Serratia plymuthica S13: M621_10070
Help
Entry
M621_10070 CDS
T02716
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
sry
Serratia plymuthica S13
Pathway
sry00541
Biosynthesis of various nucleotide sugars
sry01100
Metabolic pathways
sry01250
Biosynthesis of nucleotide sugars
Module
sry_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
sry00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
M621_10070
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sry01005
]
M621_10070
Enzymes [BR:
sry01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
M621_10070
Lipopolysaccharide biosynthesis proteins [BR:
sry01005
]
Lipid A
M621_10070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
MjAgo_N-like
Motif
Other DBs
NCBI-ProteinID:
AGP44106
UniProt:
S4YI11
LinkDB
All DBs
Position
2094434..2095288
Genome browser
AA seq
284 aa
AA seq
DB search
MKQKVVSIGDINVANDLPFVLFGGMNVLESRDLAMSICEHYVTVTQKLGIPYVFKASFDK
ANRSSIHSYRGPGLEEGMRIFEEIKKTFGVKIITDVHEASQAQPVSEVVDVIQLPAFLAR
QTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFKEGGNDQVILCDRGSNFGYDNLVVD
MLGINVMKNVTGGHPVIFDVTHALQTRDPFGAASGGRRAQVAELARAGMAVGLAGLFIEA
HPEPNSAKCDGPSALPLDKLEPFLVQMKAIDDLVKSFPELDTSN
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagaaagtagttagcattggcgacatcaacgtagcgaacgatctgccgtttgtg
ctgtttggcgggatgaacgtgctggaatcgcgcgatttggcgatgagcatctgcgagcac
tacgtcaccgtgacgcaaaaactgggcattccttacgttttcaaagcctcttttgataaa
gccaaccgttcttccattcactcgtaccgtggtccgggtctggaagaggggatgagaatc
ttcgaagaaatcaaaaaaaccttcggcgtgaaaatcatcaccgacgtgcacgaagcgtca
caggcgcagccggtatccgaagtggttgatgttatccaactgccggctttcctggcgcgt
cagaccgatctggttgaagctatggcgaaaaccggcgcggtgatcaacgtcaagaagcca
cagttcgtcagcccagggcaaatgggcaacatcgtcgacaagttcaaggaaggcggtaac
gatcaggtgatcctgtgcgatcgcggcagcaactttggctacgataacctggtggtcgac
atgcttggcatcaacgtgatgaagaacgtgaccggtggccatccggtgatcttcgacgtt
acccacgccctgcagacccgtgatccgtttggcgccgcttccggcggtcgtcgtgcgcag
gttgccgaactggcgcgcgccggtatggcggtaggtctggccggtctgttcatcgaagcg
cacccggagccgaacagtgccaagtgcgacggcccatccgcgttgccgctggacaagctg
gagccgttcctggtgcagatgaaagccatcgacgatctggtgaagagcttcccagagctg
gataccagcaactaa
DBGET
integrated database retrieval system
