KEGG   Serratia plymuthica S13: M621_07130
Entry
M621_07130        CDS       T02716                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
sry  Serratia plymuthica S13
Pathway
sry00300  Lysine biosynthesis
sry00470  D-Amino acid metabolism
sry01100  Metabolic pathways
sry01110  Biosynthesis of secondary metabolites
sry01120  Microbial metabolism in diverse environments
sry01230  Biosynthesis of amino acids
Module
sry_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:sry00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    M621_07130
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    M621_07130
Enzymes [BR:sry01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     M621_07130
SSDB
Motif
Pfam: DAP_epimerase CntK_N HicB
Other DBs
NCBI-ProteinID: AGP43600
UniProt: S4YGW0
LinkDB
Position
complement(1493305..1494258)
AA seq 317 aa
MPPFVFIPPPKICCKLWFPLTANLTNAMTPLLFHKYHGLGNDYLVCHHSVAARLSNEQIR
ILCHPHYGIGSDGLLIDSGDNINPTLRIINPDGSEAEKSGNGLRIYARYLFDIGRVGHLP
FLVHTAGGDVQCQVDEDKHRVRVDMGRANFNPAALPALIDLPEALNYPLALAEETLSVSL
VSMGNPHCVVPVTRLDLAQVHRLGPQIENHPLFPKRTNVQLVEVIDRQTLRIGIWERGAG
FTLASGSSSCAAASVMRKLNRVDDNVSVQMPGGQLQISFSGDFHVRMRGPVHKIASLTLD
EDCFIGGEEALRQGGKH
NT seq 954 nt   +upstreamnt  +downstreamnt
atgccgccttttgtttttattcccccgccaaaaatctgttgtaagctgtggtttcccctt
accgctaacctgacaaatgccatgactcctctgctttttcataaatatcacgggctgggt
aatgattacctggtgtgccaccattcggtcgctgcgcggctgagcaacgagcaaatccgc
atactgtgtcatccccattacggcataggttcagacggcttgctgatcgacagcggcgac
aatatcaatcccacgctgcgcatcattaaccccgacggttcggaggccgagaaaagcggt
aacggcctgcgcatttatgcccgttacctgtttgatatcggccgcgtcggccacctgccg
tttctggtacacaccgccggtggcgacgtgcagtgccaggtcgatgaagataaacaccgg
gtccgcgtggatatgggacgtgccaatttcaatccggcagcgctgccggcgcttatcgac
ttacccgaggcgctcaactatccgctggcgctggcggaggaaaccctcagcgtatcgctg
gtatccatgggtaacccgcactgcgtggtgccggtgactcggcttgatctggcgcaggtc
caccggttggggccacagatagaaaatcacccgctgtttcccaaacgaaccaacgtgcaa
ctggtggaagtgatagatcgccagacgctgcgcatcggcatttgggaacgtggcgccggt
tttaccctggcctccggcagcagcagctgcgcggccgccagcgtcatgcgcaagctgaat
cgggtcgatgacaacgtcagcgttcagatgccgggcggccagttgcagattagcttcagc
ggggattttcacgtccgcatgcgcggaccggtgcataaaatcgccagcctgacgctggac
gaagactgctttattggcggtgaagaagccctgcgtcagggtggaaaacactga

DBGET integrated database retrieval system