Serratia plymuthica S13: M621_06035
Help
Entry
M621_06035 CDS
T02716
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sry
Serratia plymuthica S13
Pathway
sry03030
DNA replication
sry03430
Mismatch repair
sry03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M621_06035 (holA)
03430 Mismatch repair
M621_06035 (holA)
03440 Homologous recombination
M621_06035 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sry03032
]
M621_06035 (holA)
03400 DNA repair and recombination proteins [BR:
sry03400
]
M621_06035 (holA)
Enzymes [BR:
sry01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M621_06035 (holA)
DNA replication proteins [BR:
sry03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M621_06035 (holA)
DNA repair and recombination proteins [BR:
sry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M621_06035 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AGP43412
UniProt:
S4YDA6
LinkDB
All DBs
Position
complement(1276279..1277313)
Genome browser
AA seq
344 aa
AA seq
DB search
MIRIYPEQLAAQLREGLRACYLLSGNEPLLLQESQDLIRQAAQQQQFTEHYSISLDAHTD
WDAIFSICQAMSLFASRQTLLLIFPDNGPTAPLGEQLIKLAALLHDDILLMLRGPRLTKA
QENSAWFKALSPNGAYVSCQTPEQAQLPRWVAQRAKTMKLELDDAANQLLCYCYEGNLLA
LSQALERLSLLHPDGKLTLPRVELAVNDAAHFTPFHWLDALLAGKSKRAWHILQQMQQED
VEPVILLRTLQRELLQLLNLQRRMASVPLRTLFDQYKVWQNRRNLVTQALQRLSGAQLQQ
AVHLLTQIEITLKQDYGQSVWPELETLSMLLCGKPLATSFSDAH
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatccgtatttatcctgaacaacttgccgcgcagctccgagaggggctgcgcgcttgt
tatttattgagtggcaatgagccgttattgctgcaggaaagccaggatctgatccggcaa
gccgcgcaacaacagcagttcaccgagcactacagcatttctctcgacgcccataccgac
tgggacgccattttcagcatctgccaggccatgagcctgttcgccagccgccagaccctg
ctgcttatcttcccggataacggcccgacggccccgctcggcgagcaactgatcaagctg
gcggcgctgctgcatgacgacattttgctgatgctgcgcggccctcgcctgaccaaagcg
caggaaaacagcgcctggttcaaagcgcttagcccaaatggcgcttacgtcagttgccag
acgccggaacaagcgcagttaccccgctgggtggcacagcgcgccaaaaccatgaagctc
gagctggacgatgcggccaaccagttgctgtgctattgctacgaaggcaacctgctggcg
ctgtcgcaggcgctggaaaggctgtcgttgttgcatccggacggtaagctcacgctgcca
cgcgttgaactggcggtgaacgacgccgctcactttacgccgtttcattggctggacgcc
ctgctggcgggcaaaagcaaacgcgcctggcacattctgcagcaaatgcagcaggaagat
gtcgaaccggtgatcctgttgcgcaccctgcaacgcgaactgctgcaactgctcaacctg
caacgccgcatggcatccgtgccgctgcgcacgctgttcgatcagtacaaggtctggcaa
aaccgccgtaacctggtgacgcaggccctgcagcggctgtccggcgctcaattgcagcag
gcggtccatctgttgacgcaaattgagatcaccctgaagcaggattacggtcagtcggta
tggccggaactggaaaccctgtctatgctgctgtgcggcaaacccctggccacgagtttt
tcagatgcccactaa
DBGET
integrated database retrieval system
