Serratia plymuthica S13: M621_08340
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Entry
M621_08340 CDS
T02716
Name
(GenBank) cystathionine beta-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
sry
Serratia plymuthica S13
Pathway
sry00260
Glycine, serine and threonine metabolism
sry00270
Cysteine and methionine metabolism
sry00450
Selenocompound metabolism
sry00670
One carbon pool by folate
sry01100
Metabolic pathways
sry01110
Biosynthesis of secondary metabolites
sry01230
Biosynthesis of amino acids
Module
sry_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
sry00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
M621_08340
00270 Cysteine and methionine metabolism
M621_08340
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
M621_08340
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
M621_08340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sry04147
]
M621_08340
Enzymes [BR:
sry01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
M621_08340
Exosome [BR:
sry04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
M621_08340
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Aminotran_5
Beta_elim_lyase
AICARFT_IMPCHas
Motif
Other DBs
NCBI-ProteinID:
AGP43803
UniProt:
S4YLX5
LinkDB
All DBs
Position
complement(1747585..1748730)
Genome browser
AA seq
381 aa
AA seq
DB search
MAKFDTLTVHAGYTPDATGAVMPAIYATSTYAQPAPGEHTGYEYSRSANPTRTALESAIA
ELEGGSRGYAFASGLAACSTVLELLDQGSHLVAVDDLYGGTYRLLEKVRSRTAGLRVTYV
SPADIAALEQAIEPETKMIWVETPTNPLLKLADLSAIAAIAKKHGLISVADNTFASPYIQ
RPLELGFDVVVHSATKYLNGHSDVVAGVAAVGDNAALAEQLGFLQNAVGGILDPFSSFLT
LRGIRTLALRMERHSNSALRIAQWLETQPQVEDVYYPGLPSHPQHALAAKQMSSFGGMIS
VRLKVDDAFARRVIKRSQLFTLAESLGGVESLISQPFSMTHASIPLEQRLKTGITPQLLR
LSVGIEDVEDLIADLQQALAE
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggccaagttcgatacgttgaccgttcatgccggatacaccccggacgccaccggcgca
gtgatgccggctatctacgccacctcgacctacgcccaaccggcgccgggcgagcacacc
ggctacgaatattcacgcagcgccaacccgacgcgcaccgcgctcgaaagcgccatcgcc
gagctggaaggcggcagccgcggctacgcctttgcctccggcctggcggcctgctcaacg
gtactggagctgctcgatcagggcagtcatctggtggcggtcgacgatctgtacggcggc
acctaccgcctgctggaaaaggtgcgcagccgtaccgccggtttacgcgtcacctatgtt
tccccggcggacattgccgcgctggaacaggcgatcgagccggaaaccaaaatgatctgg
gtagaaacgcccaccaacccgctgttgaagctggccgatctgagcgccattgccgctatc
gccaaaaagcacgggttgatcagcgtggcggacaacactttcgcctcgccgtatattcag
cggccgctggagctggggttcgatgtagtggtgcattccgccaccaaataccttaatgga
cattccgacgtggtggccggagtcgctgccgtgggtgataacgcggcgctggcggaacaa
ctgggcttcctgcaaaacgcggtgggcggcattctcgatccgttcagcagcttcctgacg
ctgcgcggtatccgtacgctggcgttgcgcatggagcgccacagcaacagcgccttgcgt
atcgcccagtggctggaaacccagccgcaggtggaggatgtttattacccaggccttccg
agccacccgcagcacgcgctggcggcgaagcaaatgagcagcttcgggggcatgatttcg
gtccggctgaaagttgatgacgcctttgcgcgccgggtcatcaagcgttcgcaactgttc
actctggcggaaagcctgggcggcgttgaaagcctgatcagccagccattcagcatgacc
catgcgtcgatcccgctggagcagcggctgaaaaccggcatcacgccgcagttgctgcgc
ctgtcggtggggattgaggatgtggaagatttgatcgccgatctgcaacaggcgctggcg
gaataa
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