Serratia plymuthica S13: M621_07130
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Entry
M621_07130 CDS
T02716
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sry
Serratia plymuthica S13
Pathway
sry00300
Lysine biosynthesis
sry00470
D-Amino acid metabolism
sry01100
Metabolic pathways
sry01110
Biosynthesis of secondary metabolites
sry01120
Microbial metabolism in diverse environments
sry01230
Biosynthesis of amino acids
Module
sry_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sry00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
M621_07130
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
M621_07130
Enzymes [BR:
sry01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
M621_07130
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GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
HicB
Motif
Other DBs
NCBI-ProteinID:
AGP43600
UniProt:
S4YGW0
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All DBs
Position
complement(1493305..1494258)
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AA seq
317 aa
AA seq
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MPPFVFIPPPKICCKLWFPLTANLTNAMTPLLFHKYHGLGNDYLVCHHSVAARLSNEQIR
ILCHPHYGIGSDGLLIDSGDNINPTLRIINPDGSEAEKSGNGLRIYARYLFDIGRVGHLP
FLVHTAGGDVQCQVDEDKHRVRVDMGRANFNPAALPALIDLPEALNYPLALAEETLSVSL
VSMGNPHCVVPVTRLDLAQVHRLGPQIENHPLFPKRTNVQLVEVIDRQTLRIGIWERGAG
FTLASGSSSCAAASVMRKLNRVDDNVSVQMPGGQLQISFSGDFHVRMRGPVHKIASLTLD
EDCFIGGEEALRQGGKH
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgccgccttttgtttttattcccccgccaaaaatctgttgtaagctgtggtttcccctt
accgctaacctgacaaatgccatgactcctctgctttttcataaatatcacgggctgggt
aatgattacctggtgtgccaccattcggtcgctgcgcggctgagcaacgagcaaatccgc
atactgtgtcatccccattacggcataggttcagacggcttgctgatcgacagcggcgac
aatatcaatcccacgctgcgcatcattaaccccgacggttcggaggccgagaaaagcggt
aacggcctgcgcatttatgcccgttacctgtttgatatcggccgcgtcggccacctgccg
tttctggtacacaccgccggtggcgacgtgcagtgccaggtcgatgaagataaacaccgg
gtccgcgtggatatgggacgtgccaatttcaatccggcagcgctgccggcgcttatcgac
ttacccgaggcgctcaactatccgctggcgctggcggaggaaaccctcagcgtatcgctg
gtatccatgggtaacccgcactgcgtggtgccggtgactcggcttgatctggcgcaggtc
caccggttggggccacagatagaaaatcacccgctgtttcccaaacgaaccaacgtgcaa
ctggtggaagtgatagatcgccagacgctgcgcatcggcatttgggaacgtggcgccggt
tttaccctggcctccggcagcagcagctgcgcggccgccagcgtcatgcgcaagctgaat
cgggtcgatgacaacgtcagcgttcagatgccgggcggccagttgcagattagcttcagc
ggggattttcacgtccgcatgcgcggaccggtgcataaaatcgccagcctgacgctggac
gaagactgctttattggcggtgaagaagccctgcgtcagggtggaaaacactga
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