Serratia plymuthica S13: M621_11135
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Entry
M621_11135 CDS
T02716
Name
(GenBank) LysR family transcriptional regulator
KO
K21698
LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
Organism
sry
Serratia plymuthica S13
Brite
KEGG Orthology (KO) [BR:
sry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sry03000
]
M621_11135
Transcription factors [BR:
sry03000
]
Prokaryotic type
Helix-turn-helix
LysR family
M621_11135
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_24
HTH_20
HTH_5
HTH_30
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AGP44288
UniProt:
S4YN64
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All DBs
Position
2308349..2309278
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AA seq
309 aa
AA seq
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MDKLNRMAVFAIVVAEGSLAGAARRLGMTPSAVSQHMRSLEKTLGVPLLHRSTRRLALTE
AGAAFYPGCEAMLSQAQQAEQRLAELRDTLVGELRIATTVGIGGRPLAEALAPLLQAHPK
LTLRVLADDRIVDMIEQRIDIALRVNRQLADASMIAHPLAEWPMVLCAAPRYLSQHGVPE
TPQDLVAHRWISGIHSGAHLDLHHQSGQQLKLRLAEGQIVSDSMTVMRGFTRSGLGISVQ
PLYEIEDELQRGELILLLPEWRPVPLRLHALTLERAMPEKNRQALRYLRDYFRRHTEKSL
ASGANGVFN
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtggataaactgaatcgaatggcggtattcgccatcgtggtggccgaagggtcgctggcc
ggtgccgcacggcggttgggcatgacaccgtcggcggtcagccagcacatgcgttcgctg
gaaaaaacgctcggcgtgccgttgttgcaccgctccacgcggcgattggcgctcaccgaa
gcgggggcggcgttctatcctggctgcgaggcgatgttgtcccaagcgcagcaggcggaa
caacggctggcggaattgcgcgacaccctggtgggtgaactgcgtatcgccaccacagtc
ggtattggcgggcgcccactggcggaggcgttggcgccgctgttgcaggcgcaccccaaa
ctgacgctgcgcgtactggcggacgaccggatcgtcgacatgatcgagcagcggatcgat
atcgcgctgcgggtcaaccgtcagttggcagatgccagtatgatcgcccacccgctggcc
gagtggccgatggtgctttgcgccgcgccgcgttatctcagccagcacggggtgccggag
acaccgcaggatttggtggcgcaccgttggatctccggcattcacagcggcgcgcatctg
gatttgcaccatcaaagtgggcagcagctcaaactacggctggcggaggggcagatcgtc
agcgacagcatgaccgtcatgcgcggctttacccgcagtggcctggggatctcggtgcag
ccgctgtatgaaattgaggatgaattgcagcgcggtgaacttatcctgctgttgcccgaa
tggcggcctgtgccgctacggctgcatgcgctgacgctggaaagggcgatgccggaaaaa
aatcggcaggcgttgcgctatttacgcgactattttcgccgccataccgaaaagtcactt
gccagcggcgccaatggcgtcttcaattag
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