccttctggagccaacgccgcgcc
aaaaatgcgccggacggcaatctgcaagcgccaaaggtggaactggcgctgcgtgaagac
ggtaaaatcctggcggataaagtccgcgacaagctggatctgaccgccgcgatcaccggg
ctggatttcggccgcttcaccaaatcgatgatgctgtcccaggggcagttcgccgccttc
ctcaatgccgatgccaatgaccgggccgaactgctggaagagctgaccggcaccgagatc
tacggccaactttccgaacgggttttcgagcagcacaaacaggccaaagccgatctggac
gccttgcatcaacgcgccagcggcattgagctgctgaatgacgaacagcgtcagcaattg
gagagccaattagctgagctgagcgcgcaggaaaccgccctcagcgggcagacccggcaa
cagcaacaggcgctgaactggctgcaacagtggcagcgaacgcagcaccagcagcaggaa
taccaacgccagttgaacatcgtgcaacaggagcaggctgcggccaaaccgcagttgcaa
cagttggcgcgcagcgaaccggcggagaaactgcggccgctgcataacgaccgtcaccgc
tgccgcagtgagcagcaggcgctgcaacagcagatcgcccaaatggcgcagcagcaggag
catcagcttgcgcagatggcgccattgcagcaggccgtggaaaaagcgcgcgccgagcag
caggcgcaggccgagcgccagcagatccagcagcggctgatcgacgagcagatcgtcccg
ctcgaccaccagattgctcagctgcaaaaaacgcagacggaattgcagcaggcgtgcgac
aacgccgcccggcagtgccatcagcagacaacggatctggagcagttaaacgttcaacgc
agccaattgaccgcacagaccgggcaacatcaggagaagcttaacggtcttaacgcggcg
ttgatggcgcagcaacagcagcaaaatgcgctggaagcgcagtcaccgctggcggcgctg
cgccggcgtcaggccgagttggccgagctgcgcccggcacgccagcagctgttcaccctt
tcctcgctgttccgccagaccagcgagcggcttgaacaacagcgcaaagagtttaccgcc
cgtcaggcgcagcttggcgaacatgagcaacagctggaagaaacacggcggcactacaag
cagcaaaaagcgcatcagttagacgtggaaaaagcccttgagctggaaaagcgcatcgtc
agtcttgaagccgagcgcgcactgctgcaaagcggcgagccctgcccgttatgcggttcc
gccagccatccggccattgagcaatatcaggcggtaaaaccgtccgagacggcattgcgc
ctggcggaaatgcgcgtcaaaaccgaggcgctgtacacccaaggcaccgaactgcgcacc
cgttgcgaaagcctgaaggaacagcaacagcgccaacaacagcaaatagcgcaggacgag
cagcaactcgccgcccagcgccaacagtggcaaaccctcagcgcgccgctggcgtttgat
ttcgatctgcaagatgccgagcgcctgagccagtggctgaacgcctgcgacagcgaagaa
cgccagggccagcaagggctggcgcagcacgagcaggcagcacagacggtacaacaggcg
aaagatgccctggccgagctccaggcgcagcaacaacaagcacaacagcaacaagcgctg
ctggacgagcgcttcaccctgctggaaaaaaaccacgccgacgcgcagttgcaacagcag
cgcttgcaacaacagtggcaagagggcgagaaaaccctgagcgaacaccgcgcgcagcgg
ctggcgctgtttggcgaacaacagattccgcaggtgcgcgaacagctgcgtgcccaactg
gccgcctgcgagcaggccagccatcaggcggtggaacaatggcagaaagctcaggaacag
cgcgatcgcctggccggccagcttgccggcctgcaacaacagcagcaacggcagagcgag
aggctgcaacaggcggaacaaacctggctggaagcactggccgccagcgaattcagcgac
gaagccgccttcagcgccgcgctgttggatgacgcacagcgccggcaattgcagcagcat
aaagaacggttgcaccagcggcaggtggaggccagcgccctgctggcacaagcggttcat
acgctggaacaacagcggcaacagcgcccggaagggctggatgaaacccaggccgacgcg
ccagccctgagccagagcctggaggcgttggcgcagcaattgaaaaccttgcaactgcgt
cagggcgaagtgcgcaaccaattggaaagcgacgccgcacgccgtctcaatcagcaatcg
ctgtttgagcaaatcagccagagccagcagcagtacgacgactggagctacctcaaccag
ctgatcggctccaaagaaggcgataagttccgcaaatttgcccaggggctgacgctggat
cacctggtacacctggccaataaccagttggggcggctacacgggcgctacctgttgcaa
cgcaaaaccagcgacgcgctggaactgcaggtggtggatacctggcaggcggacgcgctg
cgtgacacccgcaccctgtccggcggcgaaagtttcctggtcagcctggcattggcgctg
gcgttgtctgacctggtcagccacaagaccagcatcgactcgctgtttctcgacgaaggc
ttcggcacactggatgcggaaaccctggataccgcgctggacgccctcgacagcctgaat
gcctccggtaaaaccatcggcgtgatcagccatgtcgaagcgatgaaagaacgcattccg
gtgcagattaaggtgaaaaaggtcaacggactgggtatcagccggctggagccgcagttt
cggctggaaagttag
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integrated database retrieval system
