KEGG   Serratia plymuthica S13: M621_16795
Entry
M621_16795        CDS       T02716                                 
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sry  Serratia plymuthica S13
Pathway
sry00010  Glycolysis / Gluconeogenesis
sry00020  Citrate cycle (TCA cycle)
sry00260  Glycine, serine and threonine metabolism
sry00280  Valine, leucine and isoleucine degradation
sry00310  Lysine degradation
sry00380  Tryptophan metabolism
sry00620  Pyruvate metabolism
sry00630  Glyoxylate and dicarboxylate metabolism
sry00640  Propanoate metabolism
sry00670  One carbon pool by folate
sry00785  Lipoic acid metabolism
sry01100  Metabolic pathways
sry01110  Biosynthesis of secondary metabolites
sry01120  Microbial metabolism in diverse environments
sry01200  Carbon metabolism
sry01210  2-Oxocarboxylic acid metabolism
sry01240  Biosynthesis of cofactors
Module
sry_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sry_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sry_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
sry_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sry00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    M621_16795
   00020 Citrate cycle (TCA cycle)
    M621_16795
   00620 Pyruvate metabolism
    M621_16795
   00630 Glyoxylate and dicarboxylate metabolism
    M621_16795
   00640 Propanoate metabolism
    M621_16795
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    M621_16795
   00280 Valine, leucine and isoleucine degradation
    M621_16795
   00310 Lysine degradation
    M621_16795
   00380 Tryptophan metabolism
    M621_16795
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    M621_16795
   00670 One carbon pool by folate
    M621_16795
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sry04147]
    M621_16795
Enzymes [BR:sry01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     M621_16795
Exosome [BR:sry04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   M621_16795
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 DAO HI0933_like FAD_oxidored FAD_binding_2 GIDA Lys_Orn_oxgnase NAD_binding_8 FAD_binding_3 3HCDH_N ANAPC4_WD40 2-Hacid_dh_C
Other DBs
NCBI-ProteinID: AGP45198
UniProt: S4YQE1
LinkDB
Position
complement(3518014..3519411)
AA seq 465 aa
MHDKYDVLVIGGGPGGYVAAIRAGQLGLRTALVEKQHLGGICLNWGCIPTKALLHGAEVA
HSIAHADQLGFSVGEVSFDLQKLVQFSRSVSQQLTGGVEYLLKKNGVTVFDGTARLRGKG
QVTVVDAKGDERDHRADHVILATGARPRALPGIVPDGERIWTYFEALQPKKLPKSLLIIG
SGAIGVEFASLYNDLGSEVTLVEVAAQILPVEDAEVSAAVRKSFERRGIQVHTQTQVTQV
QLTDAGGRCTLKNAGAEQVLEVEHVLLAAGVQPNVEDLGLEALGVELDRGFIKTDDACRT
NVFGLYAIGDVAGPPCLAHKASHEGTICVETLAGVEGVHKLDRSYVPGCTYARPQVASLG
LTEAAARASGRPLKIGKFAYQGNGKALAAGEAEGFVKTIFDAETGELLGAHMVGAQVTEQ
IQGFGIAHHLEATDESLLSVIFAHPTLSEAMHESILAAAGRPLHQ
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgcacgacaaatacgatgtactggtgatcggcggcgggccgggaggctatgttgccgcc
atccgcgccggccagctcgggctgcgtacggcgctggtggaaaaacagcatctggggggc
atctgtctgaactgggggtgcatcccaaccaaggcgctgctgcacggtgccgaggtggcg
cacagcatcgcccatgccgaccaactgggtttcagtgtcggcgaggtgagtttcgatctc
cagaaactggtgcagtttagccgctcggtgtcgcaacagttgaccggtggggtcgagtac
ctgttgaagaagaatggcgtaacggtgttcgacggcactgcccgcctgcggggcaagggg
caggtgacggtggtcgatgccaagggggacgagcgcgaccaccgggccgaccacgtgatc
ctggctaccggcgcccgcccacgtgcgttgccggggatcgtaccggatggcgagcggatc
tggacctacttcgaggcattgcaacccaaaaaattgccgaaatccttgctgatcatcggt
tccggcgccatcggcgtcgagttcgccagcctctacaacgatctcggcagcgaagtgacg
ctggtggaggtggcggcgcagatactgccggttgaagacgcagaagtctcggcggcggtg
cgcaagtcgttcgagaggcgcggcattcaggtgcatacccagacgcaggtaacgcaggtg
cagctcacggacgcgggagggcgttgcacgttgaaaaatgccggcgccgaacaggtgctg
gaggtagaacatgtgctgttggcggccggcgtccagcctaatgtcgaagacctcgggctg
gaggcgctgggcgtcgagctggatcgcggttttatcaagacggatgacgcctgccgcacc
aatgtcttcggcctttacgctatcggcgacgtcgccggcccgccgtgcctggcgcacaag
gccagccacgaagggacgatctgcgtcgagacgctggccggcgtcgaaggcgtgcacaag
cttgaccgtagttatgtgcccggttgtacctatgcccggccgcaggttgccagtctgggc
ctgaccgaggcggcggcgcgtgccagtggacggccactcaagatcggtaagttcgcctat
cagggcaatggcaaggcgctggccgccggtgaggcggagggcttcgtcaagacgattttc
gatgccgaaaccggcgagctgttgggggcgcacatggttggcgcacaggtcaccgaacag
atccagggcttcggtatcgcccatcatctggaggccacggacgagagcctgctgtcggtc
atttttgcgcatccgacgctctctgaagccatgcatgaatcgatcctcgcggccgctggc
cgacctctgcatcaatag

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