Serratia plymuthica S13: M621_06365
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Entry
M621_06365 CDS
T02716
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
sry
Serratia plymuthica S13
Pathway
sry00020
Citrate cycle (TCA cycle)
sry00190
Oxidative phosphorylation
sry00650
Butanoate metabolism
sry00720
Other carbon fixation pathways
sry01100
Metabolic pathways
sry01110
Biosynthesis of secondary metabolites
sry01120
Microbial metabolism in diverse environments
sry01200
Carbon metabolism
Module
sry_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sry_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sry_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sry00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
M621_06365 (sdhA)
00650 Butanoate metabolism
M621_06365 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
M621_06365 (sdhA)
00720 Other carbon fixation pathways
M621_06365 (sdhA)
Enzymes [BR:
sry01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
M621_06365 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
GIDA
Pyr_redox_2
DAO
BEX
FAD_binding_3
Thi4
RBD_DGKtheta
Motif
Other DBs
NCBI-ProteinID:
AGP43469
UniProt:
S4YFK9
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All DBs
Position
1344697..1346463
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AA seq
588 aa
AA seq
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MKLPVREFDAVVIGAGGAGMRAALQISQAGSTCALISKVFPTRSHTVSAQGGITVALGNN
HADNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAVLELEHMGLPFSRTDEGRIYQRPFG
GQSLNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGT
TAICIETGEVVYFKAKATVLATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREG
RGCDGPWGPHVKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGI
PTKVTGQALTVNEKGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGMHLQ
ESLAEQGESRDASESDVDASLERLNRWNNTRSGEDPVEIRKALQACMQHNFSVFREGDAM
AKGLEELKEIRERLKNARLDDTSSEFNTQRIECLELDNLMETAFSTAVSANFRTESRGAH
SRFDFPERDDANWLCHSLYQPQSESMTRREVNMQPKLRPAFPPKVRSY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgccggtcagagagtttgatgctgtagttatcggtgctggtggcgcaggtatg
cgcgcggcactgcagatttctcaagcgggctccacgtgcgccctgatatccaaagtattc
ccgacccgttcccataccgtgtctgcgcagggcggcattaccgtagccctgggcaataac
cacgcagataactgggaatggcatatgtatgacacggtgaaaggttccgattacatcggt
gaccaggacgccatcgaatatatgtgtaaaaccggcccggaagcggttctggagctggaa
cacatggggctgccgttctcccgtaccgatgaaggccgcatctatcagcgtccgttcggc
ggccagtcactgaactttggtggcgagcaggcggcacgcaccgcggcggcggcggaccgt
accggtcacgccctgttgcacaccctgtatcaacagaacctgaaaaaccataccaccatt
ttctccgagtggtatgcgctggatctggtgaaaaaccaggatggcgcggtggtgggcacc
acggctatctgtatcgaaaccggtgaagtggtgtacttcaaagccaaagctaccgtactg
gcgaccggcggtgcaggccgtatttaccagtccaccaccaacgcgcatatcaacaccggt
gacggtgtcggcatggcgctgcgcgccggcgtgccggtgcaggacatggaaatgtggcag
ttccacccgaccggcatcgccggtgctggggtattggtgaccgaaggttgccgtggtgaa
ggcggttacctgctgaacaaacacggcgagcgtttcatggagcgctatgcgccgaacgcc
aaagacctggcgggccgtgatgtcgttgcccgttcgatcatgattgaaatccgcgaaggc
cgcggctgcgacggtccgtgggggccacacgtcaagctgaagctggatcacctgggtaaa
gaggtgctggaatcccgtctgccgggcattctggaattgtcgcgcactttcgcacacgtc
gatccggtaaaagagccgatcccggtgatcccgacctgtcactacatgatgggcggcata
ccgaccaaggtgaccggccaggcactgaccgtgaacgagaaaggcgaagatgtggtgatc
ccgggtctgtttgccgtgggcgaaatcgcctgcgtatcggtacacggcgccaaccgcctg
ggcggcaactcgctgctggatctggtggtattcggtcgtgctgccggtatgcatttacag
gaatctctggcggagcagggcgagagccgtgacgccagcgaatcggatgtggatgcgtcg
ctggagcgcctgaaccgctggaacaacacccgttcgggtgaggatccggtcgaaattcgc
aaggcgctgcaagcctgcatgcagcacaacttctcggtattccgtgaaggtgatgccatg
gcgaaagggctggaagagttgaaagagatccgtgaacgcctgaagaacgcacgcctggac
gatacctccagcgaattcaacacccagcgcatcgaatgcctggagttggataacctgatg
gagactgcgttttccaccgccgtgtcggccaacttccgtaccgagagccgtggggcgcac
agccgcttcgatttcccggaacgcgatgatgccaactggctgtgtcattcgctgtatcag
ccgcaatcggaaagcatgacgcgtcgtgaagtgaacatgcaaccgaagctgcgcccggca
ttcccaccgaaagtgcgttcctactga
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